RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 RAB5BP61020 215 aa5.2□□□□□ -1.58
NEK3-209ENST00000618856 C10orf25Q5T742 122 aa5.2□□□□□ -1.58
NEK3-209ENST00000618856 CDKN2A-AS1Q9UH64 79 aa5.2□□□□□ -1.58
NEK3-209ENST00000618856 A0A0J9YXV3 536 aa5.19□□□□□ -1.58
NEK3-209ENST00000618856 LOC107984640A0A0U1RRK4 108 aa5.19□□□□□ -1.58
NEK3-209ENST00000618856 HBDP02042 147 aa5.19□□□□□ -1.58
NEK3-209ENST00000618856 PMVKQ15126 192 aa5.19□□□□□ -1.58
NEK3-209ENST00000618856 Q8IZM0 81 aa5.19□□□□□ -1.58
NEK3-209ENST00000618856 CHCHD1Q96BP2 118 aaKnown RBP5.19□□□□□ -1.58
NEK3-209ENST00000618856 C6orf48Q9UBA6 75 aa5.19□□□□□ -1.58
NEK3-209ENST00000618856 TNXBP22105 4242 aa5.18□□□□□ -1.58
NEK3-209ENST00000618856 TRBV30A0A0K0K1B3 111 aa5.18□□□□□ -1.58
NEK3-209ENST00000618856 NDUFA1O15239 70 aa5.18□□□□□ -1.58
NEK3-209ENST00000618856 TRGC2P03986 189 aa5.18□□□□□ -1.58
NEK3-209ENST00000618856 IGLC3P0DOY3 106 aa5.18□□□□□ -1.58
NEK3-209ENST00000618856 LINC00310P59036 64 aa5.18□□□□□ -1.58
NEK3-209ENST00000618856 ANKRD39Q53RE8 183 aa5.18□□□□□ -1.58
NEK3-209ENST00000618856 UNQ6190/PRO20217Q6UXQ8 127 aa5.18□□□□□ -1.58
NEK3-209ENST00000618856 IGKV2-24A0A0C4DH68 120 aa5.17□□□□□ -1.58
NEK3-209ENST00000618856 SMIM1B2RUZ4 78 aa5.17□□□□□ -1.58
NEK3-209ENST00000618856 PMCHL1Q16048 86 aa5.17□□□□□ -1.58
NEK3-209ENST00000618856 MAJINQ3KP22 176 aa5.17□□□□□ -1.58
NEK3-209ENST00000618856 STPG4Q8N801 248 aa5.17□□□□□ -1.58
NEK3-209ENST00000618856 IGLV5-39A0A0G2JS06 123 aa5.16□□□□□ -1.58
NEK3-209ENST00000618856 A0A1W2PNN7 141 aa5.16□□□□□ -1.58
NEK3-209ENST00000618856 ATP5LO75964 103 aa5.16□□□□□ -1.58
NEK3-209ENST00000618856 RPL37AP61513 92 aaKnown RBP5.16□□□□□ -1.58
NEK3-209ENST00000618856 ODF1Q14990 250 aa5.16□□□□□ -1.58
NEK3-209ENST00000618856 C2orf82Q6UX34 121 aa5.16□□□□□ -1.58
NEK3-209ENST00000618856 Q6ZRP5 223 aa5.16□□□□□ -1.58
NEK3-209ENST00000618856 GEMIN7Q9H840 131 aaKnown RBP5.16□□□□□ -1.58
NEK3-209ENST00000618856 FLG2Q5D862 2391 aaPredicted RBP5.16□□□□□ -1.58
NEK3-209ENST00000618856 HMCN2Q8NDA2 5059 aa5.15□□□□□ -1.58
NEK3-209ENST00000618856 TRAV12-1A0A0B4J245 112 aa5.15□□□□□ -1.59
NEK3-209ENST00000618856 NDUFC2-KCTD14E9PQ53 114 aa5.15□□□□□ -1.59
NEK3-209ENST00000618856 HNRNPA3P51991 378 aaKnown RBP5.15□□□□□ -1.59
NEK3-209ENST00000618856 KRTAP7-1Q8IUC3 87 aa5.15□□□□□ -1.59
NEK3-209ENST00000618856 LINC00469Q8N7U9 141 aa5.15□□□□□ -1.59
NEK3-209ENST00000618856 DMBT1Q9UGM3 2413 aaPredicted RBP5.15□□□□□ -1.59
NEK3-209ENST00000618856 KRTAP29-1A8MX34 341 aaPredicted RBP5.14□□□□□ -1.59
NEK3-209ENST00000618856 F8VRH5 84 aa5.14□□□□□ -1.59
NEK3-209ENST00000618856 ZNF22P17026 224 aaPredicted RBP5.14□□□□□ -1.59
NEK3-209ENST00000618856 CXCL5P42830 114 aa5.14□□□□□ -1.59
NEK3-209ENST00000618856 GAGE2BQ13066 116 aa5.14□□□□□ -1.59
NEK3-209ENST00000618856 C9orf116Q5BN46 136 aaPredicted RBP5.14□□□□□ -1.59
NEK3-209ENST00000618856 C6orf226Q5I0X4 101 aa5.14□□□□□ -1.59
NEK3-209ENST00000618856 DPH3Q96FX2 82 aa5.14□□□□□ -1.59
NEK3-209ENST00000618856 PACRGQ96M98 296 aaPredicted RBP5.14□□□□□ -1.59
NEK3-209ENST00000618856 KRTAP4-12Q9BQ66 201 aa5.14□□□□□ -1.59
NEK3-209ENST00000618856 NUPR1O60356 82 aa5.13□□□□□ -1.59
NEK3-209ENST00000618856 PRSS2P07478 247 aa5.13□□□□□ -1.59
NEK3-209ENST00000618856 CKS1BP61024 79 aa5.13□□□□□ -1.59
NEK3-209ENST00000618856 BAGE3Q86Y29 109 aa5.13□□□□□ -1.59
NEK3-209ENST00000618856 COX7B2Q8TF08 81 aa5.13□□□□□ -1.59
NEK3-209ENST00000618856 IFI27L1Q96BM0 104 aa5.13□□□□□ -1.59
NEK3-209ENST00000618856 C11orf86A6NJI1 115 aa5.12□□□□□ -1.59
NEK3-209ENST00000618856 H3BRM9 83 aa5.12□□□□□ -1.59
NEK3-209ENST00000618856 HSBP1O75506 76 aa5.12□□□□□ -1.59
NEK3-209ENST00000618856 SCO1O75880 301 aa5.12□□□□□ -1.59
NEK3-209ENST00000618856 SERF1AO75920 110 aa5.12□□□□□ -1.59
NEK3-209ENST00000618856 SPINK8P0C7L1 97 aa5.12□□□□□ -1.59
NEK3-209ENST00000618856 PRR3P79522 188 aaKnown RBP5.12□□□□□ -1.59
NEK3-209ENST00000618856 RPL18AQ02543 176 aaKnown RBP5.12□□□□□ -1.59
NEK3-209ENST00000618856 C9orf129Q5T035 196 aaKnown RBP5.12□□□□□ -1.59
NEK3-209ENST00000618856 C7orf33Q8WU49 177 aa5.12□□□□□ -1.59
NEK3-209ENST00000618856 TOMM7Q9P0U1 55 aa5.12□□□□□ -1.59
NEK3-209ENST00000618856 FAM168BA1KXE4 195 aa5.11□□□□□ -1.59
NEK3-209ENST00000618856 SRSF9Q13242 221 aaKnown RBP eCLIP5.11□□□□□ -1.59
NEK3-209ENST00000618856 FAM19A2Q8N3H0 131 aa5.11□□□□□ -1.59
NEK3-209ENST00000618856 CHTOPQ9Y3Y2 248 aaKnown RBP5.11□□□□□ -1.59
NEK3-209ENST00000618856 HIST1H2BKO60814 126 aa5.1□□□□□ -1.59
NEK3-209ENST00000618856 OXTP01178 125 aa5.1□□□□□ -1.59
NEK3-209ENST00000618856 HIST1H2BJP06899 126 aa5.1□□□□□ -1.59
NEK3-209ENST00000618856 HIST1H2BOP23527 126 aa5.1□□□□□ -1.59
NEK3-209ENST00000618856 HIST1H2BBP33778 126 aa5.1□□□□□ -1.59
NEK3-209ENST00000618856 NDUFA6P56556 154 aa5.1□□□□□ -1.59
NEK3-209ENST00000618856 HIST1H2BDP58876 126 aa5.1□□□□□ -1.59
NEK3-209ENST00000618856 HIST1H2BCP62807 126 aa5.1□□□□□ -1.59
NEK3-209ENST00000618856 HIST2H2BEQ16778 126 aa5.1□□□□□ -1.59
NEK3-209ENST00000618856 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.1□□□□□ -1.59
NEK3-209ENST00000618856 LCE3BQ5TA77 95 aa5.1□□□□□ -1.59
NEK3-209ENST00000618856 HIST1H2BHQ93079 126 aa5.1□□□□□ -1.59
NEK3-209ENST00000618856 HIST1H2BNQ99877 126 aa5.1□□□□□ -1.59
NEK3-209ENST00000618856 HIST1H2BMQ99879 126 aa5.1□□□□□ -1.59
NEK3-209ENST00000618856 TMEM223A0PJW6 202 aa5.09□□□□□ -1.59
NEK3-209ENST00000618856 LEPROTL1O95214 131 aa5.09□□□□□ -1.59
NEK3-209ENST00000618856 GAGE2EQ4V326 116 aa5.09□□□□□ -1.59
NEK3-209ENST00000618856 COA6Q5JTJ3 125 aaKnown RBP5.09□□□□□ -1.59
NEK3-209ENST00000618856 PHF5AQ7RTV0 110 aaKnown RBP5.09□□□□□ -1.59
NEK3-209ENST00000618856 KRTAP11-1Q8IUC1 163 aa5.09□□□□□ -1.59
NEK3-209ENST00000618856 ZNF625Q96I27 306 aaPredicted RBP5.09□□□□□ -1.59
NEK3-209ENST00000618856 GAGE2DQ9UEU5 116 aa5.09□□□□□ -1.59
NEK3-209ENST00000618856 PLA2G2DQ9UNK4 145 aa5.09□□□□□ -1.59
NEK3-209ENST00000618856 SERTAD4-AS1Q5TG53 156 aa5.08□□□□□ -1.6
NEK3-209ENST00000618856 SFTA2Q6UW10 78 aa5.08□□□□□ -1.6
NEK3-209ENST00000618856 PSORS1C2Q9UIG4 136 aa5.08□□□□□ -1.6
NEK3-209ENST00000618856 IGLV5-37A0A075B6J1 123 aa5.07□□□□□ -1.6
NEK3-209ENST00000618856 COX17Q14061 63 aa5.07□□□□□ -1.6
NEK3-209ENST00000618856 TMEM170BQ5T4T1 132 aa5.07□□□□□ -1.6
NEK3-209ENST00000618856 SPINK6Q6UWN8 80 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms