RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 SCGB3A1Q96QR1 104 aa4.13□□□□□ -1.75
BRCC3-209ENST00000620502 C2orf88Q9BSF0 95 aa4.13□□□□□ -1.75
BRCC3-209ENST00000620502 A0A087WYN8 130 aa4.12□□□□□ -1.75
BRCC3-209ENST00000620502 A0A096LNI7 61 aa4.12□□□□□ -1.75
BRCC3-209ENST00000620502 LINC01549A6NIU2 74 aa4.12□□□□□ -1.75
BRCC3-209ENST00000620502 INAFM2P0DMQ5 153 aa4.12□□□□□ -1.75
BRCC3-209ENST00000620502 SPAG11BQ08648 103 aa4.12□□□□□ -1.75
BRCC3-209ENST00000620502 PAPPA-AS1Q5QFB9 102 aa4.12□□□□□ -1.75
BRCC3-209ENST00000620502 LINC01561Q8N1V8 128 aa4.12□□□□□ -1.75
BRCC3-209ENST00000620502 ORAOV1Q8WV07 137 aa4.12□□□□□ -1.75
BRCC3-209ENST00000620502 CARD19Q96LW7 228 aa4.12□□□□□ -1.75
BRCC3-209ENST00000620502 CAMK2N2Q96S95 79 aa4.12□□□□□ -1.75
BRCC3-209ENST00000620502 CST9LQ9H4G1 147 aa4.12□□□□□ -1.75
BRCC3-209ENST00000620502 A0A0J9YXV3 536 aa4.11□□□□□ -1.75
BRCC3-209ENST00000620502 COLCA2A8K830 154 aa4.11□□□□□ -1.75
BRCC3-209ENST00000620502 F8WDY8 70 aa4.11□□□□□ -1.75
BRCC3-209ENST00000620502 PMCHL1Q16048 86 aa4.11□□□□□ -1.75
BRCC3-209ENST00000620502 PDZD11Q5EBL8 140 aa4.11□□□□□ -1.75
BRCC3-209ENST00000620502 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
BRCC3-209ENST00000620502 DPH3Q96FX2 82 aa4.11□□□□□ -1.75
BRCC3-209ENST00000620502 PLAC8Q9NZF1 115 aa4.11□□□□□ -1.75
BRCC3-209ENST00000620502 CDKN2A-AS1Q9UH64 79 aa4.11□□□□□ -1.75
BRCC3-209ENST00000620502 IGLV5-45A0A087WSX0 123 aa4.1□□□□□ -1.75
BRCC3-209ENST00000620502 IGKV2-24A0A0C4DH68 120 aa4.1□□□□□ -1.75
BRCC3-209ENST00000620502 LOC107984640A0A0U1RRK4 108 aa4.1□□□□□ -1.75
BRCC3-209ENST00000620502 TINCRA0A1B0GVN0 87 aa4.1□□□□□ -1.75
BRCC3-209ENST00000620502 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.1□□□□□ -1.75
BRCC3-209ENST00000620502 TRGC2P03986 189 aa4.1□□□□□ -1.75
BRCC3-209ENST00000620502 RAB5BP61020 215 aa4.1□□□□□ -1.75
BRCC3-209ENST00000620502 HERVK_113P63121 156 aa4.1□□□□□ -1.75
BRCC3-209ENST00000620502 SEC11AP67812 179 aa4.1□□□□□ -1.75
BRCC3-209ENST00000620502 PMVKQ15126 192 aa4.1□□□□□ -1.75
BRCC3-209ENST00000620502 MAJINQ3KP22 176 aa4.1□□□□□ -1.75
BRCC3-209ENST00000620502 UNQ6190/PRO20217Q6UXQ8 127 aa4.1□□□□□ -1.75
BRCC3-209ENST00000620502 STPG4Q8N801 248 aa4.1□□□□□ -1.75
BRCC3-209ENST00000620502 MPLKIPQ8TAP9 179 aa4.1□□□□□ -1.75
BRCC3-209ENST00000620502 MRPL35Q9NZE8 188 aaKnown RBP4.1□□□□□ -1.75
BRCC3-209ENST00000620502 C6orf48Q9UBA6 75 aa4.1□□□□□ -1.75
BRCC3-209ENST00000620502 FAT1Q14517 4588 aa4.09□□□□□ -1.75
BRCC3-209ENST00000620502 NDUFA1O15239 70 aa4.09□□□□□ -1.75
BRCC3-209ENST00000620502 HBDP02042 147 aa4.09□□□□□ -1.75
BRCC3-209ENST00000620502 C2orf82Q6UX34 121 aa4.09□□□□□ -1.75
BRCC3-209ENST00000620502 CHCHD1Q96BP2 118 aaKnown RBP4.09□□□□□ -1.75
BRCC3-209ENST00000620502 GEMIN7Q9H840 131 aaKnown RBP4.09□□□□□ -1.75
BRCC3-209ENST00000620502 LINC00474Q9P2X8 69 aa4.09□□□□□ -1.75
BRCC3-209ENST00000620502 PKIGQ9Y2B9 76 aa4.09□□□□□ -1.75
BRCC3-209ENST00000620502 SMIM1B2RUZ4 78 aa4.08□□□□□ -1.76
BRCC3-209ENST00000620502 SCO1O75880 301 aa4.08□□□□□ -1.76
BRCC3-209ENST00000620502 TLX1NBP0CAT3 122 aa4.08□□□□□ -1.76
BRCC3-209ENST00000620502 IGLC3P0DOY3 106 aa4.08□□□□□ -1.76
BRCC3-209ENST00000620502 RPL37AP61513 92 aaKnown RBP4.08□□□□□ -1.76
BRCC3-209ENST00000620502 GAGE2BQ13066 116 aa4.08□□□□□ -1.76
BRCC3-209ENST00000620502 Q6ZRP5 223 aa4.08□□□□□ -1.76
BRCC3-209ENST00000620502 Q8IZM0 81 aa4.08□□□□□ -1.76
BRCC3-209ENST00000620502 TRBV30A0A0K0K1B3 111 aa4.07□□□□□ -1.76
BRCC3-209ENST00000620502 A0A1W2PNN7 141 aa4.07□□□□□ -1.76
BRCC3-209ENST00000620502 ATP5LO75964 103 aa4.07□□□□□ -1.76
BRCC3-209ENST00000620502 HNRNPA3P51991 378 aaKnown RBP4.07□□□□□ -1.76
BRCC3-209ENST00000620502 C6orf226Q5I0X4 101 aa4.07□□□□□ -1.76
BRCC3-209ENST00000620502 FAM19A2Q8N3H0 131 aa4.07□□□□□ -1.76
BRCC3-209ENST00000620502 LINC00469Q8N7U9 141 aa4.07□□□□□ -1.76
BRCC3-209ENST00000620502 TOMM7Q9P0U1 55 aa4.07□□□□□ -1.76
BRCC3-209ENST00000620502 NUPR1O60356 82 aa4.06□□□□□ -1.76
BRCC3-209ENST00000620502 PRSS2P07478 247 aa4.06□□□□□ -1.76
BRCC3-209ENST00000620502 SPINK8P0C7L1 97 aa4.06□□□□□ -1.76
BRCC3-209ENST00000620502 NDUFA6P56556 154 aa4.06□□□□□ -1.76
BRCC3-209ENST00000620502 CKS1BP61024 79 aa4.06□□□□□ -1.76
BRCC3-209ENST00000620502 RPL18AQ02543 176 aaKnown RBP4.06□□□□□ -1.76
BRCC3-209ENST00000620502 C9orf116Q5BN46 136 aaPredicted RBP4.06□□□□□ -1.76
BRCC3-209ENST00000620502 BAGE3Q86Y29 109 aa4.06□□□□□ -1.76
BRCC3-209ENST00000620502 KRTAP7-1Q8IUC3 87 aa4.06□□□□□ -1.76
BRCC3-209ENST00000620502 PACRGQ96M98 296 aaPredicted RBP4.06□□□□□ -1.76
BRCC3-209ENST00000620502 VPS13BQ7Z7G8 4022 aa4.05□□□□□ -1.76
BRCC3-209ENST00000620502 TRAV12-1A0A0B4J245 112 aa4.05□□□□□ -1.76
BRCC3-209ENST00000620502 IGLV5-39A0A0G2JS06 123 aa4.05□□□□□ -1.76
BRCC3-209ENST00000620502 FAM168BA1KXE4 195 aa4.05□□□□□ -1.76
BRCC3-209ENST00000620502 C11orf86A6NJI1 115 aa4.05□□□□□ -1.76
BRCC3-209ENST00000620502 NDUFC2-KCTD14E9PQ53 114 aa4.05□□□□□ -1.76
BRCC3-209ENST00000620502 F8VRH5 84 aa4.05□□□□□ -1.76
BRCC3-209ENST00000620502 HSBP1O75506 76 aa4.05□□□□□ -1.76
BRCC3-209ENST00000620502 SERF1AO75920 110 aa4.05□□□□□ -1.76
BRCC3-209ENST00000620502 ZNF22P17026 224 aaPredicted RBP4.05□□□□□ -1.76
BRCC3-209ENST00000620502 GAGE2EQ4V326 116 aa4.05□□□□□ -1.76
BRCC3-209ENST00000620502 COX7B2Q8TF08 81 aa4.05□□□□□ -1.76
BRCC3-209ENST00000620502 C7orf33Q8WU49 177 aa4.05□□□□□ -1.76
BRCC3-209ENST00000620502 IFI27L1Q96BM0 104 aa4.05□□□□□ -1.76
BRCC3-209ENST00000620502 GAGE2DQ9UEU5 116 aa4.05□□□□□ -1.76
BRCC3-209ENST00000620502 H3BRM9 83 aa4.04□□□□□ -1.76
BRCC3-209ENST00000620502 C9orf129Q5T035 196 aaKnown RBP4.04□□□□□ -1.76
BRCC3-209ENST00000620502 CHTOPQ9Y3Y2 248 aaKnown RBP4.04□□□□□ -1.76
BRCC3-209ENST00000620502 KRTAP29-1A8MX34 341 aaPredicted RBP4.03□□□□□ -1.76
BRCC3-209ENST00000620502 HIST1H2BKO60814 126 aa4.03□□□□□ -1.76
BRCC3-209ENST00000620502 HIST1H2BJP06899 126 aa4.03□□□□□ -1.76
BRCC3-209ENST00000620502 HIST1H2BOP23527 126 aa4.03□□□□□ -1.76
BRCC3-209ENST00000620502 HIST1H2BBP33778 126 aa4.03□□□□□ -1.76
BRCC3-209ENST00000620502 CXCL5P42830 114 aa4.03□□□□□ -1.76
BRCC3-209ENST00000620502 HIST1H2BDP58876 126 aa4.03□□□□□ -1.76
BRCC3-209ENST00000620502 HIST1H2BCP62807 126 aa4.03□□□□□ -1.76
BRCC3-209ENST00000620502 PRR3P79522 188 aaKnown RBP4.03□□□□□ -1.76
BRCC3-209ENST00000620502 HIST2H2BEQ16778 126 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms