RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 SPAG11BQ08648 103 aa5.01□□□□□ -1.61
NEDD9-216ENST00000620854 FAM218AQ96MZ4 157 aa5.01□□□□□ -1.61
NEDD9-216ENST00000620854 RPL18AQ02543 176 aaKnown RBP5.01□□□□□ -1.61
NEDD9-216ENST00000620854 C1orf43Q9BWL3 253 aa5.01□□□□□ -1.61
NEDD9-216ENST00000620854 PYGO1Q9Y3Y4 419 aa5.01□□□□□ -1.61
NEDD9-216ENST00000620854 SETXQ7Z333 2677 aaKnown RBP5□□□□□ -1.61
NEDD9-216ENST00000620854 LINC00643Q86TS7 51 aa5□□□□□ -1.61
NEDD9-216ENST00000620854 M0QXV9 152 aa5□□□□□ -1.61
NEDD9-216ENST00000620854 TIRAPP58753 221 aa5□□□□□ -1.61
NEDD9-216ENST00000620854 LINC00242Q5T6M2 205 aa5□□□□□ -1.61
NEDD9-216ENST00000620854 FAM110AQ9BQ89 295 aa5□□□□□ -1.61
NEDD9-216ENST00000620854 IGSF10Q6WRI0 2623 aa5□□□□□ -1.61
NEDD9-216ENST00000620854 TRBV10-1A0A0K0K1A3 114 aa4.99□□□□□ -1.61
NEDD9-216ENST00000620854 UBE2BP63146 152 aa4.99□□□□□ -1.61
NEDD9-216ENST00000620854 LINC00269Q8N2A0 174 aa4.99□□□□□ -1.61
NEDD9-216ENST00000620854 WFDC10AQ9H1F0 79 aa4.99□□□□□ -1.61
NEDD9-216ENST00000620854 AKAP9Q99996 3911 aa4.99□□□□□ -1.61
NEDD9-216ENST00000620854 FLNAP21333 2647 aaKnown RBP4.99□□□□□ -1.61
NEDD9-216ENST00000620854 LINC00526Q96FQ7 95 aa4.99□□□□□ -1.61
NEDD9-216ENST00000620854 BRI3O95415 125 aa4.99□□□□□ -1.61
NEDD9-216ENST00000620854 DEFB114Q30KQ6 69 aa4.99□□□□□ -1.61
NEDD9-216ENST00000620854 SCXQ7RTU7 201 aa4.99□□□□□ -1.61
NEDD9-216ENST00000620854 C20orf197Q8N268 126 aa4.99□□□□□ -1.61
NEDD9-216ENST00000620854 ATRQ13535 2644 aa4.98□□□□□ -1.61
NEDD9-216ENST00000620854 CDK2AP2O75956 126 aa4.98□□□□□ -1.61
NEDD9-216ENST00000620854 SPART-AS1P0CW21 52 aa4.98□□□□□ -1.61
NEDD9-216ENST00000620854 A0A087WVE0 104 aa4.98□□□□□ -1.61
NEDD9-216ENST00000620854 LOC100131303A0A0U1RQF7 123 aa4.98□□□□□ -1.61
NEDD9-216ENST00000620854 NDUFA1O15239 70 aa4.98□□□□□ -1.61
NEDD9-216ENST00000620854 HIGD2BQ4VC39 106 aa4.98□□□□□ -1.61
NEDD9-216ENST00000620854 C9orf129Q5T035 196 aaKnown RBP4.98□□□□□ -1.61
NEDD9-216ENST00000620854 XAGE1AQ9HD64 81 aa4.98□□□□□ -1.61
NEDD9-216ENST00000620854 ITPR3Q14573 2671 aa4.98□□□□□ -1.61
NEDD9-216ENST00000620854 PRO0255Q9UI72 69 aa4.98□□□□□ -1.61
NEDD9-216ENST00000620854 ETDCA0A1B0GVM5 59 aa4.97□□□□□ -1.61
NEDD9-216ENST00000620854 NREPQ16612 68 aa4.97□□□□□ -1.61
NEDD9-216ENST00000620854 JMJD7-PLA2G4BH0Y9G9 81 aa4.97□□□□□ -1.61
NEDD9-216ENST00000620854 FAM240AA0A1B0GVK7 77 aa4.97□□□□□ -1.61
NEDD9-216ENST00000620854 SMIM1B2RUZ4 78 aa4.97□□□□□ -1.61
NEDD9-216ENST00000620854 FAM222AQ5U5X8 452 aa4.97□□□□□ -1.61
NEDD9-216ENST00000620854 TRBV7-7A0A0K0K1E9 115 aa4.97□□□□□ -1.61
NEDD9-216ENST00000620854 J3KT08 172 aa4.97□□□□□ -1.61
NEDD9-216ENST00000620854 LINC00482Q8N8I6 264 aa4.97□□□□□ -1.61
NEDD9-216ENST00000620854 FUSP35637 526 aaKnown RBP eCLIP4.96□□□□□ -1.621e-8■■■□□ 15.2
NEDD9-216ENST00000620854 C3orf22Q8N5N4 141 aa4.96□□□□□ -1.62
NEDD9-216ENST00000620854 NBPF19A0A087WUL8 3843 aa4.96□□□□□ -1.62
NEDD9-216ENST00000620854 A0A087WYN8 130 aa4.96□□□□□ -1.62
NEDD9-216ENST00000620854 C6orf99Q4VX62 202 aa4.96□□□□□ -1.62
NEDD9-216ENST00000620854 TMEM256-PLSCR3K7ERE1 68 aa4.95□□□□□ -1.62
NEDD9-216ENST00000620854 LINC00337Q8N6G1 96 aa4.95□□□□□ -1.62
NEDD9-216ENST00000620854 DIRC1Q969H9 104 aa4.95□□□□□ -1.62
NEDD9-216ENST00000620854 ENHOQ6UWT2 76 aa4.95□□□□□ -1.62
NEDD9-216ENST00000620854 NTM-AS1Q6ZSK4 140 aa4.95□□□□□ -1.62
NEDD9-216ENST00000620854 WFDC9Q8NEX5 89 aa4.95□□□□□ -1.62
NEDD9-216ENST00000620854 REG3AQ06141 175 aa4.95□□□□□ -1.62
NEDD9-216ENST00000620854 CYSTM1Q9H1C7 97 aa4.95□□□□□ -1.62
NEDD9-216ENST00000620854 MGAM2Q2M2H8 2515 aa4.95□□□□□ -1.62
NEDD9-216ENST00000620854 C5orf47Q569G3 176 aa4.94□□□□□ -1.62
NEDD9-216ENST00000620854 CHCHD10Q8WYQ3 142 aaPredicted RBP4.94□□□□□ -1.62
NEDD9-216ENST00000620854 UQCRQO14949 82 aa4.94□□□□□ -1.62
NEDD9-216ENST00000620854 UPK3BQ9BT76 320 aa4.94□□□□□ -1.62
NEDD9-216ENST00000620854 TRBV6-8A0A0A6YYG3 113 aa4.94□□□□□ -1.62
NEDD9-216ENST00000620854 TIMM17BO60830 172 aa4.94□□□□□ -1.62
NEDD9-216ENST00000620854 SMIM11BQ8TCY0 68 aa4.94□□□□□ -1.62
NEDD9-216ENST00000620854 PRR3P79522 188 aaKnown RBP4.93□□□□□ -1.62
NEDD9-216ENST00000620854 C11orf72Q8NBR9 251 aa4.93□□□□□ -1.62
NEDD9-216ENST00000620854 C22orf24Q9Y442 160 aa4.93□□□□□ -1.62
NEDD9-216ENST00000620854 MAST4O15021 2626 aa4.93□□□□□ -1.62
NEDD9-216ENST00000620854 TMEM258P61165 79 aa4.93□□□□□ -1.62
NEDD9-216ENST00000620854 LINC00846Q9NV44 126 aa4.93□□□□□ -1.62
NEDD9-216ENST00000620854 ZNF469Q96JG9 3925 aaPredicted RBP4.93□□□□□ -1.62
NEDD9-216ENST00000620854 A0A096LNI7 61 aa4.93□□□□□ -1.62
NEDD9-216ENST00000620854 IGLV5-39A0A0G2JS06 123 aa4.93□□□□□ -1.62
NEDD9-216ENST00000620854 NDUFS5O43920 106 aa4.93□□□□□ -1.62
NEDD9-216ENST00000620854 KIR2DL5BQ8NHK3 375 aa4.93□□□□□ -1.62
NEDD9-216ENST00000620854 CXCL5P42830 114 aa4.92□□□□□ -1.62
NEDD9-216ENST00000620854 CDC42SE2Q9NRR3 84 aa4.92□□□□□ -1.62
NEDD9-216ENST00000620854 IBA57-AS1B1ANH7 110 aa4.92□□□□□ -1.62
NEDD9-216ENST00000620854 IGKV2-28A0A075B6P5 120 aa4.92□□□□□ -1.62
NEDD9-216ENST00000620854 IGKV2-24A0A0C4DH68 120 aa4.92□□□□□ -1.62
NEDD9-216ENST00000620854 IGKV2D-28P01615 120 aa4.92□□□□□ -1.62
NEDD9-216ENST00000620854 COX7BP24311 80 aa4.92□□□□□ -1.62
NEDD9-216ENST00000620854 BEAN1Q3B7T3 259 aa4.92□□□□□ -1.62
NEDD9-216ENST00000620854 FAM19A5Q7Z5A7 132 aaPredicted RBP4.92□□□□□ -1.62
NEDD9-216ENST00000620854 LINC01600Q96MT4 127 aa4.92□□□□□ -1.62
NEDD9-216ENST00000620854 IMUPQ9GZP8 106 aa4.92□□□□□ -1.62
NEDD9-216ENST00000620854 COX7CP15954 63 aa4.92□□□□□ -1.62
NEDD9-216ENST00000620854 IGLV5-45A0A087WSX0 123 aa4.91□□□□□ -1.62
NEDD9-216ENST00000620854 USP17L23D6RBM5 183 aa4.91□□□□□ -1.62
NEDD9-216ENST00000620854 Q6ZQY7 126 aa4.91□□□□□ -1.62
NEDD9-216ENST00000620854 C16orf95Q9H693 158 aa4.91□□□□□ -1.62
NEDD9-216ENST00000620854 IGLV4-60A0A075B6I1 120 aa4.91□□□□□ -1.62
NEDD9-216ENST00000620854 CCL18P55774 89 aa4.91□□□□□ -1.62
NEDD9-216ENST00000620854 C1orf158Q8N1D5 194 aa4.91□□□□□ -1.62
NEDD9-216ENST00000620854 RMI2Q96E14 147 aa4.91□□□□□ -1.62
NEDD9-216ENST00000620854 ODF3L2Q3SX64 289 aa4.9□□□□□ -1.63
NEDD9-216ENST00000620854 MPLKIPQ8TAP9 179 aa4.9□□□□□ -1.63
NEDD9-216ENST00000620854 HIGD2AQ9BW72 106 aa4.9□□□□□ -1.63
NEDD9-216ENST00000620854 TRBV6-4A0A1B0GX49 114 aa4.9□□□□□ -1.63
NEDD9-216ENST00000620854 C3orf84H3BNL1 204 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms