RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 PRSS2P07478 247 aa11.34□□□□□ -0.59
CLN6-210ENST00000635747 RAB5BP61020 215 aa11.34□□□□□ -0.59
CLN6-210ENST00000635747 MT1HL1P0DM35 61 aa11.33□□□□□ -0.6
CLN6-210ENST00000635747 SCGB3A1Q96QR1 104 aa11.33□□□□□ -0.6
CLN6-210ENST00000635747 GEMIN7Q9H840 131 aaKnown RBP11.33□□□□□ -0.6
CLN6-210ENST00000635747 C6orf226Q5I0X4 101 aa11.32□□□□□ -0.6
CLN6-210ENST00000635747 REG3GQ6UW15 175 aa11.32□□□□□ -0.6
CLN6-210ENST00000635747 FA2HQ7L5A8 372 aa11.32□□□□□ -0.6
CLN6-210ENST00000635747 CKS1BP61024 79 aa11.31□□□□□ -0.6
CLN6-210ENST00000635747 SRSF9Q13242 221 aaKnown RBP eCLIP11.31□□□□□ -0.6
CLN6-210ENST00000635747 Q8IZM0 81 aa11.31□□□□□ -0.6
CLN6-210ENST00000635747 LINC01600Q96MT4 127 aa11.31□□□□□ -0.6
CLN6-210ENST00000635747 NDUFC2-KCTD14E9PQ53 114 aa11.3□□□□□ -0.6
CLN6-210ENST00000635747 LINC00614P0C842 121 aa11.3□□□□□ -0.6
CLN6-210ENST00000635747 GAGE2EQ4V326 116 aa11.3□□□□□ -0.6
CLN6-210ENST00000635747 C2orf82Q6UX34 121 aa11.3□□□□□ -0.6
CLN6-210ENST00000635747 TOMM7Q9P0U1 55 aa11.3□□□□□ -0.6
CLN6-210ENST00000635747 GAGE2DQ9UEU5 116 aa11.3□□□□□ -0.6
CLN6-210ENST00000635747 PHF5AQ7RTV0 110 aaKnown RBP11.29□□□□□ -0.6
CLN6-210ENST00000635747 CHCHD1Q96BP2 118 aaKnown RBP11.29□□□□□ -0.6
CLN6-210ENST00000635747 CDKN2A-AS1Q9UH64 79 aa11.29□□□□□ -0.6
CLN6-210ENST00000635747 PSORS1C2Q9UIG4 136 aa11.29□□□□□ -0.6
CLN6-210ENST00000635747 HMCN2Q8NDA2 5059 aa11.29□□□□□ -0.6
CLN6-210ENST00000635747 URB1-AS1Q96HZ7 61 aa11.27□□□□□ -0.61
CLN6-210ENST00000635747 PLA2G2DQ9UNK4 145 aa11.27□□□□□ -0.61
CLN6-210ENST00000635747 TINCRA0A1B0GVN0 87 aa11.26□□□□□ -0.61
CLN6-210ENST00000635747 BAGE3Q86Y29 109 aa11.26□□□□□ -0.61
CLN6-210ENST00000635747 FAM168BA1KXE4 195 aa11.25□□□□□ -0.61
CLN6-210ENST00000635747 HIST1H2BKO60814 126 aa11.25□□□□□ -0.61
CLN6-210ENST00000635747 HIST1H2BJP06899 126 aa11.25□□□□□ -0.61
CLN6-210ENST00000635747 HIST1H2BOP23527 126 aa11.25□□□□□ -0.61
CLN6-210ENST00000635747 HIST1H2BBP33778 126 aa11.25□□□□□ -0.61
CLN6-210ENST00000635747 CXCL5P42830 114 aa11.25□□□□□ -0.61
CLN6-210ENST00000635747 HIST1H2BDP58876 126 aa11.25□□□□□ -0.61
CLN6-210ENST00000635747 HIST1H2BCP62807 126 aa11.25□□□□□ -0.61
CLN6-210ENST00000635747 HIST2H2BEQ16778 126 aa11.25□□□□□ -0.61
CLN6-210ENST00000635747 C1orf137Q5JT78 98 aa11.25□□□□□ -0.61
CLN6-210ENST00000635747 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.25□□□□□ -0.61
CLN6-210ENST00000635747 FAM19A5Q7Z5A7 132 aaPredicted RBP11.25□□□□□ -0.61
CLN6-210ENST00000635747 LINC00469Q8N7U9 141 aa11.25□□□□□ -0.61
CLN6-210ENST00000635747 HIST1H2BHQ93079 126 aa11.25□□□□□ -0.61
CLN6-210ENST00000635747 HIST1H2BNQ99877 126 aa11.25□□□□□ -0.61
CLN6-210ENST00000635747 HIST1H2BMQ99879 126 aa11.25□□□□□ -0.61
CLN6-210ENST00000635747 CST9LQ9H4G1 147 aa11.25□□□□□ -0.61
CLN6-210ENST00000635747 F8VRH5 84 aa11.24□□□□□ -0.61
CLN6-210ENST00000635747 PMVKQ15126 192 aa11.24□□□□□ -0.61
CLN6-210ENST00000635747 TNXBP22105 4242 aa11.24□□□□□ -0.61
CLN6-210ENST00000635747 PDZD11Q5EBL8 140 aa11.23□□□□□ -0.61
CLN6-210ENST00000635747 M0QXV9 152 aa11.22□□□□□ -0.61
CLN6-210ENST00000635747 HBDP02042 147 aa11.22□□□□□ -0.61
CLN6-210ENST00000635747 IGLV5-45A0A087WSX0 123 aa11.21□□□□□ -0.61
CLN6-210ENST00000635747 A0A096LNJ9 63 aa11.2□□□□□ -0.62
CLN6-210ENST00000635747 SMIM1B2RUZ4 78 aa11.2□□□□□ -0.62
CLN6-210ENST00000635747 HSBP1O75506 76 aa11.2□□□□□ -0.62
CLN6-210ENST00000635747 UBE2BP63146 152 aa11.2□□□□□ -0.62
CLN6-210ENST00000635747 COA6Q5JTJ3 125 aaKnown RBP11.2□□□□□ -0.62
CLN6-210ENST00000635747 C9orf129Q5T035 196 aaKnown RBP11.2□□□□□ -0.62
CLN6-210ENST00000635747 H3BRM9 83 aa11.19□□□□□ -0.62
CLN6-210ENST00000635747 SERF1AO75920 110 aa11.19□□□□□ -0.62
CLN6-210ENST00000635747 IGLV7-43P04211 117 aa11.19□□□□□ -0.62
CLN6-210ENST00000635747 LINC00310P59036 64 aa11.19□□□□□ -0.62
CLN6-210ENST00000635747 ODF1Q14990 250 aa11.19□□□□□ -0.62
CLN6-210ENST00000635747 COX7B2Q8TF08 81 aa11.19□□□□□ -0.62
CLN6-210ENST00000635747 DIRC1Q969H9 104 aa11.19□□□□□ -0.62
CLN6-210ENST00000635747 KRTAP10-8P60410 259 aa11.18□□□□□ -0.62
CLN6-210ENST00000635747 KRTAP7-1Q8IUC3 87 aa11.18□□□□□ -0.62
CLN6-210ENST00000635747 ATP5LO75964 103 aa11.16□□□□□ -0.62
CLN6-210ENST00000635747 LBHQ53QV2 105 aaPredicted RBP11.16□□□□□ -0.62
CLN6-210ENST00000635747 NDUFA6P56556 154 aa11.15□□□□□ -0.62
CLN6-210ENST00000635747 PMCHL1Q16048 86 aa11.15□□□□□ -0.62
CLN6-210ENST00000635747 SPINK8P0C7L1 97 aa11.14□□□□□ -0.63
CLN6-210ENST00000635747 IGLC3P0DOY3 106 aa11.14□□□□□ -0.63
CLN6-210ENST00000635747 KRTAP11-1Q8IUC1 163 aa11.14□□□□□ -0.63
CLN6-210ENST00000635747 XAGE1AQ9HD64 81 aa11.14□□□□□ -0.63
CLN6-210ENST00000635747 C22orf24Q9Y442 160 aa11.14□□□□□ -0.63
CLN6-210ENST00000635747 NUPR1O60356 82 aa11.13□□□□□ -0.63
CLN6-210ENST00000635747 TP73-AS1Q9UF72 201 aa11.13□□□□□ -0.63
CLN6-210ENST00000635747 H0Y9J4 135 aa11.12□□□□□ -0.63
CLN6-210ENST00000635747 FAM19A2Q8N3H0 131 aa11.12□□□□□ -0.63
CLN6-210ENST00000635747 LEPROTL1O95214 131 aa11.1□□□□□ -0.63
CLN6-210ENST00000635747 HSPB8Q9UJY1 196 aa11.1□□□□□ -0.63
CLN6-210ENST00000635747 IGLV5-39A0A0G2JS06 123 aa11.09□□□□□ -0.63
CLN6-210ENST00000635747 MRPL55Q7Z7F7 128 aaKnown RBP11.09□□□□□ -0.63
CLN6-210ENST00000635747 IFI27L1Q96BM0 104 aa11.09□□□□□ -0.63
CLN6-210ENST00000635747 ZNF22P17026 224 aaPredicted RBP11.08□□□□□ -0.64
CLN6-210ENST00000635747 TRAV12-1A0A0B4J245 112 aa11.07□□□□□ -0.64
CLN6-210ENST00000635747 SFTA2Q6UW10 78 aa11.07□□□□□ -0.64
CLN6-210ENST00000635747 S100A6P06703 90 aa11.06□□□□□ -0.64
CLN6-210ENST00000635747 ZNF861PO60384 105 aa11.05□□□□□ -0.64
CLN6-210ENST00000635747 UBR4Q5T4S7 5183 aa11.05□□□□□ -0.64
CLN6-210ENST00000635747 IGLV1-50A0A075B6I6 118 aa11.04□□□□□ -0.64
CLN6-210ENST00000635747 COX17Q14061 63 aa11.04□□□□□ -0.64
CLN6-210ENST00000635747 TMEM170BQ5T4T1 132 aa11.04□□□□□ -0.64
CLN6-210ENST00000635747 IGLV5-37A0A075B6J1 123 aa11.03□□□□□ -0.64
CLN6-210ENST00000635747 FABP4P15090 132 aa11.03□□□□□ -0.64
CLN6-210ENST00000635747 NKAPP1Q8N9T2 125 aa11.03□□□□□ -0.64
CLN6-210ENST00000635747 CHTOPQ9Y3Y2 248 aaKnown RBP11.03□□□□□ -0.64
CLN6-210ENST00000635747 C11orf86A6NJI1 115 aa11.02□□□□□ -0.65
CLN6-210ENST00000635747 PRR26Q8N8Z3 221 aa11.02□□□□□ -0.65
CLN6-210ENST00000635747 LINC00167Q96N53 147 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms