RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 MRPL23Q16540 153 aaKnown RBP11.57□□□□□ -0.56
HNRNPU-228ENST00000640306 DNAL4O96015 105 aa11.56□□□□□ -0.56
HNRNPU-228ENST00000640306 SLPIP03973 132 aa11.56□□□□□ -0.56
HNRNPU-228ENST00000640306 MALP21145 153 aa11.56□□□□□ -0.56
HNRNPU-228ENST00000640306 RPL28P46779 137 aaKnown RBP11.56□□□□□ -0.56
HNRNPU-228ENST00000640306 FLNBO75369 2602 aaKnown RBP11.56□□□□□ -0.56
HNRNPU-228ENST00000640306 TRBV7-7A0A0K0K1E9 115 aa11.55□□□□□ -0.56
HNRNPU-228ENST00000640306 IGLV1-51P01701 117 aa11.55□□□□□ -0.56
HNRNPU-228ENST00000640306 C6orf226Q5I0X4 101 aa11.55□□□□□ -0.56
HNRNPU-228ENST00000640306 C14orf132Q9NPU4 83 aa11.55□□□□□ -0.56
HNRNPU-228ENST00000640306 LECT2O14960 151 aa11.54□□□□□ -0.56
HNRNPU-228ENST00000640306 GYPEP15421 78 aa11.53□□□□□ -0.56
HNRNPU-228ENST00000640306 LINC00959A0A1B0GUT2 108 aa11.53□□□□□ -0.56
HNRNPU-228ENST00000640306 ACYP1P07311 99 aa11.53□□□□□ -0.56
HNRNPU-228ENST00000640306 PRR3P79522 188 aaKnown RBP11.53□□□□□ -0.56
HNRNPU-228ENST00000640306 OVOL2Q9BRP0 275 aa11.53□□□□□ -0.56
HNRNPU-228ENST00000640306 A0A087WZ39 114 aa11.52□□□□□ -0.57
HNRNPU-228ENST00000640306 DEFB4AO15263 64 aa11.52□□□□□ -0.57
HNRNPU-228ENST00000640306 PF4P02776 101 aa11.51□□□□□ -0.57
HNRNPU-228ENST00000640306 LINC00643Q86TS7 51 aa11.51□□□□□ -0.57
HNRNPU-228ENST00000640306 FAM222AQ5U5X8 452 aa11.5□□□□□ -0.57
HNRNPU-228ENST00000640306 NCR3O14931 201 aa11.5□□□□□ -0.57
HNRNPU-228ENST00000640306 Q8N3U1 123 aa11.5□□□□□ -0.57
HNRNPU-228ENST00000640306 IGLV10-54A0A075B6I4 117 aa11.49□□□□□ -0.57
HNRNPU-228ENST00000640306 IBA57-AS1B1ANH7 110 aa11.49□□□□□ -0.57
HNRNPU-228ENST00000640306 SMIM20Q8N5G0 67 aa11.49□□□□□ -0.57
HNRNPU-228ENST00000640306 INAFM2P0DMQ5 153 aa11.49□□□□□ -0.57
HNRNPU-228ENST00000640306 SDIM1Q6ZPB5 146 aa11.48□□□□□ -0.57
HNRNPU-228ENST00000640306 LY6G6DO95868 133 aa11.47□□□□□ -0.57
HNRNPU-228ENST00000640306 CMC4P56277 68 aaPredicted RBP11.47□□□□□ -0.57
HNRNPU-228ENST00000640306 IGKV3D-7A0A0C4DH55 119 aa11.46□□□□□ -0.57
HNRNPU-228ENST00000640306 HIVEP1P15822 2718 aa11.46□□□□□ -0.57
HNRNPU-228ENST00000640306 LINC00482Q8N8I6 264 aa11.46□□□□□ -0.57
HNRNPU-228ENST00000640306 C9orf116Q5BN46 136 aaPredicted RBP11.45□□□□□ -0.58
HNRNPU-228ENST00000640306 RNASE1P07998 156 aaKnown RBP11.45□□□□□ -0.58
HNRNPU-228ENST00000640306 SS18Q15532 418 aa11.45□□□□□ -0.58
HNRNPU-228ENST00000640306 LINC00269Q8N2A0 174 aa11.44□□□□□ -0.58
HNRNPU-228ENST00000640306 SPATA3Q8NHX4 192 aa11.43□□□□□ -0.58
HNRNPU-228ENST00000640306 H0YGX0 51 aa11.43□□□□□ -0.58
HNRNPU-228ENST00000640306 IMUPQ9GZP8 106 aa11.43□□□□□ -0.58
HNRNPU-228ENST00000640306 LINC00846Q9NV44 126 aa11.42□□□□□ -0.58
HNRNPU-228ENST00000640306 INAFM1C9JVW0 142 aa11.42□□□□□ -0.58
HNRNPU-228ENST00000640306 LINC00526Q96FQ7 95 aa11.41□□□□□ -0.58
HNRNPU-228ENST00000640306 FAM110AQ9BQ89 295 aa11.41□□□□□ -0.58
HNRNPU-228ENST00000640306 A0A087WVE0 104 aa11.41□□□□□ -0.58
HNRNPU-228ENST00000640306 KRTAP10-3P60369 221 aa11.41□□□□□ -0.58
HNRNPU-228ENST00000640306 C9orf153Q5TBE3 101 aa11.4□□□□□ -0.58
HNRNPU-228ENST00000640306 CFAP161Q6P656 301 aa11.4□□□□□ -0.58
HNRNPU-228ENST00000640306 PPDPFQ9H3Y8 114 aa11.4□□□□□ -0.58
HNRNPU-228ENST00000640306 C16orf95Q9H693 158 aa11.4□□□□□ -0.58
HNRNPU-228ENST00000640306 X6R8D5 127 aa11.4□□□□□ -0.58
HNRNPU-228ENST00000640306 NSD1Q96L73 2696 aaPredicted RBP11.4□□□□□ -0.59
HNRNPU-228ENST00000640306 ANGP03950 147 aaKnown RBP11.39□□□□□ -0.59
HNRNPU-228ENST00000640306 DEFB135Q30KP9 77 aa11.39□□□□□ -0.59
HNRNPU-228ENST00000640306 PRO0255Q9UI72 69 aa11.39□□□□□ -0.59
HNRNPU-228ENST00000640306 TENM1Q9UKZ4 2725 aa11.39□□□□□ -0.59
HNRNPU-228ENST00000640306 KIR2DL5BQ8NHK3 375 aa11.38□□□□□ -0.59
HNRNPU-228ENST00000640306 KLK5Q9Y337 293 aaPredicted RBP11.38□□□□□ -0.59
HNRNPU-228ENST00000640306 CXCL5P42830 114 aa11.38□□□□□ -0.59
HNRNPU-228ENST00000640306 HILS1P60008 231 aa11.38□□□□□ -0.59
HNRNPU-228ENST00000640306 Q8IZM0 81 aa11.38□□□□□ -0.59
HNRNPU-228ENST00000640306 ORMDL1Q9P0S3 153 aa11.38□□□□□ -0.59
HNRNPU-228ENST00000640306 HTN3P15516 51 aa11.37□□□□□ -0.59
HNRNPU-228ENST00000640306 CHCHD10Q8WYQ3 142 aaPredicted RBP11.37□□□□□ -0.59
HNRNPU-228ENST00000640306 NANOS2P60321 138 aaKnown RBP11.36□□□□□ -0.59
HNRNPU-228ENST00000640306 C3orf22Q8N5N4 141 aa11.36□□□□□ -0.59
HNRNPU-228ENST00000640306 Q8NDZ9 215 aa11.36□□□□□ -0.59
HNRNPU-228ENST00000640306 A0A1B0GUV1 79 aa11.35□□□□□ -0.59
HNRNPU-228ENST00000640306 C6orf223Q8N319 242 aa11.34□□□□□ -0.59
HNRNPU-228ENST00000640306 KIAA0087Q14695 138 aa11.34□□□□□ -0.59
HNRNPU-228ENST00000640306 F8P00451 2351 aa11.34□□□□□ -0.59
HNRNPU-228ENST00000640306 REG3AQ06141 175 aa11.33□□□□□ -0.6
HNRNPU-228ENST00000640306 ATRQ13535 2644 aa11.33□□□□□ -0.6
HNRNPU-228ENST00000640306 TRRAPQ9Y4A5 3859 aa11.33□□□□□ -0.6
HNRNPU-228ENST00000640306 LINC00612Q8N6U2 182 aa11.33□□□□□ -0.6
HNRNPU-228ENST00000640306 WFDC9Q8NEX5 89 aa11.33□□□□□ -0.6
HNRNPU-228ENST00000640306 OBSCN-AS1Q96MR7 158 aa11.33□□□□□ -0.6
HNRNPU-228ENST00000640306 C6orf99Q4VX62 202 aa11.32□□□□□ -0.6
HNRNPU-228ENST00000640306 C10orf25Q5T742 122 aa11.32□□□□□ -0.6
HNRNPU-228ENST00000640306 CD164L2Q6UWJ8 174 aa11.32□□□□□ -0.6
HNRNPU-228ENST00000640306 UQCRQO14949 82 aa11.31□□□□□ -0.6
HNRNPU-228ENST00000640306 HIST1H4AP62805 103 aaKnown RBP11.31□□□□□ -0.6
HNRNPU-228ENST00000640306 Q8N814 137 aa11.31□□□□□ -0.6
HNRNPU-228ENST00000640306 CELA1Q9UNI1 258 aa11.3□□□□□ -0.6
HNRNPU-228ENST00000640306 A0A1B0GX51 115 aa11.3□□□□□ -0.6
HNRNPU-228ENST00000640306 UNQ6190/PRO20217Q6UXQ8 127 aa11.3□□□□□ -0.6
HNRNPU-228ENST00000640306 DAD1P61803 113 aa11.29□□□□□ -0.6
HNRNPU-228ENST00000640306 S100A7L2Q5SY68 101 aa11.29□□□□□ -0.6
HNRNPU-228ENST00000640306 IGHV4-28A0A0C4DH34 117 aa11.29□□□□□ -0.6
HNRNPU-228ENST00000640306 hADV29S1A0JD25 119 aa11.29□□□□□ -0.6
HNRNPU-228ENST00000640306 CYSTM1Q9H1C7 97 aa11.29□□□□□ -0.6
HNRNPU-228ENST00000640306 TEP1Q99973 2627 aaKnown RBP11.28□□□□□ -0.6
HNRNPU-228ENST00000640306 COX7CP15954 63 aa11.28□□□□□ -0.6
HNRNPU-228ENST00000640306 TMEM126AQ9H061 195 aa11.28□□□□□ -0.6
HNRNPU-228ENST00000640306 C2orf48Q96LS8 159 aa11.28□□□□□ -0.6
HNRNPU-228ENST00000640306 LINC01561Q8N1V8 128 aa11.27□□□□□ -0.61
HNRNPU-228ENST00000640306 CCKP06307 115 aa11.26□□□□□ -0.61
HNRNPU-228ENST00000640306 RPL18AQ02543 176 aaKnown RBP11.26□□□□□ -0.61
HNRNPU-228ENST00000640306 Q6JHZ5 121 aa11.26□□□□□ -0.61
HNRNPU-228ENST00000640306 ATOX1O00244 68 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms