RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 DEFB131BA0A096LNP1 70 aa9.38□□□□□ -0.91
SIRPA-204ENST00000622179 C6orf99Q4VX62 202 aa9.38□□□□□ -0.91
SIRPA-204ENST00000622179 C9orf116Q5BN46 136 aaPredicted RBP9.38□□□□□ -0.91
SIRPA-204ENST00000622179 RNF183Q96D59 192 aa9.38□□□□□ -0.91
SIRPA-204ENST00000622179 A0A087WZ39 114 aa9.37□□□□□ -0.91
SIRPA-204ENST00000622179 RMI2Q96E14 147 aa9.37□□□□□ -0.91
SIRPA-204ENST00000622179 SS18L2Q9UHA2 77 aa9.37□□□□□ -0.91
SIRPA-204ENST00000622179 PRR3P79522 188 aaKnown RBP9.36□□□□□ -0.91
SIRPA-204ENST00000622179 PRB2P02812 416 aaPredicted RBP9.36□□□□□ -0.91
SIRPA-204ENST00000622179 KPRPQ5T749 579 aaPredicted RBP9.36□□□□□ -0.91
SIRPA-204ENST00000622179 DIRC1Q969H9 104 aa9.36□□□□□ -0.91
SIRPA-204ENST00000622179 RETNQ9HD89 108 aa9.36□□□□□ -0.91
SIRPA-204ENST00000622179 ITPR1Q14643 2758 aa9.36□□□□□ -0.91
SIRPA-204ENST00000622179 F8WEM9 126 aa9.36□□□□□ -0.91
SIRPA-204ENST00000622179 TMEM256-PLSCR3K7ERE1 68 aa9.36□□□□□ -0.91
SIRPA-204ENST00000622179 JMJD7-PLA2G4BH0Y9G9 81 aa9.35□□□□□ -0.91
SIRPA-204ENST00000622179 LELP1Q5T871 98 aa9.35□□□□□ -0.91
SIRPA-204ENST00000622179 RELNP78509 3460 aa9.35□□□□□ -0.91
SIRPA-204ENST00000622179 LINC00643Q86TS7 51 aa9.34□□□□□ -0.91
SIRPA-204ENST00000622179 SMCPP49901 116 aaPredicted RBP9.34□□□□□ -0.91
SIRPA-204ENST00000622179 RBM3P98179 157 aaKnown RBP9.34□□□□□ -0.91
SIRPA-204ENST00000622179 UNQ6190/PRO20217Q6UXQ8 127 aa9.34□□□□□ -0.91
SIRPA-204ENST00000622179 Q8IZM0 81 aa9.34□□□□□ -0.91
SIRPA-204ENST00000622179 NDUFV3P56181 108 aaKnown RBP9.33□□□□□ -0.92
SIRPA-204ENST00000622179 hADV29S1A0JD25 119 aa9.33□□□□□ -0.92
SIRPA-204ENST00000622179 IGLV5-39A0A0G2JS06 123 aa9.32□□□□□ -0.92
SIRPA-204ENST00000622179 ETDCA0A1B0GVM5 59 aa9.32□□□□□ -0.92
SIRPA-204ENST00000622179 SDIM1Q6ZPB5 146 aa9.32□□□□□ -0.92
SIRPA-204ENST00000622179 CYSRT1A8MQ03 144 aa9.32□□□□□ -0.92
SIRPA-204ENST00000622179 UBE2BP63146 152 aa9.32□□□□□ -0.92
SIRPA-204ENST00000622179 PRO0461Q9UI25 63 aa9.31□□□□□ -0.92
SIRPA-204ENST00000622179 A0A1B0GX51 115 aa9.31□□□□□ -0.92
SIRPA-204ENST00000622179 COX7BP24311 80 aa9.3□□□□□ -0.92
SIRPA-204ENST00000622179 NANOS2P60321 138 aaKnown RBP9.3□□□□□ -0.92
SIRPA-204ENST00000622179 IGHV3OR16-9A0A0B4J2B5 98 aa9.29□□□□□ -0.92
SIRPA-204ENST00000622179 SHISA2Q6UWI4 295 aa9.29□□□□□ -0.92
SIRPA-204ENST00000622179 LINC00337Q8N6G1 96 aa9.28□□□□□ -0.92
SIRPA-204ENST00000622179 A0A087WYN8 130 aa9.28□□□□□ -0.92
SIRPA-204ENST00000622179 C6orf223Q8N319 242 aa9.28□□□□□ -0.92
SIRPA-204ENST00000622179 CELA1Q9UNI1 258 aa9.28□□□□□ -0.92
SIRPA-204ENST00000622179 A0A0J9YWU9 116 aa9.28□□□□□ -0.92
SIRPA-204ENST00000622179 RPL28P46779 137 aaKnown RBP9.28□□□□□ -0.92
SIRPA-204ENST00000622179 SOSTDC1Q6X4U4 206 aa9.27□□□□□ -0.92
SIRPA-204ENST00000622179 IGLV5-45A0A087WSX0 123 aa9.27□□□□□ -0.93
SIRPA-204ENST00000622179 A0A1B0GUV1 79 aa9.27□□□□□ -0.93
SIRPA-204ENST00000622179 Q6ZTC4 211 aa9.27□□□□□ -0.93
SIRPA-204ENST00000622179 MGAM2Q2M2H8 2515 aa9.27□□□□□ -0.93
SIRPA-204ENST00000622179 A8MTW9 85 aa9.26□□□□□ -0.93
SIRPA-204ENST00000622179 Q6ZQY7 126 aa9.26□□□□□ -0.93
SIRPA-204ENST00000622179 ZANQ9Y493 2812 aa9.26□□□□□ -0.93
SIRPA-204ENST00000622179 ASH1LQ9NR48 2969 aaKnown RBP9.26□□□□□ -0.93
SIRPA-204ENST00000622179 IGKV2-24A0A0C4DH68 120 aa9.26□□□□□ -0.93
SIRPA-204ENST00000622179 MAST4O15021 2626 aa9.25□□□□□ -0.93
SIRPA-204ENST00000622179 CDIP1Q9H305 208 aa9.25□□□□□ -0.93
SIRPA-204ENST00000622179 X6R8D5 127 aa9.25□□□□□ -0.93
SIRPA-204ENST00000622179 SYCNQ0VAF6 134 aa9.25□□□□□ -0.93
SIRPA-204ENST00000622179 GCN1Q92616 2671 aaKnown RBP9.25□□□□□ -0.93
SIRPA-204ENST00000622179 ATOX1O00244 68 aa9.24□□□□□ -0.93
SIRPA-204ENST00000622179 COX17Q14061 63 aa9.24□□□□□ -0.93
SIRPA-204ENST00000622179 KRTAP1-3Q8IUG1 177 aa9.24□□□□□ -0.93
SIRPA-204ENST00000622179 Q8N3U1 123 aa9.24□□□□□ -0.93
SIRPA-204ENST00000622179 EIF4EBP3O60516 100 aaPredicted RBP9.24□□□□□ -0.93
SIRPA-204ENST00000622179 LITAFQ99732 161 aa9.24□□□□□ -0.93
SIRPA-204ENST00000622179 IGKV2-28A0A075B6P5 120 aa9.24□□□□□ -0.93
SIRPA-204ENST00000622179 IGKV2D-28P01615 120 aa9.24□□□□□ -0.93
SIRPA-204ENST00000622179 HRNRQ86YZ3 2850 aaPredicted RBP9.23□□□□□ -0.93
SIRPA-204ENST00000622179 TRAV23DV6A0A075B6W5 121 aa9.23□□□□□ -0.93
SIRPA-204ENST00000622179 TEP1Q99973 2627 aaKnown RBP9.23□□□□□ -0.93
SIRPA-204ENST00000622179 NBEAL2Q6ZNJ1 2754 aa9.22□□□□□ -0.93
SIRPA-204ENST00000622179 WFDC10BQ8IUB3 73 aa9.22□□□□□ -0.93
SIRPA-204ENST00000622179 GIG44P09565 113 aaPredicted RBP9.22□□□□□ -0.93
SIRPA-204ENST00000622179 CITED1Q99966 193 aa9.22□□□□□ -0.93
SIRPA-204ENST00000622179 NREPQ16612 68 aa9.22□□□□□ -0.93
SIRPA-204ENST00000622179 FUSP35637 526 aaKnown RBP eCLIP9.21□□□□□ -0.93
SIRPA-204ENST00000622179 SMIM20Q8N5G0 67 aa9.21□□□□□ -0.93
SIRPA-204ENST00000622179 UTP20O75691 2785 aaKnown RBP9.21□□□□□ -0.93
SIRPA-204ENST00000622179 UNC79Q9P2D8 2635 aa9.21□□□□□ -0.94
SIRPA-204ENST00000622179 LYPD5Q6UWN5 251 aa9.21□□□□□ -0.94
SIRPA-204ENST00000622179 SCXQ7RTU7 201 aa9.2□□□□□ -0.94
SIRPA-204ENST00000622179 CRYBG3Q68DQ2 2970 aa9.2□□□□□ -0.94
SIRPA-204ENST00000622179 SBSPONQ8IVN8 264 aa9.2□□□□□ -0.94
SIRPA-204ENST00000622179 CSNK1G2-AS1Q8NCQ2 148 aa9.2□□□□□ -0.94
SIRPA-204ENST00000622179 ENHOQ6UWT2 76 aa9.19□□□□□ -0.94
SIRPA-204ENST00000622179 TRAV10A0A0B4J240 114 aa9.19□□□□□ -0.94
SIRPA-204ENST00000622179 TRBV10-3A0A0K0K1G6 114 aa9.19□□□□□ -0.94
SIRPA-204ENST00000622179 Q8N814 137 aa9.18□□□□□ -0.94
SIRPA-204ENST00000622179 FAM19A5Q7Z5A7 132 aaPredicted RBP9.18□□□□□ -0.94
SIRPA-204ENST00000622179 FAM240AA0A1B0GVK7 77 aa9.18□□□□□ -0.94
SIRPA-204ENST00000622179 ZNF73O43830 326 aaPredicted RBP9.18□□□□□ -0.94
SIRPA-204ENST00000622179 FAM218AQ96MZ4 157 aa9.18□□□□□ -0.94
SIRPA-204ENST00000622179 C19orf73Q9NVV2 129 aa9.18□□□□□ -0.94
SIRPA-204ENST00000622179 CCDC179H3BU77 68 aa9.17□□□□□ -0.94
SIRPA-204ENST00000622179 UPK3BQ9BT76 320 aa9.17□□□□□ -0.94
SIRPA-204ENST00000622179 SETXQ7Z333 2677 aaKnown RBP9.17□□□□□ -0.94
SIRPA-204ENST00000622179 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.17□□□□□ -0.94
SIRPA-204ENST00000622179 H3BQ85 93 aa9.17□□□□□ -0.94
SIRPA-204ENST00000622179 RPL37AP8A6NKH3 93 aa9.17□□□□□ -0.94
SIRPA-204ENST00000622179 WFDC9Q8NEX5 89 aa9.16□□□□□ -0.94
SIRPA-204ENST00000622179 PDE6GP18545 87 aa9.16□□□□□ -0.94
SIRPA-204ENST00000622179 UBR5O95071 2799 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms