RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 CDC42SE2Q9NRR3 84 aa8.46□□□□□ -1.06
CAPN3-221ENST00000638141 CSMD2Q7Z408 3487 aa8.46□□□□□ -1.06
CAPN3-221ENST00000638141 TRBV10-1A0A0K0K1A3 114 aa8.46□□□□□ -1.06
CAPN3-221ENST00000638141 K7EQD1 137 aa8.46□□□□□ -1.06
CAPN3-221ENST00000638141 MIFP14174 115 aa8.46□□□□□ -1.06
CAPN3-221ENST00000638141 C6orf226Q5I0X4 101 aa8.46□□□□□ -1.06
CAPN3-221ENST00000638141 LMO4P61968 165 aa8.45□□□□□ -1.06
CAPN3-221ENST00000638141 Q6ZQT0 140 aa8.45□□□□□ -1.06
CAPN3-221ENST00000638141 TRAV10A0A0B4J240 114 aa8.44□□□□□ -1.06
CAPN3-221ENST00000638141 PLAC8L1A1L4L8 177 aa8.44□□□□□ -1.06
CAPN3-221ENST00000638141 LINC00158P58513 81 aa8.44□□□□□ -1.06
CAPN3-221ENST00000638141 Q6ZRU5 148 aa8.44□□□□□ -1.06
CAPN3-221ENST00000638141 FBN2P35556 2912 aa8.44□□□□□ -1.06
CAPN3-221ENST00000638141 C4orf48Q5BLP8 95 aa8.43□□□□□ -1.06
CAPN3-221ENST00000638141 ABCA12Q86UK0 2595 aa8.42□□□□□ -1.06
CAPN3-221ENST00000638141 PDE6GP18545 87 aa8.42□□□□□ -1.06
CAPN3-221ENST00000638141 CSMD1Q96PZ7 3565 aa8.42□□□□□ -1.06
CAPN3-221ENST00000638141 AKAP6Q13023 2319 aa8.42□□□□□ -1.06
CAPN3-221ENST00000638141 PMAIP1Q13794 54 aa8.42□□□□□ -1.06
CAPN3-221ENST00000638141 PAX4O43316 350 aa8.41□□□□□ -1.06
CAPN3-221ENST00000638141 ESRGQ1W209 222 aa8.41□□□□□ -1.06
CAPN3-221ENST00000638141 Q6ZVQ6 151 aa8.41□□□□□ -1.06
CAPN3-221ENST00000638141 ITPR2Q14571 2701 aa8.41□□□□□ -1.06
CAPN3-221ENST00000638141 C6orf223Q8N319 242 aa8.41□□□□□ -1.06
CAPN3-221ENST00000638141 BPESC1Q9GZL8 116 aa8.41□□□□□ -1.06
CAPN3-221ENST00000638141 APCP25054 2843 aa8.41□□□□□ -1.06
CAPN3-221ENST00000638141 C9orf66Q5T8R8 295 aa8.4□□□□□ -1.06
CAPN3-221ENST00000638141 UNC79Q9P2D8 2635 aa8.4□□□□□ -1.06
CAPN3-221ENST00000638141 MAP1AP78559 2803 aaPredicted RBP8.4□□□□□ -1.06
CAPN3-221ENST00000638141 SVEP1Q4LDE5 3571 aa8.4□□□□□ -1.06
CAPN3-221ENST00000638141 TMEM254Q8TBM7 123 aa8.4□□□□□ -1.07
CAPN3-221ENST00000638141 SPG11Q96JI7 2443 aa8.39□□□□□ -1.07
CAPN3-221ENST00000638141 A0A096LNT2 108 aa8.39□□□□□ -1.07
CAPN3-221ENST00000638141 H3BQ85 93 aa8.39□□□□□ -1.07
CAPN3-221ENST00000638141 IGHV4-38-2P0DP08 117 aa8.39□□□□□ -1.07
CAPN3-221ENST00000638141 Q6ZTI0 123 aa8.39□□□□□ -1.07
CAPN3-221ENST00000638141 Q8N3U1 123 aa8.39□□□□□ -1.07
CAPN3-221ENST00000638141 VPS13CQ709C8 3753 aa8.39□□□□□ -1.07
CAPN3-221ENST00000638141 POLQO75417 2590 aa8.39□□□□□ -1.07
CAPN3-221ENST00000638141 FAM229BQ4G0N7 80 aa8.39□□□□□ -1.07
CAPN3-221ENST00000638141 DYNLRB2Q8TF09 96 aa8.39□□□□□ -1.07
CAPN3-221ENST00000638141 NANOS2P60321 138 aaKnown RBP8.38□□□□□ -1.07
CAPN3-221ENST00000638141 NREPQ16612 68 aa8.38□□□□□ -1.07
CAPN3-221ENST00000638141 NTM-AS1Q6ZSK4 140 aa8.38□□□□□ -1.07
CAPN3-221ENST00000638141 C11orf44Q8N8P7 122 aa8.38□□□□□ -1.07
CAPN3-221ENST00000638141 TM2D3Q9BRN9 247 aa8.38□□□□□ -1.07
CAPN3-221ENST00000638141 H3BUX3 64 aa8.36□□□□□ -1.07
CAPN3-221ENST00000638141 UBE2L6O14933 153 aa8.36□□□□□ -1.07
CAPN3-221ENST00000638141 INSP01308 110 aa8.36□□□□□ -1.07
CAPN3-221ENST00000638141 HTN1P15515 57 aa8.36□□□□□ -1.07
CAPN3-221ENST00000638141 HAMPP81172 84 aa8.36□□□□□ -1.07
CAPN3-221ENST00000638141 IL17DQ8TAD2 202 aa8.36□□□□□ -1.07
CAPN3-221ENST00000638141 IGHV3OR16-9A0A0B4J2B5 98 aa8.35□□□□□ -1.07
CAPN3-221ENST00000638141 A0A1W2PPR1 153 aa8.35□□□□□ -1.07
CAPN3-221ENST00000638141 LY6EQ16553 131 aa8.35□□□□□ -1.07
CAPN3-221ENST00000638141 MPLKIPQ8TAP9 179 aa8.35□□□□□ -1.07
CAPN3-221ENST00000638141 A0A087WZ39 114 aa8.35□□□□□ -1.07
CAPN3-221ENST00000638141 PRYO14603 147 aa8.35□□□□□ -1.07
CAPN3-221ENST00000638141 TOMM7Q9P0U1 55 aa8.35□□□□□ -1.07
CAPN3-221ENST00000638141 Q6ZTC4 211 aa8.34□□□□□ -1.07
CAPN3-221ENST00000638141 CD164Q04900 197 aa8.34□□□□□ -1.07
CAPN3-221ENST00000638141 NOTCH2Q04721 2471 aa8.34□□□□□ -1.08
CAPN3-221ENST00000638141 FUSP35637 526 aaKnown RBP eCLIP8.33□□□□□ -1.08
CAPN3-221ENST00000638141 DEFB131AP59861 70 aa8.33□□□□□ -1.08
CAPN3-221ENST00000638141 Q1T7F1 81 aa8.33□□□□□ -1.08
CAPN3-221ENST00000638141 C11orf68Q9H3H3 251 aaKnown RBP8.33□□□□□ -1.08
CAPN3-221ENST00000638141 LINC00575Q6W349 94 aa8.33□□□□□ -1.08
CAPN3-221ENST00000638141 BRD3OSQ6XYD6 125 aa8.33□□□□□ -1.08
CAPN3-221ENST00000638141 KRTAP10-9P60411 292 aa8.32□□□□□ -1.08
CAPN3-221ENST00000638141 ANKRD17O75179 2603 aaKnown RBP8.32□□□□□ -1.08
CAPN3-221ENST00000638141 BPY2O14599 106 aa8.31□□□□□ -1.08
CAPN3-221ENST00000638141 PDZD2O15018 2839 aa8.31□□□□□ -1.08
CAPN3-221ENST00000638141 CYSRT1A8MQ03 144 aa8.3□□□□□ -1.08
CAPN3-221ENST00000638141 M0R2N4 97 aa8.3□□□□□ -1.08
CAPN3-221ENST00000638141 OCR1Q9BZK8 76 aa8.3□□□□□ -1.08
CAPN3-221ENST00000638141 IGHV4-31P0DP07 118 aa8.29□□□□□ -1.08
CAPN3-221ENST00000638141 hDV103S1A0JD37 113 aa8.28□□□□□ -1.08
CAPN3-221ENST00000638141 CCDC168Q8NDH2 2452 aa8.28□□□□□ -1.08
CAPN3-221ENST00000638141 TEX15Q9BXT5 2789 aa8.28□□□□□ -1.08
CAPN3-221ENST00000638141 AKAP9Q99996 3911 aa8.28□□□□□ -1.08
CAPN3-221ENST00000638141 COX17Q14061 63 aa8.28□□□□□ -1.08
CAPN3-221ENST00000638141 Q8IZM0 81 aa8.28□□□□□ -1.08
CAPN3-221ENST00000638141 UBE2E2Q96LR5 201 aa8.28□□□□□ -1.08
CAPN3-221ENST00000638141 PRM2P04554 102 aa8.27□□□□□ -1.09
CAPN3-221ENST00000638141 MUC7Q8TAX7 377 aa8.27□□□□□ -1.09
CAPN3-221ENST00000638141 TRGV1A0A0A0MS02 117 aa8.27□□□□□ -1.09
CAPN3-221ENST00000638141 STHQ8IWL8 128 aa8.27□□□□□ -1.09
CAPN3-221ENST00000638141 MAP6D1Q9H9H5 199 aa8.27□□□□□ -1.09
CAPN3-221ENST00000638141 CELSR1Q9NYQ6 3014 aa8.26□□□□□ -1.09
CAPN3-221ENST00000638141 C6orf99Q4VX62 202 aa8.26□□□□□ -1.09
CAPN3-221ENST00000638141 ZNF469Q96JG9 3925 aaPredicted RBP8.25□□□□□ -1.09
CAPN3-221ENST00000638141 ZFHX3Q15911 3703 aa8.25□□□□□ -1.09
CAPN3-221ENST00000638141 RNASE1P07998 156 aaKnown RBP8.25□□□□□ -1.09
CAPN3-221ENST00000638141 SPATA3Q8NHX4 192 aa8.25□□□□□ -1.09
CAPN3-221ENST00000638141 LCE6AA0A183 80 aa8.23□□□□□ -1.09
CAPN3-221ENST00000638141 DAD1P61803 113 aa8.23□□□□□ -1.09
CAPN3-221ENST00000638141 CCL19Q99731 98 aa8.23□□□□□ -1.09
CAPN3-221ENST00000638141 MYO9AB2RTY4 2548 aa8.23□□□□□ -1.09
CAPN3-221ENST00000638141 DEFB114Q30KQ6 69 aa8.22□□□□□ -1.09
CAPN3-221ENST00000638141 Q6ZRP5 223 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms