RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 A0A0G2JQZ4 141 aa2.76□□□□□ -1.97
LINC00649-220ENST00000628906 POLR2KP53803 58 aaKnown RBP2.76□□□□□ -1.97
LINC00649-220ENST00000628906 CKS1BP61024 79 aa2.76□□□□□ -1.97
LINC00649-220ENST00000628906 UBE2G1P62253 170 aa2.76□□□□□ -1.97
LINC00649-220ENST00000628906 TEX261Q6UWH6 196 aa2.76□□□□□ -1.97
LINC00649-220ENST00000628906 LINC01561Q8N1V8 128 aa2.76□□□□□ -1.97
LINC00649-220ENST00000628906 URB1-AS1Q96HZ7 61 aa2.76□□□□□ -1.97
LINC00649-220ENST00000628906 TIMM17AQ99595 171 aa2.76□□□□□ -1.97
LINC00649-220ENST00000628906 ALKBH7Q9BT30 221 aaPredicted RBP2.76□□□□□ -1.97
LINC00649-220ENST00000628906 TRBV27A0A0K0K1C4 114 aa2.75□□□□□ -1.97
LINC00649-220ENST00000628906 F2Z2F3 143 aa2.75□□□□□ -1.97
LINC00649-220ENST00000628906 NDUFB6O95139 128 aa2.75□□□□□ -1.97
LINC00649-220ENST00000628906 CDC34P49427 236 aaPredicted RBP2.75□□□□□ -1.97
LINC00649-220ENST00000628906 NEDD8Q15843 81 aa2.75□□□□□ -1.97
LINC00649-220ENST00000628906 C6orf226Q5I0X4 101 aa2.75□□□□□ -1.97
LINC00649-220ENST00000628906 C1orf195Q5TG92 126 aa2.75□□□□□ -1.97
LINC00649-220ENST00000628906 TPPP3Q9BW30 176 aa2.75□□□□□ -1.97
LINC00649-220ENST00000628906 NKX6-2Q9C056 277 aaPredicted RBP2.75□□□□□ -1.97
LINC00649-220ENST00000628906 MUC5BQ9HC84 5762 aaPredicted RBP2.74□□□□□ -1.97
LINC00649-220ENST00000628906 PRSS47A8MTI9 375 aa2.74□□□□□ -1.97
LINC00649-220ENST00000628906 F8VRH5 84 aa2.74□□□□□ -1.97
LINC00649-220ENST00000628906 CXorf1O96002 111 aa2.74□□□□□ -1.97
LINC00649-220ENST00000628906 VBP1P61758 197 aa2.74□□□□□ -1.97
LINC00649-220ENST00000628906 KRTAP8-1Q8IUC2 63 aa2.74□□□□□ -1.97
LINC00649-220ENST00000628906 NUDT15Q9NV35 164 aa2.74□□□□□ -1.97
LINC00649-220ENST00000628906 INMT-MINDY4F8WBC2 141 aa2.73□□□□□ -1.97
LINC00649-220ENST00000628906 RGS5O15539 181 aa2.73□□□□□ -1.97
LINC00649-220ENST00000628906 PRSS2P07478 247 aa2.73□□□□□ -1.97
LINC00649-220ENST00000628906 FHITP49789 147 aa2.73□□□□□ -1.97
LINC00649-220ENST00000628906 AP3S2P59780 193 aa2.73□□□□□ -1.97
LINC00649-220ENST00000628906 Q5XG85 94 aa2.73□□□□□ -1.97
LINC00649-220ENST00000628906 Q8IZM0 81 aa2.73□□□□□ -1.97
LINC00649-220ENST00000628906 SCGB1C1Q8TD33 95 aa2.73□□□□□ -1.97
LINC00649-220ENST00000628906 MED9Q9NWA0 146 aa2.73□□□□□ -1.97
LINC00649-220ENST00000628906 IGKV2D-30A0A075B6S6 120 aa2.72□□□□□ -1.97
LINC00649-220ENST00000628906 LOC107984156A0A0G2JMH3 177 aa2.72□□□□□ -1.97
LINC00649-220ENST00000628906 FAM74A7A6NL05 159 aa2.72□□□□□ -1.97
LINC00649-220ENST00000628906 VPREB1P12018 145 aa2.72□□□□□ -1.97
LINC00649-220ENST00000628906 DEFA1P59665 94 aa2.72□□□□□ -1.97
LINC00649-220ENST00000628906 AKAP14Q86UN6 197 aa2.72□□□□□ -1.97
LINC00649-220ENST00000628906 ARL17AQ8IVW1 177 aa2.72□□□□□ -1.97
LINC00649-220ENST00000628906 TOMM5Q8N4H5 51 aa2.72□□□□□ -1.97
LINC00649-220ENST00000628906 CNFNQ9BYD5 112 aa2.72□□□□□ -1.97
LINC00649-220ENST00000628906 ST20Q9HBF5 79 aa2.72□□□□□ -1.97
LINC00649-220ENST00000628906 RBM12B-AS1Q9P1G2 102 aa2.72□□□□□ -1.97
LINC00649-220ENST00000628906 MRPS36P82909 103 aaKnown RBP2.71□□□□□ -1.98
LINC00649-220ENST00000628906 C9orf153Q5TBE3 101 aa2.71□□□□□ -1.98
LINC00649-220ENST00000628906 Q5VV11 94 aa2.71□□□□□ -1.98
LINC00649-220ENST00000628906 HRCT1Q6UXD1 115 aa2.71□□□□□ -1.98
LINC00649-220ENST00000628906 Q6ZN92 141 aa2.71□□□□□ -1.98
LINC00649-220ENST00000628906 C9orf62Q8N4C0 152 aa2.71□□□□□ -1.98
LINC00649-220ENST00000628906 TOMM7Q9P0U1 55 aa2.71□□□□□ -1.98
LINC00649-220ENST00000628906 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
LINC00649-220ENST00000628906 IFITM10A6NMD0 228 aa2.7□□□□□ -1.98
LINC00649-220ENST00000628906 SIX6O95475 246 aa2.7□□□□□ -1.98
LINC00649-220ENST00000628906 HBBP68871 147 aa2.7□□□□□ -1.98
LINC00649-220ENST00000628906 Q1RN00 199 aa2.7□□□□□ -1.98
LINC00649-220ENST00000628906 KRTAP19-8Q3LI54 63 aa2.7□□□□□ -1.98
LINC00649-220ENST00000628906 TCEAL7Q9BRU2 100 aa2.7□□□□□ -1.98
LINC00649-220ENST00000628906 VCYO14598 125 aa2.69□□□□□ -1.98
LINC00649-220ENST00000628906 ERC2-IT1O76042 136 aa2.69□□□□□ -1.98
LINC00649-220ENST00000628906 S100A9P06702 114 aaKnown RBP2.69□□□□□ -1.98
LINC00649-220ENST00000628906 HRES1P13985 223 aa2.69□□□□□ -1.98
LINC00649-220ENST00000628906 FCER1GP30273 86 aa2.69□□□□□ -1.98
LINC00649-220ENST00000628906 SPRR1AP35321 89 aa2.69□□□□□ -1.98
LINC00649-220ENST00000628906 CD164Q04900 197 aa2.69□□□□□ -1.98
LINC00649-220ENST00000628906 SMIM29Q86T20 159 aa2.69□□□□□ -1.98
LINC00649-220ENST00000628906 BAGE2Q86Y30 109 aa2.69□□□□□ -1.98
LINC00649-220ENST00000628906 TMEM18Q96B42 140 aa2.69□□□□□ -1.98
LINC00649-220ENST00000628906 AKR1C3P42330 323 aa2.68□□□□□ -1.98
LINC00649-220ENST00000628906 CXCL5P42830 114 aa2.68□□□□□ -1.98
LINC00649-220ENST00000628906 MT4P47944 62 aa2.68□□□□□ -1.98
LINC00649-220ENST00000628906 RPL24P83731 157 aaKnown RBP2.68□□□□□ -1.98
LINC00649-220ENST00000628906 FUNDC2Q9BWH2 189 aa2.68□□□□□ -1.98
LINC00649-220ENST00000628906 XKRY2A2RUG3 117 aa2.67□□□□□ -1.98
LINC00649-220ENST00000628906 PPP1R2P9O14990 202 aa2.67□□□□□ -1.98
LINC00649-220ENST00000628906 ATP6V0CP27449 155 aa2.67□□□□□ -1.98
LINC00649-220ENST00000628906 ZCCHC13Q8WW36 166 aaKnown RBP2.67□□□□□ -1.98
LINC00649-220ENST00000628906 ACTR3CQ9C0K3 210 aaPredicted RBP2.67□□□□□ -1.98
LINC00649-220ENST00000628906 SPANXA1Q9NS26 97 aa2.67□□□□□ -1.98
LINC00649-220ENST00000628906 NDUFA13Q9P0J0 144 aa2.67□□□□□ -1.98
LINC00649-220ENST00000628906 PYGO1Q9Y3Y4 419 aa2.67□□□□□ -1.98
LINC00649-220ENST00000628906 MBP02144 154 aa2.66□□□□□ -1.98
LINC00649-220ENST00000628906 RAB5BP61020 215 aa2.66□□□□□ -1.98
LINC00649-220ENST00000628906 RPL39P62891 51 aaKnown RBP2.66□□□□□ -1.98
LINC00649-220ENST00000628906 SMIM15Q7Z3B0 74 aa2.66□□□□□ -1.98
LINC00649-220ENST00000628906 Q8NDZ9 215 aa2.66□□□□□ -1.98
LINC00649-220ENST00000628906 OBSCN-AS1Q96MR7 158 aa2.66□□□□□ -1.98
LINC00649-220ENST00000628906 HSPB11Q9Y547 144 aa2.66□□□□□ -1.98
LINC00649-220ENST00000628906 KRTAP16-1A8MUX0 517 aa2.65□□□□□ -1.99
LINC00649-220ENST00000628906 A8MWL6 223 aa2.65□□□□□ -1.99
LINC00649-220ENST00000628906 SERF2P84101 59 aa2.65□□□□□ -1.99
LINC00649-220ENST00000628906 STOML3Q8TAV4 291 aa2.65□□□□□ -1.99
LINC00649-220ENST00000628906 SMIM3Q9BZL3 60 aa2.65□□□□□ -1.99
LINC00649-220ENST00000628906 TNFSF18Q9UNG2 199 aa2.65□□□□□ -1.99
LINC00649-220ENST00000628906 NAP1L6A6NFF2 107 aa2.64□□□□□ -1.99
LINC00649-220ENST00000628906 ZNF726P1Q15940 193 aa2.64□□□□□ -1.99
LINC00649-220ENST00000628906 NOTCH2NLQ7Z3S9 236 aa2.64□□□□□ -1.99
LINC00649-220ENST00000628906 PSMG3Q9BT73 122 aaPredicted RBP2.64□□□□□ -1.99
LINC00649-220ENST00000628906 EIF5A2Q9GZV4 153 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms