RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.43□□□□□ -1.54
SCARB2-220ENST00000640076 IGKV2-29A2NJV5 120 aaPredicted RBP5.43□□□□□ -1.54
SCARB2-220ENST00000640076 ESRGQ1W209 222 aa5.43□□□□□ -1.54
SCARB2-220ENST00000640076 LELP1Q5T871 98 aa5.43□□□□□ -1.54
SCARB2-220ENST00000640076 AMMECR1LQ6DCA0 310 aa5.43□□□□□ -1.54
SCARB2-220ENST00000640076 PLECQ15149 4684 aaKnown RBP5.43□□□□□ -1.54
SCARB2-220ENST00000640076 LINC01549A6NIU2 74 aa5.42□□□□□ -1.54
SCARB2-220ENST00000640076 LEPROTL1O95214 131 aa5.42□□□□□ -1.54
SCARB2-220ENST00000640076 FABP4P15090 132 aa5.42□□□□□ -1.54
SCARB2-220ENST00000640076 LINC00173Q6ZV60 143 aa5.42□□□□□ -1.54
SCARB2-220ENST00000640076 KLK5Q9Y337 293 aaPredicted RBP5.42□□□□□ -1.54
SCARB2-220ENST00000640076 TRAV8-3A0A0A6YYJ7 113 aa5.42□□□□□ -1.54
SCARB2-220ENST00000640076 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
SCARB2-220ENST00000640076 IGIPA6NJ69 53 aa5.42□□□□□ -1.54
SCARB2-220ENST00000640076 H7C423 109 aa5.42□□□□□ -1.54
SCARB2-220ENST00000640076 PSMB2P49721 201 aa5.42□□□□□ -1.54
SCARB2-220ENST00000640076 MUC7Q8TAX7 377 aa5.42□□□□□ -1.54
SCARB2-220ENST00000640076 CHCHD5Q9BSY4 110 aa5.42□□□□□ -1.54
SCARB2-220ENST00000640076 APLNQ9ULZ1 77 aa5.42□□□□□ -1.54
SCARB2-220ENST00000640076 UBE2L6O14933 153 aa5.41□□□□□ -1.54
SCARB2-220ENST00000640076 FAM19A3Q7Z5A8 133 aa5.41□□□□□ -1.54
SCARB2-220ENST00000640076 SCGB3A1Q96QR1 104 aa5.41□□□□□ -1.54
SCARB2-220ENST00000640076 TIMM21Q9BVV7 248 aa5.41□□□□□ -1.54
SCARB2-220ENST00000640076 UBE2D4Q9Y2X8 147 aa5.41□□□□□ -1.54
SCARB2-220ENST00000640076 PYGO1Q9Y3Y4 419 aa5.41□□□□□ -1.54
SCARB2-220ENST00000640076 IGHV3OR16-9A0A0B4J2B5 98 aa5.4□□□□□ -1.54
SCARB2-220ENST00000640076 PRR3P79522 188 aaKnown RBP5.4□□□□□ -1.54
SCARB2-220ENST00000640076 XP32Q5T750 250 aa5.4□□□□□ -1.54
SCARB2-220ENST00000640076 IFI27L1Q96BM0 104 aa5.4□□□□□ -1.54
SCARB2-220ENST00000640076 TIMM17AQ99595 171 aa5.4□□□□□ -1.54
SCARB2-220ENST00000640076 OCR1Q9BZK8 76 aa5.4□□□□□ -1.54
SCARB2-220ENST00000640076 FAM236AA0A1B0GUQ0 79 aa5.4□□□□□ -1.55
SCARB2-220ENST00000640076 FAM236BA0A1B0GV22 79 aa5.4□□□□□ -1.55
SCARB2-220ENST00000640076 CCL18P55774 89 aa5.4□□□□□ -1.55
SCARB2-220ENST00000640076 Q6Q795 121 aa5.4□□□□□ -1.55
SCARB2-220ENST00000640076 FAM104AQ969W3 186 aa5.4□□□□□ -1.55
SCARB2-220ENST00000640076 TMEM141Q96I45 108 aa5.4□□□□□ -1.55
SCARB2-220ENST00000640076 LINC00588Q9Y4M8 146 aa5.4□□□□□ -1.55
SCARB2-220ENST00000640076 LYSTQ99698 3801 aa5.39□□□□□ -1.55
SCARB2-220ENST00000640076 IGLV4-3A0A075B6K6 122 aa5.39□□□□□ -1.55
SCARB2-220ENST00000640076 TMEM262E9PQX1 116 aa5.39□□□□□ -1.55
SCARB2-220ENST00000640076 MPV17L2Q567V2 206 aa5.39□□□□□ -1.55
SCARB2-220ENST00000640076 REG3GQ6UW15 175 aa5.39□□□□□ -1.55
SCARB2-220ENST00000640076 WFDC10BQ8IUB3 73 aa5.39□□□□□ -1.55
SCARB2-220ENST00000640076 OPRPNQ99935 248 aaPredicted RBP5.39□□□□□ -1.55
SCARB2-220ENST00000640076 MRPS16Q9Y3D3 137 aaKnown RBP5.39□□□□□ -1.55
SCARB2-220ENST00000640076 IGLV4-60A0A075B6I1 120 aa5.38□□□□□ -1.55
SCARB2-220ENST00000640076 SMIM26A0A096LP01 95 aa5.38□□□□□ -1.55
SCARB2-220ENST00000640076 A0A1B0GUV1 79 aa5.38□□□□□ -1.55
SCARB2-220ENST00000640076 APOMO95445 188 aa5.38□□□□□ -1.55
SCARB2-220ENST00000640076 C3orf79P0CE67 100 aa5.38□□□□□ -1.55
SCARB2-220ENST00000640076 KRTDAPP60985 99 aa5.38□□□□□ -1.55
SCARB2-220ENST00000640076 MRPS36P82909 103 aaKnown RBP5.38□□□□□ -1.55
SCARB2-220ENST00000640076 Q6ZUT4 128 aa5.38□□□□□ -1.55
SCARB2-220ENST00000640076 Q8N3U1 123 aa5.38□□□□□ -1.55
SCARB2-220ENST00000640076 Q8N976 141 aa5.38□□□□□ -1.55
SCARB2-220ENST00000640076 VPS13DQ5THJ4 4388 aa5.38□□□□□ -1.55
SCARB2-220ENST00000640076 VAMP8Q9BV40 100 aa5.38□□□□□ -1.55
SCARB2-220ENST00000640076 CDC42SE2Q9NRR3 84 aa5.38□□□□□ -1.55
SCARB2-220ENST00000640076 SYS1-DBNDD2H3BUS1 97 aa5.37□□□□□ -1.55
SCARB2-220ENST00000640076 HERVK_113P63121 156 aa5.37□□□□□ -1.55
SCARB2-220ENST00000640076 RNASE13Q5GAN3 156 aaKnown RBP5.37□□□□□ -1.55
SCARB2-220ENST00000640076 ZC2HC1BQ5TFG8 222 aa5.37□□□□□ -1.55
SCARB2-220ENST00000640076 SPATA12Q7Z6I5 190 aa5.37□□□□□ -1.55
SCARB2-220ENST00000640076 PRR15Q8IV56 129 aa5.37□□□□□ -1.55
SCARB2-220ENST00000640076 LINC00337Q8N6G1 96 aa5.37□□□□□ -1.55
SCARB2-220ENST00000640076 UPK3BQ9BT76 320 aa5.37□□□□□ -1.55
SCARB2-220ENST00000640076 DNAH1Q9P2D7 4330 aa5.37□□□□□ -1.55
SCARB2-220ENST00000640076 C6orf99Q4VX62 202 aa5.36□□□□□ -1.55
SCARB2-220ENST00000640076 NTN5Q8WTR8 489 aaPredicted RBP5.36□□□□□ -1.55
SCARB2-220ENST00000640076 AMELXQ99217 191 aa5.36□□□□□ -1.55
SCARB2-220ENST00000640076 TRAV12-1A0A0B4J245 112 aa5.36□□□□□ -1.55
SCARB2-220ENST00000640076 RPL37AP8A6NKH3 93 aa5.36□□□□□ -1.55
SCARB2-220ENST00000640076 DNAH10OSP0CZ25 163 aa5.36□□□□□ -1.55
SCARB2-220ENST00000640076 MP68P56378 58 aa5.36□□□□□ -1.55
SCARB2-220ENST00000640076 LINC01556Q5JQF7 62 aa5.36□□□□□ -1.55
SCARB2-220ENST00000640076 CASC10Q5T4H9 136 aa5.36□□□□□ -1.55
SCARB2-220ENST00000640076 TEX43Q6ZNM6 134 aa5.36□□□□□ -1.55
SCARB2-220ENST00000640076 C3orf22Q8N5N4 141 aa5.36□□□□□ -1.55
SCARB2-220ENST00000640076 BRK1Q8WUW1 75 aa5.36□□□□□ -1.55
SCARB2-220ENST00000640076 A0A0J9YXV3 536 aa5.35□□□□□ -1.55
SCARB2-220ENST00000640076 C3orf84H3BNL1 204 aa5.35□□□□□ -1.55
SCARB2-220ENST00000640076 IGHV3-30P01768 117 aa5.35□□□□□ -1.55
SCARB2-220ENST00000640076 IGHV3-33P01772 117 aa5.35□□□□□ -1.55
SCARB2-220ENST00000640076 ANGP03950 147 aaKnown RBP5.35□□□□□ -1.55
SCARB2-220ENST00000640076 IGHV3-30-3P0DP02 117 aa5.35□□□□□ -1.55
SCARB2-220ENST00000640076 IGHV3-30-5P0DP03 117 aa5.35□□□□□ -1.55
SCARB2-220ENST00000640076 IFITM1P13164 125 aa5.35□□□□□ -1.55
SCARB2-220ENST00000640076 LINC01545Q5VT33 79 aa5.35□□□□□ -1.55
SCARB2-220ENST00000640076 UBE2DNLQ8IWF7 75 aa5.35□□□□□ -1.55
SCARB2-220ENST00000640076 LGALS9CQ6DKI2 356 aa5.35□□□□□ -1.55
SCARB2-220ENST00000640076 PMCHL2Q9BQD1 86 aa5.35□□□□□ -1.55
SCARB2-220ENST00000640076 IMUPQ9GZP8 106 aa5.35□□□□□ -1.55
SCARB2-220ENST00000640076 MRPL35Q9NZE8 188 aaKnown RBP5.35□□□□□ -1.55
SCARB2-220ENST00000640076 TRAV9-2A0A087WT02 112 aa5.34□□□□□ -1.55
SCARB2-220ENST00000640076 LINC00269Q8N2A0 174 aa5.34□□□□□ -1.55
SCARB2-220ENST00000640076 PRR34Q9NV39 138 aa5.34□□□□□ -1.55
SCARB2-220ENST00000640076 KLK12Q9UKR0 248 aa5.34□□□□□ -1.55
SCARB2-220ENST00000640076 IGLV4-69A0A075B6H9 119 aa5.33□□□□□ -1.56
SCARB2-220ENST00000640076 TRAV13-1A0A0B4J241 112 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms