RNA–Protein interactions for RNA: ENST00000638878.1

PAX6-242, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-242ENST00000638878 TRBV7-7A0A0K0K1E9 115 aa6.96□□□□□ -1.29
PAX6-242ENST00000638878 TEX49A0A1B0GTD5 131 aa6.96□□□□□ -1.29
PAX6-242ENST00000638878 IGHV3-53P01767 116 aa6.96□□□□□ -1.29
PAX6-242ENST00000638878 HERVK_113P63121 156 aa6.96□□□□□ -1.29
PAX6-242ENST00000638878 ADAMTSL4-AS1Q5T5F5 129 aa6.96□□□□□ -1.29
PAX6-242ENST00000638878 KLK5Q9Y337 293 aaPredicted RBP6.96□□□□□ -1.29
PAX6-242ENST00000638878 LYRM9A8MSI8 78 aa6.95□□□□□ -1.3
PAX6-242ENST00000638878 USP17L23D6RBM5 183 aa6.95□□□□□ -1.3
PAX6-242ENST00000638878 RS1O15537 224 aa6.95□□□□□ -1.3
PAX6-242ENST00000638878 EPPK1P58107 5090 aaKnown RBP6.95□□□□□ -1.3
PAX6-242ENST00000638878 DNAH7Q8WXX0 4024 aa6.95□□□□□ -1.3
PAX6-242ENST00000638878 IGHV3OR16-12A0A075B7B8 117 aa6.95□□□□□ -1.3
PAX6-242ENST00000638878 TRAV8-3A0A0A6YYJ7 113 aa6.95□□□□□ -1.3
PAX6-242ENST00000638878 IGLV5-39A0A0G2JS06 123 aa6.95□□□□□ -1.3
PAX6-242ENST00000638878 COX7A2LO14548 114 aa6.95□□□□□ -1.3
PAX6-242ENST00000638878 DEFB4AO15263 64 aa6.95□□□□□ -1.3
PAX6-242ENST00000638878 TRACP01848 142 aa6.95□□□□□ -1.3
PAX6-242ENST00000638878 HERV-K104P63124 156 aa6.95□□□□□ -1.3
PAX6-242ENST00000638878 SERTAD4-AS1Q5TG53 156 aa6.95□□□□□ -1.3
PAX6-242ENST00000638878 DEFB104AQ8WTQ1 72 aa6.95□□□□□ -1.3
PAX6-242ENST00000638878 C16orf74Q96GX8 76 aa6.95□□□□□ -1.3
PAX6-242ENST00000638878 LINC01587Q99440 93 aa6.95□□□□□ -1.3
PAX6-242ENST00000638878 CSDC2Q9Y534 153 aaKnown RBP6.95□□□□□ -1.3
PAX6-242ENST00000638878 PLAC8L1A1L4L8 177 aa6.94□□□□□ -1.3
PAX6-242ENST00000638878 ATP5G1P05496 136 aa6.94□□□□□ -1.3
PAX6-242ENST00000638878 TMEM101Q96IK0 257 aa6.94□□□□□ -1.3
PAX6-242ENST00000638878 TENM2Q9NT68 2774 aa6.93□□□□□ -1.3
PAX6-242ENST00000638878 TRAV10A0A0B4J240 114 aa6.93□□□□□ -1.3
PAX6-242ENST00000638878 NANOS2P60321 138 aaKnown RBP6.93□□□□□ -1.3
PAX6-242ENST00000638878 DAZ2Q13117 558 aaKnown RBP6.93□□□□□ -1.3
PAX6-242ENST00000638878 LINC00308Q8TCZ7 52 aa6.93□□□□□ -1.3
PAX6-242ENST00000638878 TMEM126AQ9H061 195 aa6.93□□□□□ -1.3
PAX6-242ENST00000638878 RYR2Q92736 4967 aa6.92□□□□□ -1.3
PAX6-242ENST00000638878 TRBV10-1A0A0K0K1A3 114 aa6.92□□□□□ -1.3
PAX6-242ENST00000638878 FAM222AQ5U5X8 452 aa6.92□□□□□ -1.3
PAX6-242ENST00000638878 LINC00643Q86TS7 51 aa6.92□□□□□ -1.3
PAX6-242ENST00000638878 DYNC2H1Q8NCM8 4307 aaKnown RBP6.91□□□□□ -1.3
PAX6-242ENST00000638878 Q6ZTC4 211 aa6.91□□□□□ -1.3
PAX6-242ENST00000638878 LINC00612Q8N6U2 182 aa6.91□□□□□ -1.3
PAX6-242ENST00000638878 CLEC2BQ92478 149 aa6.91□□□□□ -1.3
PAX6-242ENST00000638878 CDKN2A-AS1Q9UH64 79 aa6.91□□□□□ -1.3
PAX6-242ENST00000638878 SS18L2Q9UHA2 77 aa6.91□□□□□ -1.3
PAX6-242ENST00000638878 CELA1Q9UNI1 258 aa6.91□□□□□ -1.3
PAX6-242ENST00000638878 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.9□□□□□ -1.31
PAX6-242ENST00000638878 IGHV3-73A0A0B4J1V6 119 aa6.9□□□□□ -1.31
PAX6-242ENST00000638878 LCE6AA0A183 80 aa6.9□□□□□ -1.31
PAX6-242ENST00000638878 IGKV2-29A2NJV5 120 aaPredicted RBP6.9□□□□□ -1.31
PAX6-242ENST00000638878 INAFM2P0DMQ5 153 aa6.9□□□□□ -1.31
PAX6-242ENST00000638878 CXCL5P42830 114 aa6.9□□□□□ -1.31
PAX6-242ENST00000638878 DAND5Q8N907 189 aa6.9□□□□□ -1.31
PAX6-242ENST00000638878 C11orf72Q8NBR9 251 aa6.9□□□□□ -1.31
PAX6-242ENST00000638878 DEFB131BA0A096LNP1 70 aa6.89□□□□□ -1.31
PAX6-242ENST00000638878 TRAV13-2A0A0B4J235 113 aa6.89□□□□□ -1.31
PAX6-242ENST00000638878 CCDC179H3BU77 68 aa6.89□□□□□ -1.31
PAX6-242ENST00000638878 PRM2P04554 102 aa6.89□□□□□ -1.31
PAX6-242ENST00000638878 HTN1P15515 57 aa6.89□□□□□ -1.31
PAX6-242ENST00000638878 DAD1P61803 113 aa6.89□□□□□ -1.31
PAX6-242ENST00000638878 SDIM1Q6ZPB5 146 aa6.89□□□□□ -1.31
PAX6-242ENST00000638878 Q6ZSN1 163 aa6.89□□□□□ -1.31
PAX6-242ENST00000638878 DAZ4Q86SG3 579 aaKnown RBP6.89□□□□□ -1.31
PAX6-242ENST00000638878 KRTAP17-1Q9BYP8 105 aa6.89□□□□□ -1.31
PAX6-242ENST00000638878 DAZ3Q9NR90 486 aaKnown RBP6.89□□□□□ -1.31
PAX6-242ENST00000638878 SACSQ9NZJ4 4579 aa6.89□□□□□ -1.31
PAX6-242ENST00000638878 RPL36AP83881 106 aaKnown RBP6.88□□□□□ -1.31
PAX6-242ENST00000638878 LINC00242Q5T6M2 205 aa6.88□□□□□ -1.31
PAX6-242ENST00000638878 RPL36ALQ969Q0 106 aaKnown RBP6.88□□□□□ -1.31
PAX6-242ENST00000638878 Q9H8V8 135 aa6.88□□□□□ -1.31
PAX6-242ENST00000638878 APLNQ9ULZ1 77 aa6.88□□□□□ -1.31
PAX6-242ENST00000638878 RNASE13Q5GAN3 156 aaKnown RBP6.87□□□□□ -1.31
PAX6-242ENST00000638878 MEIG1Q5JSS6 88 aa6.87□□□□□ -1.31
PAX6-242ENST00000638878 ZNF625Q96I27 306 aaPredicted RBP6.87□□□□□ -1.31
PAX6-242ENST00000638878 NOP10Q9NPE3 64 aaKnown RBP6.87□□□□□ -1.31
PAX6-242ENST00000638878 SMIM1B2RUZ4 78 aa6.86□□□□□ -1.31
PAX6-242ENST00000638878 F8WDY8 70 aa6.86□□□□□ -1.31
PAX6-242ENST00000638878 H3BNG1 76 aa6.86□□□□□ -1.31
PAX6-242ENST00000638878 BAALC-AS2P0C853 105 aa6.86□□□□□ -1.31
PAX6-242ENST00000638878 RPL28P46779 137 aaKnown RBP6.86□□□□□ -1.31
PAX6-242ENST00000638878 NPC2P61916 151 aa6.86□□□□□ -1.31
PAX6-242ENST00000638878 H0YGX0 51 aa6.85□□□□□ -1.31
PAX6-242ENST00000638878 DEFB130BP0DP73 79 aa6.85□□□□□ -1.31
PAX6-242ENST00000638878 DEFB130AP0DP74 79 aa6.85□□□□□ -1.31
PAX6-242ENST00000638878 COX6A2Q02221 97 aa6.85□□□□□ -1.31
PAX6-242ENST00000638878 LINC00476Q8WZB0 136 aa6.85□□□□□ -1.31
PAX6-242ENST00000638878 CDC42SE2Q9NRR3 84 aa6.85□□□□□ -1.31
PAX6-242ENST00000638878 STARD9Q9P2P6 4700 aa6.84□□□□□ -1.31
PAX6-242ENST00000638878 K7EQD1 137 aa6.84□□□□□ -1.31
PAX6-242ENST00000638878 C5orf38Q86SI9 138 aa6.84□□□□□ -1.31
PAX6-242ENST00000638878 IGHV3-38A0A0C4DH36 116 aa6.83□□□□□ -1.32
PAX6-242ENST00000638878 F5H768 121 aa6.83□□□□□ -1.32
PAX6-242ENST00000638878 LYSTQ99698 3801 aa6.83□□□□□ -1.32
PAX6-242ENST00000638878 DNAH1Q9P2D7 4330 aa6.83□□□□□ -1.32
PAX6-242ENST00000638878 UQCRQO14949 82 aa6.82□□□□□ -1.32
PAX6-242ENST00000638878 CRPP02741 224 aa6.82□□□□□ -1.32
PAX6-242ENST00000638878 SOSTDC1Q6X4U4 206 aa6.82□□□□□ -1.32
PAX6-242ENST00000638878 Q6ZTI0 123 aa6.82□□□□□ -1.32
PAX6-242ENST00000638878 C3orf22Q8N5N4 141 aa6.82□□□□□ -1.32
PAX6-242ENST00000638878 TMEM243Q9BU79 118 aa6.82□□□□□ -1.32
PAX6-242ENST00000638878 Q9UF83 564 aa6.82□□□□□ -1.32
PAX6-242ENST00000638878 CHCHD5Q9BSY4 110 aa6.82□□□□□ -1.32
PAX6-242ENST00000638878 TRGV2A0A075B6R0 118 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms