RNA–Protein interactions for RNA: ENST00000636769.1

SCN2A-213, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-213ENST00000636769 A0A1B0GU69 56 aa4.34□□□□□ -1.71
SCN2A-213ENST00000636769 C6orf223Q8N319 242 aa4.34□□□□□ -1.71
SCN2A-213ENST00000636769 RETNLBQ9BQ08 111 aa4.34□□□□□ -1.72
SCN2A-213ENST00000636769 ZFHX2Q9C0A1 2572 aaPredicted RBP4.34□□□□□ -1.72
SCN2A-213ENST00000636769 TMEM131Q92545 1883 aa4.33□□□□□ -1.72
SCN2A-213ENST00000636769 ATG2AQ2TAZ0 1938 aa4.33□□□□□ -1.72
SCN2A-213ENST00000636769 NOTCH4Q99466 2003 aa4.33□□□□□ -1.72
SCN2A-213ENST00000636769 ACYP2P14621 99 aa4.33□□□□□ -1.72
SCN2A-213ENST00000636769 ZNF702PQ9H963 129 aa4.33□□□□□ -1.72
SCN2A-213ENST00000636769 HIVEP3Q5T1R4 2406 aa4.33□□□□□ -1.72
SCN2A-213ENST00000636769 KIF26AQ9ULI4 1882 aaPredicted RBP4.33□□□□□ -1.72
SCN2A-213ENST00000636769 IGLV4-60A0A075B6I1 120 aa4.33□□□□□ -1.72
SCN2A-213ENST00000636769 PRR3P79522 188 aaKnown RBP4.33□□□□□ -1.72
SCN2A-213ENST00000636769 Q8N2B8 174 aa4.33□□□□□ -1.72
SCN2A-213ENST00000636769 IGHV4-30-4P0DP06 118 aa4.32□□□□□ -1.72
SCN2A-213ENST00000636769 IGHV4-31P0DP07 118 aa4.32□□□□□ -1.72
SCN2A-213ENST00000636769 ATP11AUNQ6ZP68 121 aa4.32□□□□□ -1.72
SCN2A-213ENST00000636769 Q6ZTC4 211 aa4.32□□□□□ -1.72
SCN2A-213ENST00000636769 Q8NA96 180 aa4.32□□□□□ -1.72
SCN2A-213ENST00000636769 Q9BRP9 147 aa4.32□□□□□ -1.72
SCN2A-213ENST00000636769 ELOF1P60002 83 aaKnown RBP4.32□□□□□ -1.72
SCN2A-213ENST00000636769 IGHV6-1A0A0B4J1U7 121 aa4.32□□□□□ -1.72
SCN2A-213ENST00000636769 LINC00315P59091 139 aa4.32□□□□□ -1.72
SCN2A-213ENST00000636769 C9orf116Q5BN46 136 aaPredicted RBP4.32□□□□□ -1.72
SCN2A-213ENST00000636769 IGHV3OR16-9A0A0B4J2B5 98 aa4.31□□□□□ -1.72
SCN2A-213ENST00000636769 J3QKU1 62 aa4.31□□□□□ -1.72
SCN2A-213ENST00000636769 HCFC1P51610 2035 aa4.31□□□□□ -1.72
SCN2A-213ENST00000636769 C2orf16Q68DN1 1984 aa4.31□□□□□ -1.72
SCN2A-213ENST00000636769 ODF3L2Q3SX64 289 aa4.31□□□□□ -1.72
SCN2A-213ENST00000636769 PCDH15Q96QU1 1955 aa4.31□□□□□ -1.72
SCN2A-213ENST00000636769 FAM218AQ96MZ4 157 aa4.31□□□□□ -1.72
SCN2A-213ENST00000636769 LINC00336Q6ZUF6 198 aa4.31□□□□□ -1.72
SCN2A-213ENST00000636769 IGLV9-49A0A0B4J1Y8 123 aa4.3□□□□□ -1.72
SCN2A-213ENST00000636769 KTN1-AS1Q86SY8 53 aa4.3□□□□□ -1.72
SCN2A-213ENST00000636769 LINC01006Q8NI28 216 aa4.3□□□□□ -1.72
SCN2A-213ENST00000636769 TM2D3Q9BRN9 247 aa4.3□□□□□ -1.72
SCN2A-213ENST00000636769 BDP1A6H8Y1 2624 aa4.3□□□□□ -1.72
SCN2A-213ENST00000636769 EML5Q05BV3 1969 aa4.3□□□□□ -1.72
SCN2A-213ENST00000636769 KIAA1549Q9HCM3 1950 aa4.3□□□□□ -1.72
SCN2A-213ENST00000636769 Q8NBF4 154 aa4.29□□□□□ -1.72
SCN2A-213ENST00000636769 C7orf65Q6ZTY9 151 aa4.29□□□□□ -1.72
SCN2A-213ENST00000636769 ACACBO00763 2458 aa4.29□□□□□ -1.72
SCN2A-213ENST00000636769 SORL1Q92673 2214 aa4.29□□□□□ -1.72
SCN2A-213ENST00000636769 KIAA1549LQ6ZVL6 1849 aa4.29□□□□□ -1.72
SCN2A-213ENST00000636769 TRAV22A0A0B4J277 110 aa4.29□□□□□ -1.72
SCN2A-213ENST00000636769 CACNA1AO00555 2505 aa4.29□□□□□ -1.72
SCN2A-213ENST00000636769 ARHGAP32A7KAX9 2087 aa4.29□□□□□ -1.72
SCN2A-213ENST00000636769 LCA10Q71F78 164 aa4.29□□□□□ -1.72
SCN2A-213ENST00000636769 SMCR5Q8TEV8 140 aa4.29□□□□□ -1.72
SCN2A-213ENST00000636769 C10orf99Q6UWK7 81 aa4.28□□□□□ -1.72
SCN2A-213ENST00000636769 FHL3Q13643 280 aa4.28□□□□□ -1.72
SCN2A-213ENST00000636769 LITAFQ99732 161 aa4.28□□□□□ -1.72
SCN2A-213ENST00000636769 AGRNO00468 2067 aa4.28□□□□□ -1.72
SCN2A-213ENST00000636769 Q6ZSN1 163 aa4.28□□□□□ -1.72
SCN2A-213ENST00000636769 NUP210LQ5VU65 1888 aa4.27□□□□□ -1.73
SCN2A-213ENST00000636769 LOC101927531A0A1B0GV80 90 aa4.27□□□□□ -1.73
SCN2A-213ENST00000636769 C6orf48Q9UBA6 75 aa4.27□□□□□ -1.73
SCN2A-213ENST00000636769 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.27□□□□□ -1.73
SCN2A-213ENST00000636769 KIAA0087Q14695 138 aa4.27□□□□□ -1.73
SCN2A-213ENST00000636769 FAM208BQ5VWN6 2430 aa4.27□□□□□ -1.73
SCN2A-213ENST00000636769 A8MUN3 132 aa4.27□□□□□ -1.73
SCN2A-213ENST00000636769 H7BZZ5 65 aa4.27□□□□□ -1.73
SCN2A-213ENST00000636769 IGLV1-51P01701 117 aa4.26□□□□□ -1.73
SCN2A-213ENST00000636769 PRR15Q8IV56 129 aa4.26□□□□□ -1.73
SCN2A-213ENST00000636769 LINC01600Q96MT4 127 aa4.26□□□□□ -1.73
SCN2A-213ENST00000636769 LTBP2Q14767 1821 aa4.26□□□□□ -1.73
SCN2A-213ENST00000636769 HIVEP2P31629 2446 aa4.26□□□□□ -1.73
SCN2A-213ENST00000636769 MUC6Q6W4X9 2439 aa4.26□□□□□ -1.73
SCN2A-213ENST00000636769 TECTAO75443 2155 aa4.26□□□□□ -1.73
SCN2A-213ENST00000636769 SPG11Q96JI7 2443 aa4.26□□□□□ -1.73
SCN2A-213ENST00000636769 MYO18BQ8IUG5 2567 aa4.26□□□□□ -1.73
SCN2A-213ENST00000636769 LY6G6DO95868 133 aa4.25□□□□□ -1.73
SCN2A-213ENST00000636769 PRRC2AP48634 2157 aaKnown RBP4.25□□□□□ -1.73
SCN2A-213ENST00000636769 A8MTW9 85 aa4.25□□□□□ -1.73
SCN2A-213ENST00000636769 Q9UF83 564 aa4.25□□□□□ -1.73
SCN2A-213ENST00000636769 TRBV7-4A0A0J9YYF1 115 aa4.25□□□□□ -1.73
SCN2A-213ENST00000636769 MOBPQ13875 183 aa4.25□□□□□ -1.73
SCN2A-213ENST00000636769 UQCR11O14957 56 aa4.24□□□□□ -1.73
SCN2A-213ENST00000636769 Q6ZRU5 148 aa4.23□□□□□ -1.73
SCN2A-213ENST00000636769 SPINK1P00995 79 aa4.23□□□□□ -1.73
SCN2A-213ENST00000636769 COA5Q86WW8 74 aa4.23□□□□□ -1.73
SCN2A-213ENST00000636769 DEFB116Q30KQ4 102 aa4.23□□□□□ -1.73
SCN2A-213ENST00000636769 NOTCH2Q04721 2471 aa4.23□□□□□ -1.73
SCN2A-213ENST00000636769 OTOGLQ3ZCN5 2332 aa4.23□□□□□ -1.73
SCN2A-213ENST00000636769 GVQW2A0A096LPI5 108 aaPredicted RBP4.22□□□□□ -1.73
SCN2A-213ENST00000636769 Q6ZRX8 168 aa4.22□□□□□ -1.73
SCN2A-213ENST00000636769 C22orf24Q9Y442 160 aa4.22□□□□□ -1.73
SCN2A-213ENST00000636769 SRCAPQ6ZRS2 3230 aa4.22□□□□□ -1.73
SCN2A-213ENST00000636769 LYPD5Q6UWN5 251 aa4.22□□□□□ -1.73
SCN2A-213ENST00000636769 KLK9Q2XQG4 91 aa4.22□□□□□ -1.73
SCN2A-213ENST00000636769 CSPG4Q6UVK1 2322 aa4.21□□□□□ -1.73
SCN2A-213ENST00000636769 C19orf84I3L1E1 186 aa4.21□□□□□ -1.73
SCN2A-213ENST00000636769 C18orf65Q6ZTR6 163 aa4.21□□□□□ -1.73
SCN2A-213ENST00000636769 MUC22E2RYF6 1773 aaPredicted RBP4.21□□□□□ -1.73
SCN2A-213ENST00000636769 EDN2P20800 178 aa4.21□□□□□ -1.74
SCN2A-213ENST00000636769 SPANXA2-OT1Q8N9U9 137 aa4.21□□□□□ -1.74
SCN2A-213ENST00000636769 CIRBP-AS1Q8TBR5 109 aa4.21□□□□□ -1.74
SCN2A-213ENST00000636769 IGLV6-57P01721 117 aa4.21□□□□□ -1.74
SCN2A-213ENST00000636769 FSHBP01225 129 aa4.2□□□□□ -1.74
SCN2A-213ENST00000636769 SPINT4Q6UDR6 99 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms