RNA–Protein interactions for RNA: ENST00000622226.1

PDLIM2-220, Transcript of PDZ and LIM domain 2, humanhuman

Gene PDLIM2, Length 6,559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-220ENST00000622226 IGLV4-60A0A075B6I1 120 aa11.01□□□□□ -0.65
PDLIM2-220ENST00000622226 C1orf64Q8NEQ6 169 aa11□□□□□ -0.65
PDLIM2-220ENST00000622226 VPREB1P12018 145 aa10.99□□□□□ -0.65
PDLIM2-220ENST00000622226 NOTCH2Q04721 2471 aa10.99□□□□□ -0.65
PDLIM2-220ENST00000622226 SMIM29Q86T20 159 aa10.99□□□□□ -0.65
PDLIM2-220ENST00000622226 A0A1B0GU69 56 aa10.98□□□□□ -0.65
PDLIM2-220ENST00000622226 DSCAMO60469 2012 aa10.98□□□□□ -0.65
PDLIM2-220ENST00000622226 MRGPRG-AS1Q2M3A8 158 aa10.98□□□□□ -0.65
PDLIM2-220ENST00000622226 FSTL3O95633 263 aa10.97□□□□□ -0.65
PDLIM2-220ENST00000622226 LIMD2Q9BT23 127 aa10.97□□□□□ -0.65
PDLIM2-220ENST00000622226 CHCHD7Q9BUK0 85 aa10.97□□□□□ -0.65
PDLIM2-220ENST00000622226 SPINT4Q6UDR6 99 aa10.97□□□□□ -0.65
PDLIM2-220ENST00000622226 IGKV2D-30A0A075B6S6 120 aa10.97□□□□□ -0.65
PDLIM2-220ENST00000622226 IGKV2-30P06310 120 aa10.97□□□□□ -0.65
PDLIM2-220ENST00000622226 CEP192Q8TEP8 1941 aa10.96□□□□□ -0.65
PDLIM2-220ENST00000622226 CDSNQ15517 529 aa10.96□□□□□ -0.65
PDLIM2-220ENST00000622226 hDV103S1A0JD37 113 aa10.96□□□□□ -0.65
PDLIM2-220ENST00000622226 BRI3O95415 125 aa10.96□□□□□ -0.66
PDLIM2-220ENST00000622226 IGLV8-61A0A075B6I0 122 aa10.95□□□□□ -0.66
PDLIM2-220ENST00000622226 CNFNQ9BYD5 112 aa10.94□□□□□ -0.66
PDLIM2-220ENST00000622226 EGFEM1PQ0D2K5 195 aa10.94□□□□□ -0.66
PDLIM2-220ENST00000622226 MUC7Q8TAX7 377 aa10.94□□□□□ -0.66
PDLIM2-220ENST00000622226 BDP1A6H8Y1 2624 aa10.94□□□□□ -0.66
PDLIM2-220ENST00000622226 C7orf65Q6ZTY9 151 aa10.93□□□□□ -0.66
PDLIM2-220ENST00000622226 ZNF702PQ9H963 129 aa10.93□□□□□ -0.66
PDLIM2-220ENST00000622226 LINC01556Q5JQF7 62 aa10.93□□□□□ -0.66
PDLIM2-220ENST00000622226 LINC00474Q9P2X8 69 aa10.93□□□□□ -0.66
PDLIM2-220ENST00000622226 MYO18BQ8IUG5 2567 aa10.93□□□□□ -0.66
PDLIM2-220ENST00000622226 HIVEP3Q5T1R4 2406 aa10.92□□□□□ -0.66
PDLIM2-220ENST00000622226 ALPK3Q96L96 1907 aa10.92□□□□□ -0.66
PDLIM2-220ENST00000622226 A0A096LNJ9 63 aa10.91□□□□□ -0.66
PDLIM2-220ENST00000622226 FBXL19-AS1Q494R0 122 aa10.91□□□□□ -0.66
PDLIM2-220ENST00000622226 CUL9Q8IWT3 2517 aa10.91□□□□□ -0.66
PDLIM2-220ENST00000622226 CACNA1AO00555 2505 aa10.9□□□□□ -0.66
PDLIM2-220ENST00000622226 NUPR2A6NF83 97 aa10.9□□□□□ -0.66
PDLIM2-220ENST00000622226 LINC01006Q8NI28 216 aa10.9□□□□□ -0.66
PDLIM2-220ENST00000622226 FSHBP01225 129 aa10.89□□□□□ -0.67
PDLIM2-220ENST00000622226 PRO3102Q9H379 93 aa10.89□□□□□ -0.67
PDLIM2-220ENST00000622226 ATP11AUNQ6ZP68 121 aa10.89□□□□□ -0.67
PDLIM2-220ENST00000622226 ANKHD1Q8IWZ3 2542 aaKnown RBP10.88□□□□□ -0.67
PDLIM2-220ENST00000622226 LINC00337Q8N6G1 96 aa10.88□□□□□ -0.67
PDLIM2-220ENST00000622226 NUP210LQ5VU65 1888 aa10.87□□□□□ -0.67
PDLIM2-220ENST00000622226 PSMG3-AS1Q96PY0 264 aa10.87□□□□□ -0.67
PDLIM2-220ENST00000622226 ACACBO00763 2458 aa10.87□□□□□ -0.67
PDLIM2-220ENST00000622226 Q6ZSN1 163 aa10.87□□□□□ -0.67
PDLIM2-220ENST00000622226 CXCL6P80162 114 aa10.87□□□□□ -0.67
PDLIM2-220ENST00000622226 AMELXQ99217 191 aa10.86□□□□□ -0.67
PDLIM2-220ENST00000622226 EXPH5Q8NEV8 1989 aa10.85□□□□□ -0.67
PDLIM2-220ENST00000622226 COL5A1P20908 1838 aaPredicted RBP10.85□□□□□ -0.67
PDLIM2-220ENST00000622226 C8orf87E5RJ46 101 aa10.84□□□□□ -0.67
PDLIM2-220ENST00000622226 Q6ZTC4 211 aa10.83□□□□□ -0.68
PDLIM2-220ENST00000622226 SPATA3Q8NHX4 192 aa10.83□□□□□ -0.68
PDLIM2-220ENST00000622226 KIAA0087Q14695 138 aa10.82□□□□□ -0.68
PDLIM2-220ENST00000622226 IGLV1-40P01703 118 aa10.82□□□□□ -0.68
PDLIM2-220ENST00000622226 SMCPP49901 116 aaPredicted RBP10.82□□□□□ -0.68
PDLIM2-220ENST00000622226 C2orf48Q96LS8 159 aa10.82□□□□□ -0.68
PDLIM2-220ENST00000622226 ODF3L2Q3SX64 289 aa10.82□□□□□ -0.68
PDLIM2-220ENST00000622226 FHL2Q14192 279 aa10.81□□□□□ -0.68
PDLIM2-220ENST00000622226 IGLV5-52A0A0A0MRZ9 124 aa10.8□□□□□ -0.68
PDLIM2-220ENST00000622226 ABCA2Q9BZC7 2435 aa10.8□□□□□ -0.68
PDLIM2-220ENST00000622226 ACYP2P14621 99 aa10.8□□□□□ -0.68
PDLIM2-220ENST00000622226 Q6ZRU5 148 aa10.79□□□□□ -0.68
PDLIM2-220ENST00000622226 SSBP3-AS1Q7Z2R9 100 aa10.79□□□□□ -0.68
PDLIM2-220ENST00000622226 C6orf48Q9UBA6 75 aa10.79□□□□□ -0.68
PDLIM2-220ENST00000622226 C11orf71Q6IPW1 123 aa10.79□□□□□ -0.68
PDLIM2-220ENST00000622226 KIAA1549LQ6ZVL6 1849 aa10.79□□□□□ -0.68
PDLIM2-220ENST00000622226 Q8N2B8 174 aa10.78□□□□□ -0.68
PDLIM2-220ENST00000622226 SMCR5Q8TEV8 140 aa10.78□□□□□ -0.68
PDLIM2-220ENST00000622226 MDFIQ99750 246 aa10.78□□□□□ -0.68
PDLIM2-220ENST00000622226 ATG2AQ2TAZ0 1938 aa10.77□□□□□ -0.68
PDLIM2-220ENST00000622226 RPS28P62857 69 aaKnown RBP10.76□□□□□ -0.69
PDLIM2-220ENST00000622226 TM2D3Q9BRN9 247 aa10.76□□□□□ -0.69
PDLIM2-220ENST00000622226 AVPP01185 164 aa10.74□□□□□ -0.69
PDLIM2-220ENST00000622226 FAM218AQ96MZ4 157 aa10.74□□□□□ -0.69
PDLIM2-220ENST00000622226 TTC28Q96AY4 2481 aa10.73□□□□□ -0.69
PDLIM2-220ENST00000622226 CCDC168Q8NDH2 2452 aa10.73□□□□□ -0.69
PDLIM2-220ENST00000622226 RAI1Q7Z5J4 1906 aaPredicted RBP10.73□□□□□ -0.69
PDLIM2-220ENST00000622226 C22orf24Q9Y442 160 aa10.73□□□□□ -0.69
PDLIM2-220ENST00000622226 TET2Q6N021 2002 aaPredicted RBP10.72□□□□□ -0.69
PDLIM2-220ENST00000622226 SPACA4Q8TDM5 124 aa10.72□□□□□ -0.69
PDLIM2-220ENST00000622226 A8MUN3 132 aa10.71□□□□□ -0.7
PDLIM2-220ENST00000622226 FAM19A4Q96LR4 140 aa10.7□□□□□ -0.7
PDLIM2-220ENST00000622226 LTBP2Q14767 1821 aa10.7□□□□□ -0.7
PDLIM2-220ENST00000622226 RPL37AP61513 92 aaKnown RBP10.7□□□□□ -0.7
PDLIM2-220ENST00000622226 ZNF462Q96JM2 2506 aa10.69□□□□□ -0.7
PDLIM2-220ENST00000622226 MOBPQ13875 183 aa10.68□□□□□ -0.7
PDLIM2-220ENST00000622226 PRO0461Q9UI25 63 aa10.68□□□□□ -0.7
PDLIM2-220ENST00000622226 C1orf134Q5TEV5 83 aa10.67□□□□□ -0.7
PDLIM2-220ENST00000622226 LYPD5Q6UWN5 251 aa10.67□□□□□ -0.7
PDLIM2-220ENST00000622226 A0A1B0GUV1 79 aa10.66□□□□□ -0.7
PDLIM2-220ENST00000622226 TP53AIP1Q9HCN2 124 aa10.65□□□□□ -0.7
PDLIM2-220ENST00000622226 LINC01561Q8N1V8 128 aa10.64□□□□□ -0.71
PDLIM2-220ENST00000622226 Q6ZQT0 140 aa10.63□□□□□ -0.71
PDLIM2-220ENST00000622226 NHLRC4P0CG21 123 aaPredicted RBP10.62□□□□□ -0.71
PDLIM2-220ENST00000622226 LINC01600Q96MT4 127 aa10.62□□□□□ -0.71
PDLIM2-220ENST00000622226 TRAV22A0A0B4J277 110 aa10.62□□□□□ -0.71
PDLIM2-220ENST00000622226 IGLV1-51P01701 117 aa10.62□□□□□ -0.71
PDLIM2-220ENST00000622226 LINC00167Q96N53 147 aa10.61□□□□□ -0.71
PDLIM2-220ENST00000622226 COX8CQ7Z4L0 72 aa10.6□□□□□ -0.71
PDLIM2-220ENST00000622226 IGLV5-39A0A0G2JS06 123 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms