RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 PRSS2P07478 247 aa4.7□□□□□ -1.66
CBWD3-219ENST00000622817 HERV-K104P63124 156 aa4.7□□□□□ -1.66
CBWD3-219ENST00000622817 BATFQ16520 125 aa4.7□□□□□ -1.66
CBWD3-219ENST00000622817 SFTA2Q6UW10 78 aa4.7□□□□□ -1.66
CBWD3-219ENST00000622817 HIST1H4GQ99525 98 aa4.7□□□□□ -1.66
CBWD3-219ENST00000622817 C1orf43Q9BWL3 253 aa4.7□□□□□ -1.66
CBWD3-219ENST00000622817 TMEM238C9JI98 176 aa4.69□□□□□ -1.66
CBWD3-219ENST00000622817 TIMM17BO60830 172 aa4.69□□□□□ -1.66
CBWD3-219ENST00000622817 SRSF9Q13242 221 aaKnown RBP eCLIP4.69□□□□□ -1.66
CBWD3-219ENST00000622817 LBHQ53QV2 105 aaPredicted RBP4.69□□□□□ -1.66
CBWD3-219ENST00000622817 C6orf226Q5I0X4 101 aa4.69□□□□□ -1.66
CBWD3-219ENST00000622817 BVES-AS1Q5T3Y7 98 aa4.69□□□□□ -1.66
CBWD3-219ENST00000622817 Q8IZM0 81 aa4.69□□□□□ -1.66
CBWD3-219ENST00000622817 MUC7Q8TAX7 377 aa4.69□□□□□ -1.66
CBWD3-219ENST00000622817 ORAOV1Q8WV07 137 aa4.69□□□□□ -1.66
CBWD3-219ENST00000622817 RMI2Q96E14 147 aa4.69□□□□□ -1.66
CBWD3-219ENST00000622817 ZNF625Q96I27 306 aaPredicted RBP4.69□□□□□ -1.66
CBWD3-219ENST00000622817 SPANXB1Q9NS25 103 aaPredicted RBP4.69□□□□□ -1.66
CBWD3-219ENST00000622817 IGKV2D-24A0A075B6R9 120 aa4.69□□□□□ -1.66
CBWD3-219ENST00000622817 CIRBPQ14011 172 aaKnown RBP4.69□□□□□ -1.66
CBWD3-219ENST00000622817 CFAP161Q6P656 301 aa4.69□□□□□ -1.66
CBWD3-219ENST00000622817 KRTAP26-1Q6PEX3 210 aa4.69□□□□□ -1.66
CBWD3-219ENST00000622817 GCSHP23434 173 aa4.68□□□□□ -1.66
CBWD3-219ENST00000622817 CXCL5P42830 114 aa4.68□□□□□ -1.66
CBWD3-219ENST00000622817 CKS1BP61024 79 aa4.68□□□□□ -1.66
CBWD3-219ENST00000622817 CEND1Q8N111 149 aa4.68□□□□□ -1.66
CBWD3-219ENST00000622817 TM2D2Q9BX73 214 aa4.68□□□□□ -1.66
CBWD3-219ENST00000622817 Q9HAA7 133 aa4.68□□□□□ -1.66
CBWD3-219ENST00000622817 DNAH7Q8WXX0 4024 aa4.67□□□□□ -1.66
CBWD3-219ENST00000622817 A6NDN8 102 aa4.67□□□□□ -1.66
CBWD3-219ENST00000622817 SPAG11BQ08648 103 aa4.67□□□□□ -1.66
CBWD3-219ENST00000622817 KIAA0087Q14695 138 aa4.67□□□□□ -1.66
CBWD3-219ENST00000622817 COL5A1-AS1Q5SY13 56 aa4.67□□□□□ -1.66
CBWD3-219ENST00000622817 Q6ZVH6 145 aa4.67□□□□□ -1.66
CBWD3-219ENST00000622817 WWC2-AS2Q96NR7 200 aa4.67□□□□□ -1.66
CBWD3-219ENST00000622817 LITAFQ99732 161 aa4.67□□□□□ -1.66
CBWD3-219ENST00000622817 DYNC2H1Q8NCM8 4307 aaKnown RBP4.67□□□□□ -1.66
CBWD3-219ENST00000622817 PTTG1IPP53801 180 aa4.66□□□□□ -1.66
CBWD3-219ENST00000622817 MEIG1Q5JSS6 88 aa4.66□□□□□ -1.66
CBWD3-219ENST00000622817 SPANXDQ9BXN6 97 aa4.66□□□□□ -1.66
CBWD3-219ENST00000622817 SPANXCQ9NY87 97 aa4.66□□□□□ -1.66
CBWD3-219ENST00000622817 COX11Q9Y6N1 276 aa4.66□□□□□ -1.66
CBWD3-219ENST00000622817 IFITM1P13164 125 aa4.66□□□□□ -1.66
CBWD3-219ENST00000622817 TTC32Q5I0X7 151 aa4.66□□□□□ -1.66
CBWD3-219ENST00000622817 ADAMTSL4-AS1Q5T5F5 129 aa4.66□□□□□ -1.66
CBWD3-219ENST00000622817 COPS9Q8WXC6 57 aa4.66□□□□□ -1.66
CBWD3-219ENST00000622817 TGP01266 2768 aa4.66□□□□□ -1.66
CBWD3-219ENST00000622817 TENM2Q9NT68 2774 aa4.66□□□□□ -1.66
CBWD3-219ENST00000622817 SMIM13P0DJ93 91 aa4.65□□□□□ -1.66
CBWD3-219ENST00000622817 FXYD2P54710 66 aa4.65□□□□□ -1.66
CBWD3-219ENST00000622817 C2orf82Q6UX34 121 aa4.65□□□□□ -1.66
CBWD3-219ENST00000622817 CSMD3Q7Z407 3707 aa4.65□□□□□ -1.67
CBWD3-219ENST00000622817 NBDYA0A0U1RRE5 68 aa4.64□□□□□ -1.67
CBWD3-219ENST00000622817 F8WDY8 70 aa4.64□□□□□ -1.67
CBWD3-219ENST00000622817 LINC00158P58513 81 aa4.64□□□□□ -1.67
CBWD3-219ENST00000622817 RPL24P83731 157 aaKnown RBP4.64□□□□□ -1.67
CBWD3-219ENST00000622817 LCE1DQ5T752 114 aa4.64□□□□□ -1.67
CBWD3-219ENST00000622817 MUSTN1Q8IVN3 82 aa4.64□□□□□ -1.67
CBWD3-219ENST00000622817 C15orf56Q8N910 161 aa4.64□□□□□ -1.67
CBWD3-219ENST00000622817 NTN5Q8WTR8 489 aaPredicted RBP4.64□□□□□ -1.67
CBWD3-219ENST00000622817 KRTAP1-5Q9BYS1 174 aa4.64□□□□□ -1.67
CBWD3-219ENST00000622817 ERG28Q9UKR5 140 aa4.64□□□□□ -1.67
CBWD3-219ENST00000622817 GVQW2A0A096LPI5 108 aaPredicted RBP4.64□□□□□ -1.67
CBWD3-219ENST00000622817 A0A0U1RRA0 63 aa4.64□□□□□ -1.67
CBWD3-219ENST00000622817 C6orf223Q8N319 242 aa4.64□□□□□ -1.67
CBWD3-219ENST00000622817 C2orf48Q96LS8 159 aa4.64□□□□□ -1.67
CBWD3-219ENST00000622817 C3orf84H3BNL1 204 aa4.63□□□□□ -1.67
CBWD3-219ENST00000622817 PFN2P35080 140 aa4.63□□□□□ -1.67
CBWD3-219ENST00000622817 COX17Q14061 63 aa4.63□□□□□ -1.67
CBWD3-219ENST00000622817 HIGD2BQ4VC39 106 aa4.63□□□□□ -1.67
CBWD3-219ENST00000622817 UNQ6190/PRO20217Q6UXQ8 127 aa4.63□□□□□ -1.67
CBWD3-219ENST00000622817 DAND5Q8N907 189 aa4.63□□□□□ -1.67
CBWD3-219ENST00000622817 LINC00308Q8TCZ7 52 aa4.63□□□□□ -1.67
CBWD3-219ENST00000622817 KRTAP17-1Q9BYP8 105 aa4.63□□□□□ -1.67
CBWD3-219ENST00000622817 PPDPFQ9H3Y8 114 aa4.63□□□□□ -1.67
CBWD3-219ENST00000622817 NHP2Q9NX24 153 aaKnown RBP4.63□□□□□ -1.67
CBWD3-219ENST00000622817 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.62□□□□□ -1.67
CBWD3-219ENST00000622817 A0A1B0GWB2 263 aa4.62□□□□□ -1.67
CBWD3-219ENST00000622817 USP17L23D6RBM5 183 aa4.62□□□□□ -1.67
CBWD3-219ENST00000622817 CASC10Q5T4H9 136 aa4.62□□□□□ -1.67
CBWD3-219ENST00000622817 MIR7-3HGQ8N6C7 128 aa4.62□□□□□ -1.67
CBWD3-219ENST00000622817 LINC00526Q96FQ7 95 aa4.62□□□□□ -1.67
CBWD3-219ENST00000622817 CAMK2N2Q96S95 79 aa4.62□□□□□ -1.67
CBWD3-219ENST00000622817 PLA2G2DQ9UNK4 145 aa4.62□□□□□ -1.67
CBWD3-219ENST00000622817 TRBV30A0A0K0K1B3 111 aa4.62□□□□□ -1.67
CBWD3-219ENST00000622817 A4D1N5 150 aa4.62□□□□□ -1.67
CBWD3-219ENST00000622817 PSCAO43653 123 aa4.62□□□□□ -1.67
CBWD3-219ENST00000622817 NPC2P61916 151 aa4.62□□□□□ -1.67
CBWD3-219ENST00000622817 C10orf25Q5T742 122 aa4.62□□□□□ -1.67
CBWD3-219ENST00000622817 K7ERJ3 54 aa4.61□□□□□ -1.67
CBWD3-219ENST00000622817 TAX1BP3O14907 124 aa4.61□□□□□ -1.67
CBWD3-219ENST00000622817 CFC1BP0CG36 223 aa4.61□□□□□ -1.67
CBWD3-219ENST00000622817 CFC1P0CG37 223 aa4.61□□□□□ -1.67
CBWD3-219ENST00000622817 STARD9Q9P2P6 4700 aa4.61□□□□□ -1.67
CBWD3-219ENST00000622817 SYCNQ0VAF6 134 aa4.6□□□□□ -1.67
CBWD3-219ENST00000622817 C9orf116Q5BN46 136 aaPredicted RBP4.6□□□□□ -1.67
CBWD3-219ENST00000622817 SOSTDC1Q6X4U4 206 aa4.6□□□□□ -1.67
CBWD3-219ENST00000622817 RAB37Q96AX2 223 aa4.6□□□□□ -1.67
CBWD3-219ENST00000622817 C6orf48Q9UBA6 75 aa4.6□□□□□ -1.67
CBWD3-219ENST00000622817 A0A0B4J2C4 111 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms