RNA–Protein interactions for RNA: ENST00000638400.1

GFAP-227, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,106 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-227ENST00000638400 TSPAN13O95857 204 aa8.46□□□□□ -1.06
GFAP-227ENST00000638400 SCGB1A1P11684 91 aa8.46□□□□□ -1.06
GFAP-227ENST00000638400 KRTAP10-2P60368 255 aa8.46□□□□□ -1.06
GFAP-227ENST00000638400 H3BMG7 143 aa8.45□□□□□ -1.06
GFAP-227ENST00000638400 CHCHD7Q9BUK0 85 aa8.45□□□□□ -1.06
GFAP-227ENST00000638400 SPANXDQ9BXN6 97 aa8.45□□□□□ -1.06
GFAP-227ENST00000638400 SPANXCQ9NY87 97 aa8.45□□□□□ -1.06
GFAP-227ENST00000638400 Q9UF83 564 aa8.45□□□□□ -1.06
GFAP-227ENST00000638400 PRO1854Q9UHT4 67 aa8.45□□□□□ -1.06
GFAP-227ENST00000638400 IGLV5-45A0A087WSX0 123 aa8.44□□□□□ -1.06
GFAP-227ENST00000638400 IGHV1-58A0A0C4DH39 117 aa8.44□□□□□ -1.06
GFAP-227ENST00000638400 CDK2AP2O75956 126 aa8.44□□□□□ -1.06
GFAP-227ENST00000638400 IGHV3-33P01772 117 aa8.44□□□□□ -1.06
GFAP-227ENST00000638400 CFC1BP0CG36 223 aa8.44□□□□□ -1.06
GFAP-227ENST00000638400 CFC1P0CG37 223 aa8.44□□□□□ -1.06
GFAP-227ENST00000638400 IGHV3-30-3P0DP02 117 aa8.44□□□□□ -1.06
GFAP-227ENST00000638400 FAM19A3Q7Z5A8 133 aa8.44□□□□□ -1.06
GFAP-227ENST00000638400 LINC00528Q8N1L1 170 aa8.44□□□□□ -1.06
GFAP-227ENST00000638400 UBE2D4Q9Y2X8 147 aa8.44□□□□□ -1.06
GFAP-227ENST00000638400 DNAH5Q8TE73 4624 aa8.43□□□□□ -1.06
GFAP-227ENST00000638400 A0A087WTM6 91 aa8.43□□□□□ -1.06
GFAP-227ENST00000638400 A0A0J9YXV3 536 aa8.43□□□□□ -1.06
GFAP-227ENST00000638400 A0A0J9YXY3 114 aa8.43□□□□□ -1.06
GFAP-227ENST00000638400 IBA57-AS1B1ANH7 110 aa8.43□□□□□ -1.06
GFAP-227ENST00000638400 WFDC2Q14508 124 aa8.43□□□□□ -1.06
GFAP-227ENST00000638400 LINC01600Q96MT4 127 aa8.43□□□□□ -1.06
GFAP-227ENST00000638400 CSDC2Q9Y534 153 aaKnown RBP8.43□□□□□ -1.06
GFAP-227ENST00000638400 PSCAO43653 123 aa8.42□□□□□ -1.06
GFAP-227ENST00000638400 IFITM1P13164 125 aa8.42□□□□□ -1.06
GFAP-227ENST00000638400 RPL36AP83881 106 aaKnown RBP8.42□□□□□ -1.06
GFAP-227ENST00000638400 RPL36ALQ969Q0 106 aaKnown RBP8.42□□□□□ -1.06
GFAP-227ENST00000638400 FAM104AQ969W3 186 aa8.42□□□□□ -1.06
GFAP-227ENST00000638400 PPDPFQ9H3Y8 114 aa8.42□□□□□ -1.06
GFAP-227ENST00000638400 Q9HAA7 133 aa8.42□□□□□ -1.06
GFAP-227ENST00000638400 HSPG2P98160 4391 aa8.42□□□□□ -1.06
GFAP-227ENST00000638400 APOMO95445 188 aa8.41□□□□□ -1.06
GFAP-227ENST00000638400 APOBP04114 4563 aaKnown RBP8.4□□□□□ -1.06
GFAP-227ENST00000638400 DAZ4Q86SG3 579 aaKnown RBP8.4□□□□□ -1.06
GFAP-227ENST00000638400 Q8N3U1 123 aa8.4□□□□□ -1.06
GFAP-227ENST00000638400 COPS9Q8WXC6 57 aa8.4□□□□□ -1.06
GFAP-227ENST00000638400 OPRPNQ99935 248 aaPredicted RBP8.4□□□□□ -1.06
GFAP-227ENST00000638400 DAZ3Q9NR90 486 aaKnown RBP8.4□□□□□ -1.06
GFAP-227ENST00000638400 ABCA13Q86UQ4 5058 aa8.39□□□□□ -1.07
GFAP-227ENST00000638400 A4D1N5 150 aa8.39□□□□□ -1.07
GFAP-227ENST00000638400 LCE2CQ5TA81 110 aa8.39□□□□□ -1.07
GFAP-227ENST00000638400 ERG28Q9UKR5 140 aa8.39□□□□□ -1.07
GFAP-227ENST00000638400 LOC107984156A0A0G2JMH3 177 aa8.38□□□□□ -1.07
GFAP-227ENST00000638400 H7C423 109 aa8.38□□□□□ -1.07
GFAP-227ENST00000638400 NDUFA1O15239 70 aa8.38□□□□□ -1.07
GFAP-227ENST00000638400 HERVK_113P63121 156 aa8.38□□□□□ -1.07
GFAP-227ENST00000638400 MIAQ16674 131 aa8.38□□□□□ -1.07
GFAP-227ENST00000638400 ETDBQ3ZM63 59 aa8.38□□□□□ -1.07
GFAP-227ENST00000638400 LCE2AQ5TA79 106 aaPredicted RBP8.38□□□□□ -1.07
GFAP-227ENST00000638400 TEN1Q86WV5 123 aa8.38□□□□□ -1.07
GFAP-227ENST00000638400 ARL17AQ8IVW1 177 aa8.38□□□□□ -1.07
GFAP-227ENST00000638400 PPDPFLQ8WWR9 84 aa8.38□□□□□ -1.07
GFAP-227ENST00000638400 LITAFQ99732 161 aa8.38□□□□□ -1.07
GFAP-227ENST00000638400 GEMIN7Q9H840 131 aaKnown RBP8.38□□□□□ -1.07
GFAP-227ENST00000638400 NDUFA12Q9UI09 145 aa8.38□□□□□ -1.07
GFAP-227ENST00000638400 TRAV8-3A0A0A6YYJ7 113 aa8.37□□□□□ -1.07
GFAP-227ENST00000638400 TRBV30A0A0K0K1B3 111 aa8.37□□□□□ -1.07
GFAP-227ENST00000638400 LRCOL1A6NCL2 159 aa8.37□□□□□ -1.07
GFAP-227ENST00000638400 FUSP35637 526 aaKnown RBP eCLIP8.37□□□□□ -1.07
GFAP-227ENST00000638400 PSMB2P49721 201 aa8.37□□□□□ -1.07
GFAP-227ENST00000638400 C21orf62-AS1Q17RA5 79 aa8.37□□□□□ -1.07
GFAP-227ENST00000638400 Q6ZUT4 128 aa8.37□□□□□ -1.07
GFAP-227ENST00000638400 MUSTN1Q8IVN3 82 aa8.37□□□□□ -1.07
GFAP-227ENST00000638400 SIGMAR1Q99720 223 aa8.37□□□□□ -1.07
GFAP-227ENST00000638400 IGLV5-39A0A0G2JS06 123 aa8.36□□□□□ -1.07
GFAP-227ENST00000638400 GAGE12HA6NDE8 117 aa8.36□□□□□ -1.07
GFAP-227ENST00000638400 TCL1BO95988 128 aa8.36□□□□□ -1.07
GFAP-227ENST00000638400 FOXI1Q12951 378 aa8.36□□□□□ -1.07
GFAP-227ENST00000638400 TRBV6-8A0A0A6YYG3 113 aa8.35□□□□□ -1.07
GFAP-227ENST00000638400 ATXN8Q156A1 80 aa8.35□□□□□ -1.07
GFAP-227ENST00000638400 DGAT2L7PQ6IED9 249 aa8.35□□□□□ -1.07
GFAP-227ENST00000638400 NTN5Q8WTR8 489 aaPredicted RBP8.35□□□□□ -1.07
GFAP-227ENST00000638400 RMI2Q96E14 147 aa8.35□□□□□ -1.07
GFAP-227ENST00000638400 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.34□□□□□ -1.07
GFAP-227ENST00000638400 IGLV5-52A0A0A0MRZ9 124 aa8.34□□□□□ -1.07
GFAP-227ENST00000638400 IGKV2-29A2NJV5 120 aaPredicted RBP8.34□□□□□ -1.07
GFAP-227ENST00000638400 SCGB1C2P0DMR2 95 aa8.34□□□□□ -1.07
GFAP-227ENST00000638400 CIRBPQ14011 172 aaKnown RBP8.34□□□□□ -1.07
GFAP-227ENST00000638400 Q8N814 137 aa8.34□□□□□ -1.07
GFAP-227ENST00000638400 DEFB104AQ8WTQ1 72 aa8.34□□□□□ -1.07
GFAP-227ENST00000638400 HERV-K104P63124 156 aa8.33□□□□□ -1.08
GFAP-227ENST00000638400 KLK12Q9UKR0 248 aa8.33□□□□□ -1.08
GFAP-227ENST00000638400 TMEM262E9PQX1 116 aa8.32□□□□□ -1.08
GFAP-227ENST00000638400 EIF4EBP3O60516 100 aaPredicted RBP8.32□□□□□ -1.08
GFAP-227ENST00000638400 COX6CP09669 75 aa8.32□□□□□ -1.08
GFAP-227ENST00000638400 KRTAP10-1P60331 282 aa8.32□□□□□ -1.08
GFAP-227ENST00000638400 Q8N1X5 172 aa8.32□□□□□ -1.08
GFAP-227ENST00000638400 UBE2WQ96B02 151 aa8.32□□□□□ -1.08
GFAP-227ENST00000638400 CHCHD5Q9BSY4 110 aa8.32□□□□□ -1.08
GFAP-227ENST00000638400 IGHV3-64A0A075B6Q5 118 aa8.31□□□□□ -1.08
GFAP-227ENST00000638400 SPINK8P0C7L1 97 aa8.31□□□□□ -1.08
GFAP-227ENST00000638400 KRTAP4-5Q9BYR2 181 aa8.31□□□□□ -1.08
GFAP-227ENST00000638400 IGKV2D-24A0A075B6R9 120 aa8.3□□□□□ -1.08
GFAP-227ENST00000638400 H3BT86 120 aa8.3□□□□□ -1.08
GFAP-227ENST00000638400 SLC25A20O43772 301 aa8.3□□□□□ -1.08
GFAP-227ENST00000638400 CRPP02741 224 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms