RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 PCP2Q8IVA1 136 aa4.88□□□□□ -1.63
CIITA-214ENST00000636238 LINC00469Q8N7U9 141 aa4.88□□□□□ -1.63
CIITA-214ENST00000636238 FAM30AQ9NZY2 134 aa4.88□□□□□ -1.63
CIITA-214ENST00000636238 CDKN2A-AS1Q9UH64 79 aa4.88□□□□□ -1.63
CIITA-214ENST00000636238 KLK12Q9UKR0 248 aa4.88□□□□□ -1.63
CIITA-214ENST00000636238 IGLV10-54A0A075B6I4 117 aa4.87□□□□□ -1.63
CIITA-214ENST00000636238 TRAV8-3A0A0A6YYJ7 113 aa4.87□□□□□ -1.63
CIITA-214ENST00000636238 COX8AP10176 69 aa4.87□□□□□ -1.63
CIITA-214ENST00000636238 HERVK_113P61574 105 aa4.87□□□□□ -1.63
CIITA-214ENST00000636238 HAMPP81172 84 aa4.87□□□□□ -1.63
CIITA-214ENST00000636238 FAM19A3Q7Z5A8 133 aa4.87□□□□□ -1.63
CIITA-214ENST00000636238 MIEN1Q9BRT3 115 aa4.87□□□□□ -1.63
CIITA-214ENST00000636238 UQCR10Q9UDW1 63 aa4.87□□□□□ -1.63
CIITA-214ENST00000636238 COX11Q9Y6N1 276 aa4.87□□□□□ -1.63
CIITA-214ENST00000636238 LINC00587B1AMM8 73 aa4.86□□□□□ -1.63
CIITA-214ENST00000636238 E9PLD3 99 aa4.86□□□□□ -1.63
CIITA-214ENST00000636238 CCL25O15444 150 aa4.86□□□□□ -1.63
CIITA-214ENST00000636238 DDTP30046 118 aa4.86□□□□□ -1.63
CIITA-214ENST00000636238 XCL1P47992 114 aa4.86□□□□□ -1.63
CIITA-214ENST00000636238 TSPEAR-AS2P59090 65 aa4.86□□□□□ -1.63
CIITA-214ENST00000636238 KRTAP10-4P60372 401 aaPredicted RBP4.86□□□□□ -1.63
CIITA-214ENST00000636238 HERVK_113P63121 156 aa4.86□□□□□ -1.63
CIITA-214ENST00000636238 REG3AQ06141 175 aa4.86□□□□□ -1.63
CIITA-214ENST00000636238 SS18Q15532 418 aa4.86□□□□□ -1.63
CIITA-214ENST00000636238 SLC25A34Q6PIV7 304 aa4.86□□□□□ -1.63
CIITA-214ENST00000636238 C5orf38Q86SI9 138 aa4.86□□□□□ -1.63
CIITA-214ENST00000636238 LRP2P98164 4655 aa4.85□□□□□ -1.63
CIITA-214ENST00000636238 IGLV5-45A0A087WSX0 123 aa4.85□□□□□ -1.63
CIITA-214ENST00000636238 H3BRM9 83 aa4.85□□□□□ -1.63
CIITA-214ENST00000636238 LEPROTO15243 131 aa4.85□□□□□ -1.63
CIITA-214ENST00000636238 SEC11AP67812 179 aa4.85□□□□□ -1.63
CIITA-214ENST00000636238 ENHOQ6UWT2 76 aa4.85□□□□□ -1.63
CIITA-214ENST00000636238 BOD1L2Q8IYS8 172 aa4.85□□□□□ -1.63
CIITA-214ENST00000636238 CHCHD10Q8WYQ3 142 aaPredicted RBP4.85□□□□□ -1.63
CIITA-214ENST00000636238 UBE2WQ96B02 151 aa4.85□□□□□ -1.63
CIITA-214ENST00000636238 IGHV1-58A0A0C4DH39 117 aa4.84□□□□□ -1.63
CIITA-214ENST00000636238 GAGE12HA6NDE8 117 aa4.84□□□□□ -1.63
CIITA-214ENST00000636238 J3QQQ9 107 aa4.84□□□□□ -1.63
CIITA-214ENST00000636238 LGALS3P17931 250 aaKnown RBP4.84□□□□□ -1.63
CIITA-214ENST00000636238 HNRNPA3P51991 378 aaKnown RBP4.84□□□□□ -1.63
CIITA-214ENST00000636238 CTAG1AP78358 180 aa4.84□□□□□ -1.63
CIITA-214ENST00000636238 C2orf91Q6ZV80 131 aa4.84□□□□□ -1.63
CIITA-214ENST00000636238 SCXQ7RTU7 201 aa4.84□□□□□ -1.63
CIITA-214ENST00000636238 PLEKHB2Q96CS7 222 aa4.84□□□□□ -1.63
CIITA-214ENST00000636238 IGHV3OR16-9A0A0B4J2B5 98 aa4.83□□□□□ -1.64
CIITA-214ENST00000636238 MYMXA0A1B0GTQ4 84 aa4.83□□□□□ -1.64
CIITA-214ENST00000636238 ZNF815PA8K554 130 aa4.83□□□□□ -1.64
CIITA-214ENST00000636238 SMIM1B2RUZ4 78 aa4.83□□□□□ -1.64
CIITA-214ENST00000636238 CRPP02741 224 aa4.83□□□□□ -1.64
CIITA-214ENST00000636238 LCE2DQ5TA82 110 aaPredicted RBP4.83□□□□□ -1.64
CIITA-214ENST00000636238 RMI2Q96E14 147 aa4.83□□□□□ -1.64
CIITA-214ENST00000636238 PRR34Q9NV39 138 aa4.83□□□□□ -1.64
CIITA-214ENST00000636238 IGLV5-39A0A0G2JS06 123 aa4.82□□□□□ -1.64
CIITA-214ENST00000636238 DLEU1O43261 78 aa4.82□□□□□ -1.64
CIITA-214ENST00000636238 FOXI1Q12951 378 aa4.82□□□□□ -1.64
CIITA-214ENST00000636238 CD164L2Q6UWJ8 174 aa4.82□□□□□ -1.64
CIITA-214ENST00000636238 Q9HAA7 133 aa4.82□□□□□ -1.64
CIITA-214ENST00000636238 TOMM7Q9P0U1 55 aa4.82□□□□□ -1.64
CIITA-214ENST00000636238 TNXBP22105 4242 aa4.82□□□□□ -1.64
CIITA-214ENST00000636238 A0A087WZ39 114 aa4.81□□□□□ -1.64
CIITA-214ENST00000636238 TMEM238LA0A1B0GVL6 79 aa4.81□□□□□ -1.64
CIITA-214ENST00000636238 COX7A2LO14548 114 aa4.81□□□□□ -1.64
CIITA-214ENST00000636238 HINT1P49773 126 aaPredicted RBP4.81□□□□□ -1.64
CIITA-214ENST00000636238 MIAQ16674 131 aa4.81□□□□□ -1.64
CIITA-214ENST00000636238 Q6ZRU5 148 aa4.81□□□□□ -1.64
CIITA-214ENST00000636238 CIRBP-AS1Q8TBR5 109 aa4.81□□□□□ -1.64
CIITA-214ENST00000636238 COX7B2Q8TF08 81 aa4.81□□□□□ -1.64
CIITA-214ENST00000636238 KRTAP3-3Q9BYR6 98 aa4.81□□□□□ -1.64
CIITA-214ENST00000636238 KRTAP3-2Q9BYR7 98 aa4.81□□□□□ -1.64
CIITA-214ENST00000636238 IGKV2D-24A0A075B6R9 120 aa4.8□□□□□ -1.64
CIITA-214ENST00000636238 TRAV8-4A0A0B4J246 113 aa4.8□□□□□ -1.64
CIITA-214ENST00000636238 MALP21145 153 aa4.8□□□□□ -1.64
CIITA-214ENST00000636238 RPL37AP61513 92 aaKnown RBP4.8□□□□□ -1.64
CIITA-214ENST00000636238 BATFQ16520 125 aa4.8□□□□□ -1.64
CIITA-214ENST00000636238 C14orf177Q52M58 125 aa4.8□□□□□ -1.64
CIITA-214ENST00000636238 KRTAP26-1Q6PEX3 210 aa4.8□□□□□ -1.64
CIITA-214ENST00000636238 SCGB1D4Q6XE38 83 aa4.8□□□□□ -1.64
CIITA-214ENST00000636238 ORAOV1Q8WV07 137 aa4.8□□□□□ -1.64
CIITA-214ENST00000636238 ZNF625Q96I27 306 aaPredicted RBP4.8□□□□□ -1.64
CIITA-214ENST00000636238 NDUFA12Q9UI09 145 aa4.8□□□□□ -1.64
CIITA-214ENST00000636238 A0A0J9YXY3 114 aa4.79□□□□□ -1.64
CIITA-214ENST00000636238 LINC00526Q96FQ7 95 aa4.79□□□□□ -1.64
CIITA-214ENST00000636238 C1orf43Q9BWL3 253 aa4.79□□□□□ -1.64
CIITA-214ENST00000636238 HIGD1BQ9P298 99 aa4.79□□□□□ -1.64
CIITA-214ENST00000636238 A0A0U1RRA0 63 aa4.78□□□□□ -1.64
CIITA-214ENST00000636238 NDUFA1O15239 70 aa4.78□□□□□ -1.64
CIITA-214ENST00000636238 PRSS2P07478 247 aa4.78□□□□□ -1.64
CIITA-214ENST00000636238 MT1HL1P0DM35 61 aa4.78□□□□□ -1.64
CIITA-214ENST00000636238 WFDC2Q14508 124 aa4.78□□□□□ -1.64
CIITA-214ENST00000636238 C6orf226Q5I0X4 101 aa4.78□□□□□ -1.64
CIITA-214ENST00000636238 LINC01561Q8N1V8 128 aa4.78□□□□□ -1.64
CIITA-214ENST00000636238 SNHG12Q9BXW3 62 aa4.78□□□□□ -1.64
CIITA-214ENST00000636238 M0R143 59 aa4.77□□□□□ -1.65
CIITA-214ENST00000636238 HSD52Q0P140 79 aa4.77□□□□□ -1.65
CIITA-214ENST00000636238 KIAA0087Q14695 138 aa4.77□□□□□ -1.65
CIITA-214ENST00000636238 C21orf62-AS1Q17RA5 79 aa4.77□□□□□ -1.65
CIITA-214ENST00000636238 HIGD2BQ4VC39 106 aa4.77□□□□□ -1.65
CIITA-214ENST00000636238 BVES-AS1Q5T3Y7 98 aa4.77□□□□□ -1.65
CIITA-214ENST00000636238 CFAP161Q6P656 301 aa4.77□□□□□ -1.65
CIITA-214ENST00000636238 C2orf82Q6UX34 121 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms