RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 SRSF9Q13242 221 aaKnown RBP eCLIP11.13□□□□□ -0.63
CLCN2-220ENST00000637538 Q8IZM0 81 aa11.13□□□□□ -0.63
CLCN2-220ENST00000637538 EPPK1P58107 5090 aaKnown RBP11.13□□□□□ -0.63
CLCN2-220ENST00000637538 LCE6AA0A183 80 aa11.12□□□□□ -0.63
CLCN2-220ENST00000637538 MALP21145 153 aa11.12□□□□□ -0.63
CLCN2-220ENST00000637538 A0A0J9YXY3 114 aa11.11□□□□□ -0.63
CLCN2-220ENST00000637538 TOMM7Q9P0U1 55 aa11.11□□□□□ -0.63
CLCN2-220ENST00000637538 BIRC6Q9NR09 4857 aa11.11□□□□□ -0.63
CLCN2-220ENST00000637538 ALMS1Q8TCU4 4167 aa11.1□□□□□ -0.63
CLCN2-220ENST00000637538 NBDYA0A0U1RRE5 68 aa11.1□□□□□ -0.63
CLCN2-220ENST00000637538 A0A1B0GWB2 263 aa11.1□□□□□ -0.63
CLCN2-220ENST00000637538 APOMO95445 188 aa11.1□□□□□ -0.63
CLCN2-220ENST00000637538 RMI2Q96E14 147 aa11.1□□□□□ -0.63
CLCN2-220ENST00000637538 RYR2Q92736 4967 aa11.1□□□□□ -0.63
CLCN2-220ENST00000637538 TMEM238LA0A1B0GVL6 79 aa11.09□□□□□ -0.63
CLCN2-220ENST00000637538 A6NJY4 79 aa11.09□□□□□ -0.63
CLCN2-220ENST00000637538 VAMP3Q15836 100 aa11.09□□□□□ -0.63
CLCN2-220ENST00000637538 TTC32Q5I0X7 151 aa11.09□□□□□ -0.63
CLCN2-220ENST00000637538 C15orf56Q8N910 161 aa11.09□□□□□ -0.63
CLCN2-220ENST00000637538 NHP2Q9NX24 153 aaKnown RBP11.09□□□□□ -0.63
CLCN2-220ENST00000637538 DNAH6Q9C0G6 4158 aa11.09□□□□□ -0.63
CLCN2-220ENST00000637538 UBE2V1Q13404 147 aa11.09□□□□□ -0.63
CLCN2-220ENST00000637538 LITAFQ99732 161 aa11.09□□□□□ -0.63
CLCN2-220ENST00000637538 HERV-K104P63124 156 aa11.08□□□□□ -0.64
CLCN2-220ENST00000637538 C6orf226Q5I0X4 101 aa11.08□□□□□ -0.64
CLCN2-220ENST00000637538 TMEM238C9JI98 176 aa11.07□□□□□ -0.64
CLCN2-220ENST00000637538 PRSS2P07478 247 aa11.07□□□□□ -0.64
CLCN2-220ENST00000637538 SPAG11BQ08648 103 aa11.07□□□□□ -0.64
CLCN2-220ENST00000637538 SFTA2Q6UW10 78 aa11.07□□□□□ -0.64
CLCN2-220ENST00000637538 RAB37Q96AX2 223 aa11.07□□□□□ -0.64
CLCN2-220ENST00000637538 TIMM17BO60830 172 aa11.06□□□□□ -0.64
CLCN2-220ENST00000637538 DNAH10Q8IVF4 4471 aa11.05□□□□□ -0.64
CLCN2-220ENST00000637538 H3BUT2 72 aa11.05□□□□□ -0.64
CLCN2-220ENST00000637538 CXCL5P42830 114 aa11.05□□□□□ -0.64
CLCN2-220ENST00000637538 GVQW2A0A096LPI5 108 aaPredicted RBP11.04□□□□□ -0.64
CLCN2-220ENST00000637538 CFAP161Q6P656 301 aa11.04□□□□□ -0.64
CLCN2-220ENST00000637538 C2orf82Q6UX34 121 aa11.04□□□□□ -0.64
CLCN2-220ENST00000637538 Q6ZR54 194 aa11.04□□□□□ -0.64
CLCN2-220ENST00000637538 NTN5Q8WTR8 489 aaPredicted RBP11.04□□□□□ -0.64
CLCN2-220ENST00000637538 LINC00476Q8WZB0 136 aa11.04□□□□□ -0.64
CLCN2-220ENST00000637538 K7ERJ3 54 aa11.04□□□□□ -0.64
CLCN2-220ENST00000637538 ADAMTSL4-AS1Q5T5F5 129 aa11.04□□□□□ -0.64
CLCN2-220ENST00000637538 C6orf223Q8N319 242 aa11.04□□□□□ -0.64
CLCN2-220ENST00000637538 A0A1W2PPM0 123 aa11.03□□□□□ -0.64
CLCN2-220ENST00000637538 LINC00526Q96FQ7 95 aa11.03□□□□□ -0.64
CLCN2-220ENST00000637538 KMT2AQ03164 3969 aa11.03□□□□□ -0.64
CLCN2-220ENST00000637538 SACSQ9NZJ4 4579 aa11.03□□□□□ -0.64
CLCN2-220ENST00000637538 CKS1BP61024 79 aa11.02□□□□□ -0.65
CLCN2-220ENST00000637538 HIGD2BQ4VC39 106 aa11.02□□□□□ -0.65
CLCN2-220ENST00000637538 Q6ZRN7 208 aaPredicted RBP11.02□□□□□ -0.65
CLCN2-220ENST00000637538 SPANXDQ9BXN6 97 aa11.02□□□□□ -0.65
CLCN2-220ENST00000637538 SPANXCQ9NY87 97 aa11.02□□□□□ -0.65
CLCN2-220ENST00000637538 USP17L23D6RBM5 183 aa11.01□□□□□ -0.65
CLCN2-220ENST00000637538 RPL24P83731 157 aaKnown RBP11.01□□□□□ -0.65
CLCN2-220ENST00000637538 C10orf25Q5T742 122 aa11.01□□□□□ -0.65
CLCN2-220ENST00000637538 GTF2H5Q6ZYL4 71 aa11.01□□□□□ -0.65
CLCN2-220ENST00000637538 GAGE10A6NGK3 116 aa11□□□□□ -0.65
CLCN2-220ENST00000637538 FABP2P12104 132 aa11□□□□□ -0.65
CLCN2-220ENST00000637538 UNQ6190/PRO20217Q6UXQ8 127 aa11□□□□□ -0.65
CLCN2-220ENST00000637538 C2orf48Q96LS8 159 aa11□□□□□ -0.65
CLCN2-220ENST00000637538 LY6G6CO95867 125 aa10.99□□□□□ -0.65
CLCN2-220ENST00000637538 CIRBPQ14011 172 aaKnown RBP10.99□□□□□ -0.65
CLCN2-220ENST00000637538 MUSTN1Q8IVN3 82 aa10.99□□□□□ -0.65
CLCN2-220ENST00000637538 F8WDY8 70 aa10.99□□□□□ -0.65
CLCN2-220ENST00000637538 ZNF561-AS1K7EIQ3 104 aa10.99□□□□□ -0.65
CLCN2-220ENST00000637538 MEIG1Q5JSS6 88 aa10.99□□□□□ -0.65
CLCN2-220ENST00000637538 ERG28Q9UKR5 140 aa10.99□□□□□ -0.65
CLCN2-220ENST00000637538 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.98□□□□□ -0.65
CLCN2-220ENST00000637538 K7EP34 96 aa10.98□□□□□ -0.65
CLCN2-220ENST00000637538 M0R2N4 97 aa10.98□□□□□ -0.65
CLCN2-220ENST00000637538 IFITM1P13164 125 aa10.98□□□□□ -0.65
CLCN2-220ENST00000637538 WFDC2Q14508 124 aa10.98□□□□□ -0.65
CLCN2-220ENST00000637538 NAA38Q9BRA0 125 aaKnown RBP10.98□□□□□ -0.65
CLCN2-220ENST00000637538 DNAH2Q9P225 4427 aa10.97□□□□□ -0.65
CLCN2-220ENST00000637538 CFC1BP0CG36 223 aa10.97□□□□□ -0.65
CLCN2-220ENST00000637538 CFC1P0CG37 223 aa10.97□□□□□ -0.65
CLCN2-220ENST00000637538 A4D1N5 150 aa10.96□□□□□ -0.65
CLCN2-220ENST00000637538 DAND5Q8N907 189 aa10.96□□□□□ -0.65
CLCN2-220ENST00000637538 C6orf48Q9UBA6 75 aa10.96□□□□□ -0.65
CLCN2-220ENST00000637538 A0A0B4J2C4 111 aa10.95□□□□□ -0.66
CLCN2-220ENST00000637538 TRBV30A0A0K0K1B3 111 aa10.95□□□□□ -0.66
CLCN2-220ENST00000637538 A0A0U1RRA0 63 aa10.95□□□□□ -0.66
CLCN2-220ENST00000637538 EIF4EBP3O60516 100 aaPredicted RBP10.95□□□□□ -0.66
CLCN2-220ENST00000637538 COX17Q14061 63 aa10.95□□□□□ -0.66
CLCN2-220ENST00000637538 CAMK2N2Q96S95 79 aa10.95□□□□□ -0.66
CLCN2-220ENST00000637538 PPDPFQ9H3Y8 114 aa10.95□□□□□ -0.66
CLCN2-220ENST00000637538 SPCS1Q9Y6A9 102 aa10.95□□□□□ -0.66
CLCN2-220ENST00000637538 LRCOL1A6NCL2 159 aa10.94□□□□□ -0.66
CLCN2-220ENST00000637538 LECT2O14960 151 aa10.94□□□□□ -0.66
CLCN2-220ENST00000637538 PSCAO43653 123 aa10.94□□□□□ -0.66
CLCN2-220ENST00000637538 SLPIP03973 132 aa10.94□□□□□ -0.66
CLCN2-220ENST00000637538 C9orf116Q5BN46 136 aaPredicted RBP10.94□□□□□ -0.66
CLCN2-220ENST00000637538 Q6ZRU5 148 aa10.94□□□□□ -0.66
CLCN2-220ENST00000637538 PGPEP1Q9NXJ5 209 aa10.94□□□□□ -0.66
CLCN2-220ENST00000637538 PRO1854Q9UHT4 67 aa10.94□□□□□ -0.66
CLCN2-220ENST00000637538 PFN2P35080 140 aa10.94□□□□□ -0.66
CLCN2-220ENST00000637538 LINC00158P58513 81 aa10.94□□□□□ -0.66
CLCN2-220ENST00000637538 SOSTDC1Q6X4U4 206 aa10.94□□□□□ -0.66
CLCN2-220ENST00000637538 MIR7-3HGQ8N6C7 128 aa10.94□□□□□ -0.66
CLCN2-220ENST00000637538 LINC00308Q8TCZ7 52 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms