RNA–Protein interactions for RNA: ENST00000640476.1

CROCCP2-207, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 5

Gene CROCCP2, Length 1,750 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-207ENST00000640476 PKD1P98161 4303 aa13.35□□□□□ -0.27
CROCCP2-207ENST00000640476 H3BRM9 83 aa13.35□□□□□ -0.27
CROCCP2-207ENST00000640476 LEPROTO15243 131 aa13.35□□□□□ -0.27
CROCCP2-207ENST00000640476 GCSHP23434 173 aa13.35□□□□□ -0.27
CROCCP2-207ENST00000640476 CEND1Q8N111 149 aa13.35□□□□□ -0.27
CROCCP2-207ENST00000640476 IGLV5-45A0A087WSX0 123 aa13.34□□□□□ -0.27
CROCCP2-207ENST00000640476 COX7A2LO14548 114 aa13.34□□□□□ -0.27
CROCCP2-207ENST00000640476 PLEKHB2Q96CS7 222 aa13.33□□□□□ -0.28
CROCCP2-207ENST00000640476 RMI2Q96E14 147 aa13.33□□□□□ -0.28
CROCCP2-207ENST00000640476 HIST1H4GQ99525 98 aa13.33□□□□□ -0.28
CROCCP2-207ENST00000640476 A0A087WZ39 114 aa13.32□□□□□ -0.28
CROCCP2-207ENST00000640476 J3QQQ9 107 aa13.32□□□□□ -0.28
CROCCP2-207ENST00000640476 LGALS3P17931 250 aaKnown RBP13.32□□□□□ -0.28
CROCCP2-207ENST00000640476 C15orf56Q8N910 161 aa13.32□□□□□ -0.28
CROCCP2-207ENST00000640476 SCGB1D4Q6XE38 83 aa13.32□□□□□ -0.28
CROCCP2-207ENST00000640476 FUSP35637 526 aaKnown RBP eCLIP13.31□□□□□ -0.28
CROCCP2-207ENST00000640476 PTTG1IPP53801 180 aa13.31□□□□□ -0.28
CROCCP2-207ENST00000640476 TNP2Q05952 138 aa13.31□□□□□ -0.28
CROCCP2-207ENST00000640476 HIGD2BQ4VC39 106 aa13.31□□□□□ -0.28
CROCCP2-207ENST00000640476 Q6ZVH6 145 aa13.31□□□□□ -0.28
CROCCP2-207ENST00000640476 LRCOL1A6NCL2 159 aa13.3□□□□□ -0.28
CROCCP2-207ENST00000640476 SMIM1B2RUZ4 78 aa13.3□□□□□ -0.28
CROCCP2-207ENST00000640476 USP17L23D6RBM5 183 aa13.3□□□□□ -0.28
CROCCP2-207ENST00000640476 SMIM13P0DJ93 91 aa13.3□□□□□ -0.28
CROCCP2-207ENST00000640476 MALP21145 153 aa13.3□□□□□ -0.28
CROCCP2-207ENST00000640476 FXYD2P54710 66 aa13.3□□□□□ -0.28
CROCCP2-207ENST00000640476 TSPEAR-AS2P59090 65 aa13.28□□□□□ -0.28
CROCCP2-207ENST00000640476 C9orf118A6NHY6 69 aa13.27□□□□□ -0.28
CROCCP2-207ENST00000640476 VAMP3Q15836 100 aa13.27□□□□□ -0.28
CROCCP2-207ENST00000640476 UBE2V1Q13404 147 aa13.27□□□□□ -0.29
CROCCP2-207ENST00000640476 TOMM7Q9P0U1 55 aa13.27□□□□□ -0.29
CROCCP2-207ENST00000640476 PKHD1P08F94 4074 aa13.27□□□□□ -0.29
CROCCP2-207ENST00000640476 SPANXB1Q9NS25 103 aaPredicted RBP13.26□□□□□ -0.29
CROCCP2-207ENST00000640476 SRSF9Q13242 221 aaKnown RBP eCLIP13.25□□□□□ -0.298e-9■□□□□ 10.3
CROCCP2-207ENST00000640476 DNAH5Q8TE73 4624 aa13.25□□□□□ -0.29
CROCCP2-207ENST00000640476 IGHV1-58A0A0C4DH39 117 aa13.25□□□□□ -0.29
CROCCP2-207ENST00000640476 A0A087WTM6 91 aa13.24□□□□□ -0.29
CROCCP2-207ENST00000640476 SLPIP03973 132 aa13.24□□□□□ -0.29
CROCCP2-207ENST00000640476 KIAA0087Q14695 138 aa13.24□□□□□ -0.29
CROCCP2-207ENST00000640476 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.23□□□□□ -0.29
CROCCP2-207ENST00000640476 IGLV5-39A0A0G2JS06 123 aa13.23□□□□□ -0.29
CROCCP2-207ENST00000640476 TMEM238LA0A1B0GVL6 79 aa13.23□□□□□ -0.29
CROCCP2-207ENST00000640476 A6NJY4 79 aa13.23□□□□□ -0.29
CROCCP2-207ENST00000640476 C2orf82Q6UX34 121 aa13.23□□□□□ -0.29
CROCCP2-207ENST00000640476 NHP2Q9NX24 153 aaKnown RBP13.23□□□□□ -0.29
CROCCP2-207ENST00000640476 SPAG11BQ08648 103 aa13.22□□□□□ -0.29
CROCCP2-207ENST00000640476 RAB37Q96AX2 223 aa13.22□□□□□ -0.29
CROCCP2-207ENST00000640476 C10orf25Q5T742 122 aa13.2□□□□□ -0.3
CROCCP2-207ENST00000640476 NTN5Q8WTR8 489 aaPredicted RBP13.2□□□□□ -0.3
CROCCP2-207ENST00000640476 GVQW2A0A096LPI5 108 aaPredicted RBP13.2□□□□□ -0.3
CROCCP2-207ENST00000640476 A0A1B0GWB2 263 aa13.2□□□□□ -0.3
CROCCP2-207ENST00000640476 H3BUT2 72 aa13.2□□□□□ -0.3
CROCCP2-207ENST00000640476 COX7B2Q8TF08 81 aa13.2□□□□□ -0.3
CROCCP2-207ENST00000640476 APOMO95445 188 aa13.19□□□□□ -0.3
CROCCP2-207ENST00000640476 LINC01561Q8N1V8 128 aa13.18□□□□□ -0.3
CROCCP2-207ENST00000640476 Q8N814 137 aa13.18□□□□□ -0.3
CROCCP2-207ENST00000640476 ZNF561-AS1K7EIQ3 104 aa13.17□□□□□ -0.3
CROCCP2-207ENST00000640476 LINC01620Q4KN68 170 aa13.17□□□□□ -0.3
CROCCP2-207ENST00000640476 UNQ6190/PRO20217Q6UXQ8 127 aa13.17□□□□□ -0.3
CROCCP2-207ENST00000640476 TMEM238C9JI98 176 aa13.17□□□□□ -0.3
CROCCP2-207ENST00000640476 C6orf226Q5I0X4 101 aa13.17□□□□□ -0.3
CROCCP2-207ENST00000640476 CFAP161Q6P656 301 aa13.17□□□□□ -0.3
CROCCP2-207ENST00000640476 A0A1W2PPM0 123 aa13.16□□□□□ -0.3
CROCCP2-207ENST00000640476 GTF2H5Q6ZYL4 71 aa13.16□□□□□ -0.3
CROCCP2-207ENST00000640476 Q8IZM0 81 aa13.16□□□□□ -0.3
CROCCP2-207ENST00000640476 NDUFA12Q9UI09 145 aa13.16□□□□□ -0.3
CROCCP2-207ENST00000640476 A0A0J9YXY3 114 aa13.15□□□□□ -0.3
CROCCP2-207ENST00000640476 K7ERJ3 54 aa13.15□□□□□ -0.3
CROCCP2-207ENST00000640476 PRSS2P07478 247 aa13.15□□□□□ -0.3
CROCCP2-207ENST00000640476 KRTAP10-2P60368 255 aa13.15□□□□□ -0.3
CROCCP2-207ENST00000640476 C9orf116Q5BN46 136 aaPredicted RBP13.15□□□□□ -0.3
CROCCP2-207ENST00000640476 ZNF625Q96I27 306 aaPredicted RBP13.15□□□□□ -0.3
CROCCP2-207ENST00000640476 GAGE10A6NGK3 116 aa13.15□□□□□ -0.31
CROCCP2-207ENST00000640476 Q6ZRU5 148 aa13.15□□□□□ -0.31
CROCCP2-207ENST00000640476 FABP2P12104 132 aa13.14□□□□□ -0.31
CROCCP2-207ENST00000640476 CAMK2N2Q96S95 79 aa13.12□□□□□ -0.31
CROCCP2-207ENST00000640476 NAA38Q9BRA0 125 aaKnown RBP13.12□□□□□ -0.31
CROCCP2-207ENST00000640476 K7EP34 96 aa13.11□□□□□ -0.31
CROCCP2-207ENST00000640476 NDUFA1O15239 70 aa13.11□□□□□ -0.31
CROCCP2-207ENST00000640476 TIMM17BO60830 172 aa13.11□□□□□ -0.31
CROCCP2-207ENST00000640476 CKS1BP61024 79 aa13.11□□□□□ -0.31
CROCCP2-207ENST00000640476 RPL24P83731 157 aaKnown RBP13.1□□□□□ -0.31
CROCCP2-207ENST00000640476 C6orf48Q9UBA6 75 aa13.1□□□□□ -0.31
CROCCP2-207ENST00000640476 SYCNQ0VAF6 134 aa13.09□□□□□ -0.31
CROCCP2-207ENST00000640476 SPANXDQ9BXN6 97 aa13.09□□□□□ -0.31
CROCCP2-207ENST00000640476 SPANXCQ9NY87 97 aa13.09□□□□□ -0.31
CROCCP2-207ENST00000640476 SPCS1Q9Y6A9 102 aa13.09□□□□□ -0.31
CROCCP2-207ENST00000640476 C14orf177Q52M58 125 aa13.08□□□□□ -0.32
CROCCP2-207ENST00000640476 C2orf48Q96LS8 159 aa13.08□□□□□ -0.32
CROCCP2-207ENST00000640476 LITAFQ99732 161 aa13.08□□□□□ -0.32
CROCCP2-207ENST00000640476 A0A0U1RRA0 63 aa13.07□□□□□ -0.32
CROCCP2-207ENST00000640476 MUSTN1Q8IVN3 82 aa13.07□□□□□ -0.32
CROCCP2-207ENST00000640476 CIRBPQ14011 172 aaKnown RBP13.07□□□□□ -0.32
CROCCP2-207ENST00000640476 CARD19Q96LW7 228 aa13.07□□□□□ -0.32
CROCCP2-207ENST00000640476 A0A1B0GVY2 172 aa13.06□□□□□ -0.32
CROCCP2-207ENST00000640476 LINC00336Q6ZUF6 198 aa13.06□□□□□ -0.32
CROCCP2-207ENST00000640476 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.05□□□□□ -0.32
CROCCP2-207ENST00000640476 CFC1BP0CG36 223 aa13.05□□□□□ -0.32
CROCCP2-207ENST00000640476 CFC1P0CG37 223 aa13.05□□□□□ -0.32
CROCCP2-207ENST00000640476 CNBPP62633 177 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms