RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 ZNF815PA8K554 130 aa6.31□□□□□ -1.4
CACNA1A-223ENST00000636058 NDUFA1O15239 70 aa6.31□□□□□ -1.4
CACNA1A-223ENST00000636058 CXCL5P42830 114 aa6.31□□□□□ -1.4
CACNA1A-223ENST00000636058 HIGD2BQ4VC39 106 aa6.31□□□□□ -1.4
CACNA1A-223ENST00000636058 C6orf226Q5I0X4 101 aa6.31□□□□□ -1.4
CACNA1A-223ENST00000636058 C1orf134Q5TEV5 83 aa6.31□□□□□ -1.4
CACNA1A-223ENST00000636058 NTN5Q8WTR8 489 aaPredicted RBP6.31□□□□□ -1.4
CACNA1A-223ENST00000636058 KMT2AQ03164 3969 aa6.31□□□□□ -1.4
CACNA1A-223ENST00000636058 LRCOL1A6NCL2 159 aa6.3□□□□□ -1.4
CACNA1A-223ENST00000636058 ZNF561-AS1K7EIQ3 104 aa6.3□□□□□ -1.4
CACNA1A-223ENST00000636058 CKS1BP61024 79 aa6.3□□□□□ -1.4
CACNA1A-223ENST00000636058 WFDC2Q14508 124 aa6.3□□□□□ -1.4
CACNA1A-223ENST00000636058 COL5A1-AS1Q5SY13 56 aa6.3□□□□□ -1.4
CACNA1A-223ENST00000636058 SFTA2Q6UW10 78 aa6.3□□□□□ -1.4
CACNA1A-223ENST00000636058 C2orf82Q6UX34 121 aa6.3□□□□□ -1.4
CACNA1A-223ENST00000636058 LINC00526Q96FQ7 95 aa6.3□□□□□ -1.4
CACNA1A-223ENST00000636058 DNAH10Q8IVF4 4471 aa6.29□□□□□ -1.4
CACNA1A-223ENST00000636058 SACSQ9NZJ4 4579 aa6.29□□□□□ -1.4
CACNA1A-223ENST00000636058 A0A0J9YXY3 114 aa6.29□□□□□ -1.4
CACNA1A-223ENST00000636058 LECT2O14960 151 aa6.29□□□□□ -1.4
CACNA1A-223ENST00000636058 HERV-K104P63124 156 aa6.29□□□□□ -1.4
CACNA1A-223ENST00000636058 C2orf48Q96LS8 159 aa6.29□□□□□ -1.4
CACNA1A-223ENST00000636058 DNAH2Q9P225 4427 aa6.28□□□□□ -1.4
CACNA1A-223ENST00000636058 F8WDY8 70 aa6.28□□□□□ -1.4
CACNA1A-223ENST00000636058 BATFQ16520 125 aa6.28□□□□□ -1.4
CACNA1A-223ENST00000636058 C2orf91Q6ZV80 131 aa6.28□□□□□ -1.4
CACNA1A-223ENST00000636058 C14orf177Q52M58 125 aa6.27□□□□□ -1.41
CACNA1A-223ENST00000636058 C10orf25Q5T742 122 aa6.27□□□□□ -1.41
CACNA1A-223ENST00000636058 UNQ6190/PRO20217Q6UXQ8 127 aa6.27□□□□□ -1.41
CACNA1A-223ENST00000636058 SCGB1D4Q6XE38 83 aa6.27□□□□□ -1.41
CACNA1A-223ENST00000636058 CAMK2N2Q96S95 79 aa6.27□□□□□ -1.41
CACNA1A-223ENST00000636058 A0A087WTM6 91 aa6.26□□□□□ -1.41
CACNA1A-223ENST00000636058 RTL8CO15255 209 aa6.26□□□□□ -1.41
CACNA1A-223ENST00000636058 SLPIP03973 132 aa6.26□□□□□ -1.41
CACNA1A-223ENST00000636058 SYCNQ0VAF6 134 aa6.26□□□□□ -1.41
CACNA1A-223ENST00000636058 Q6ZRU5 148 aa6.26□□□□□ -1.41
CACNA1A-223ENST00000636058 LITAFQ99732 161 aa6.26□□□□□ -1.41
CACNA1A-223ENST00000636058 HIGD1BQ9P298 99 aa6.26□□□□□ -1.41
CACNA1A-223ENST00000636058 C6orf48Q9UBA6 75 aa6.26□□□□□ -1.41
CACNA1A-223ENST00000636058 RYR2Q92736 4967 aa6.25□□□□□ -1.41
CACNA1A-223ENST00000636058 TRBV30A0A0K0K1B3 111 aa6.25□□□□□ -1.41
CACNA1A-223ENST00000636058 TIMM17BO60830 172 aa6.25□□□□□ -1.41
CACNA1A-223ENST00000636058 CNBPP62633 177 aaKnown RBP6.25□□□□□ -1.41
CACNA1A-223ENST00000636058 Q8N814 137 aa6.25□□□□□ -1.41
CACNA1A-223ENST00000636058 ERG28Q9UKR5 140 aa6.25□□□□□ -1.41
CACNA1A-223ENST00000636058 DNAH17Q9UFH2 4485 aa6.24□□□□□ -1.41
CACNA1A-223ENST00000636058 TMEM238C9JI98 176 aa6.24□□□□□ -1.41
CACNA1A-223ENST00000636058 CIRBPQ14011 172 aaKnown RBP6.24□□□□□ -1.41
CACNA1A-223ENST00000636058 COX17Q14061 63 aa6.24□□□□□ -1.41
CACNA1A-223ENST00000636058 RNF151Q2KHN1 245 aa6.24□□□□□ -1.41
CACNA1A-223ENST00000636058 MEIG1Q5JSS6 88 aa6.24□□□□□ -1.41
CACNA1A-223ENST00000636058 CARD19Q96LW7 228 aa6.24□□□□□ -1.41
CACNA1A-223ENST00000636058 SPANXB1Q9NS25 103 aaPredicted RBP6.24□□□□□ -1.41
CACNA1A-223ENST00000636058 KMT2CQ8NEZ4 4911 aaKnown RBP6.23□□□□□ -1.41
CACNA1A-223ENST00000636058 SMIM13P0DJ93 91 aa6.23□□□□□ -1.41
CACNA1A-223ENST00000636058 HINT1P49773 126 aaPredicted RBP6.23□□□□□ -1.41
CACNA1A-223ENST00000636058 TNP2Q05952 138 aa6.23□□□□□ -1.41
CACNA1A-223ENST00000636058 C9orf116Q5BN46 136 aaPredicted RBP6.23□□□□□ -1.41
CACNA1A-223ENST00000636058 ADAMTSL4-AS1Q5T5F5 129 aa6.23□□□□□ -1.41
CACNA1A-223ENST00000636058 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.22□□□□□ -1.41
CACNA1A-223ENST00000636058 PFN2P35080 140 aa6.22□□□□□ -1.41
CACNA1A-223ENST00000636058 LINC00158P58513 81 aa6.22□□□□□ -1.41
CACNA1A-223ENST00000636058 SPANXDQ9BXN6 97 aa6.22□□□□□ -1.41
CACNA1A-223ENST00000636058 SPANXCQ9NY87 97 aa6.22□□□□□ -1.41
CACNA1A-223ENST00000636058 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.21□□□□□ -1.42
CACNA1A-223ENST00000636058 A0A0U1RRA0 63 aa6.21□□□□□ -1.42
CACNA1A-223ENST00000636058 HSD52Q0P140 79 aa6.21□□□□□ -1.42
CACNA1A-223ENST00000636058 TAL2Q16559 108 aa6.21□□□□□ -1.42
CACNA1A-223ENST00000636058 Q6ZVH6 145 aa6.21□□□□□ -1.42
CACNA1A-223ENST00000636058 MIR7-3HGQ8N6C7 128 aa6.21□□□□□ -1.42
CACNA1A-223ENST00000636058 DAND5Q8N907 189 aa6.21□□□□□ -1.42
CACNA1A-223ENST00000636058 NDUFC2-KCTD14E9PQ53 114 aa6.2□□□□□ -1.42
CACNA1A-223ENST00000636058 TLX1NBP0CAT3 122 aa6.2□□□□□ -1.42
CACNA1A-223ENST00000636058 PTTG1IPP53801 180 aa6.2□□□□□ -1.42
CACNA1A-223ENST00000636058 SRSF9Q13242 221 aaKnown RBP eCLIP6.2□□□□□ -1.42
CACNA1A-223ENST00000636058 HIST1H4GQ99525 98 aa6.2□□□□□ -1.42
CACNA1A-223ENST00000636058 IFITM1P13164 125 aa6.19□□□□□ -1.42
CACNA1A-223ENST00000636058 BVES-AS1Q5T3Y7 98 aa6.19□□□□□ -1.42
CACNA1A-223ENST00000636058 C9orf163Q8N9P6 203 aa6.19□□□□□ -1.42
CACNA1A-223ENST00000636058 LINC00308Q8TCZ7 52 aa6.19□□□□□ -1.42
CACNA1A-223ENST00000636058 PPDPFQ9H3Y8 114 aa6.19□□□□□ -1.42
CACNA1A-223ENST00000636058 FRAS1Q86XX4 4008 aa6.19□□□□□ -1.42
CACNA1A-223ENST00000636058 LOC107984156A0A0G2JMH3 177 aa6.18□□□□□ -1.42
CACNA1A-223ENST00000636058 EIF4EBP3O60516 100 aaPredicted RBP6.18□□□□□ -1.42
CACNA1A-223ENST00000636058 SOSTDC1Q6X4U4 206 aa6.18□□□□□ -1.42
CACNA1A-223ENST00000636058 Q6ZRP5 223 aa6.18□□□□□ -1.42
CACNA1A-223ENST00000636058 LINC00336Q6ZUF6 198 aa6.18□□□□□ -1.42
CACNA1A-223ENST00000636058 MUSTN1Q8IVN3 82 aa6.18□□□□□ -1.42
CACNA1A-223ENST00000636058 ARL17AQ8IVW1 177 aa6.18□□□□□ -1.42
CACNA1A-223ENST00000636058 CEND1Q8N111 149 aa6.18□□□□□ -1.42
CACNA1A-223ENST00000636058 SND1-IT1Q9HBX3 110 aa6.18□□□□□ -1.42
CACNA1A-223ENST00000636058 FAT2Q9NYQ8 4349 aa6.18□□□□□ -1.42
CACNA1A-223ENST00000636058 LOC107984640A0A0U1RRK4 108 aa6.17□□□□□ -1.42
CACNA1A-223ENST00000636058 A6NDN8 102 aa6.17□□□□□ -1.42
CACNA1A-223ENST00000636058 GCSHP23434 173 aa6.17□□□□□ -1.42
CACNA1A-223ENST00000636058 NPC2P61916 151 aa6.17□□□□□ -1.42
CACNA1A-223ENST00000636058 COPS9Q8WXC6 57 aa6.17□□□□□ -1.42
CACNA1A-223ENST00000636058 RPL18AQ02543 176 aaKnown RBP6.16□□□□□ -1.42
CACNA1A-223ENST00000636058 PKIGQ9Y2B9 76 aa6.16□□□□□ -1.42
CACNA1A-223ENST00000636058 IGLV5-52A0A0A0MRZ9 124 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms