RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 ZNF138P52744 262 aa5.88□□□□□ -1.47
GPC6-202ENST00000617456 HBBP68871 147 aa5.88□□□□□ -1.47
GPC6-202ENST00000617456 ZNF56Q15929 161 aa5.88□□□□□ -1.47
GPC6-202ENST00000617456 Q5VSD8 79 aa5.88□□□□□ -1.47
GPC6-202ENST00000617456 ZFP2Q6ZN57 461 aa5.88□□□□□ -1.47
GPC6-202ENST00000617456 C11orf72Q8NBR9 251 aa5.88□□□□□ -1.47
GPC6-202ENST00000617456 UBE2WQ96B02 151 aa5.88□□□□□ -1.47
GPC6-202ENST00000617456 FXYD5Q96DB9 178 aa5.88□□□□□ -1.47
GPC6-202ENST00000617456 GFRA4Q9GZZ7 299 aa5.88□□□□□ -1.47
GPC6-202ENST00000617456 VPS13BQ7Z7G8 4022 aa5.88□□□□□ -1.47
GPC6-202ENST00000617456 MYCBP2O75592 4640 aa5.88□□□□□ -1.47
GPC6-202ENST00000617456 IGHV1OR15-1A0A075B7D0 117 aa5.87□□□□□ -1.47
GPC6-202ENST00000617456 SCO2A0A1W2PP80 73 aa5.87□□□□□ -1.47
GPC6-202ENST00000617456 LINC01546A6NGU7 62 aa5.87□□□□□ -1.47
GPC6-202ENST00000617456 IGLV2-8P01709 118 aa5.87□□□□□ -1.47
GPC6-202ENST00000617456 HBDP02042 147 aa5.87□□□□□ -1.47
GPC6-202ENST00000617456 FAM104BQ5XKR9 115 aa5.87□□□□□ -1.47
GPC6-202ENST00000617456 ZFAND2AQ8N6M9 145 aa5.87□□□□□ -1.47
GPC6-202ENST00000617456 NTN5Q8WTR8 489 aaPredicted RBP5.87□□□□□ -1.47
GPC6-202ENST00000617456 Q9H3A6 140 aa5.87□□□□□ -1.47
GPC6-202ENST00000617456 TRGV2A0A075B6R0 118 aa5.86□□□□□ -1.47
GPC6-202ENST00000617456 PAX4O43316 350 aa5.86□□□□□ -1.47
GPC6-202ENST00000617456 LTAP01374 205 aa5.86□□□□□ -1.47
GPC6-202ENST00000617456 SMR3BP02814 79 aaPredicted RBP5.86□□□□□ -1.47
GPC6-202ENST00000617456 RNASE4P34096 147 aaKnown RBP5.86□□□□□ -1.47
GPC6-202ENST00000617456 ESRGQ1W209 222 aa5.86□□□□□ -1.47
GPC6-202ENST00000617456 MIR17HGQ75NE6 70 aa5.86□□□□□ -1.47
GPC6-202ENST00000617456 PEX7O00628 323 aa5.85□□□□□ -1.47
GPC6-202ENST00000617456 TCRAP04437 139 aa5.85□□□□□ -1.47
GPC6-202ENST00000617456 PRB4P10163 310 aaPredicted RBP5.85□□□□□ -1.47
GPC6-202ENST00000617456 LINC00315P59091 139 aa5.85□□□□□ -1.47
GPC6-202ENST00000617456 HERVK_113P61574 105 aa5.85□□□□□ -1.47
GPC6-202ENST00000617456 LCE2CQ5TA81 110 aa5.85□□□□□ -1.47
GPC6-202ENST00000617456 Q6ZTI0 123 aa5.85□□□□□ -1.47
GPC6-202ENST00000617456 HIST1H4GQ99525 98 aa5.85□□□□□ -1.47
GPC6-202ENST00000617456 CYSTM1Q9H1C7 97 aa5.85□□□□□ -1.47
GPC6-202ENST00000617456 PRO0255Q9UI72 69 aa5.85□□□□□ -1.47
GPC6-202ENST00000617456 A0A096LNJ9 63 aa5.84□□□□□ -1.47
GPC6-202ENST00000617456 TRGV1A0A0A0MS02 117 aa5.84□□□□□ -1.47
GPC6-202ENST00000617456 LINC01549A6NIU2 74 aa5.84□□□□□ -1.47
GPC6-202ENST00000617456 ATXN8Q156A1 80 aa5.84□□□□□ -1.47
GPC6-202ENST00000617456 CENPWQ5EE01 88 aa5.84□□□□□ -1.47
GPC6-202ENST00000617456 VSIG2Q96IQ7 327 aa5.84□□□□□ -1.47
GPC6-202ENST00000617456 RBM12B-AS1Q9P1G2 102 aa5.84□□□□□ -1.47
GPC6-202ENST00000617456 IGKV2-40A0A087WW87 121 aaPredicted RBP5.83□□□□□ -1.48
GPC6-202ENST00000617456 A0A096LPF7 62 aa5.83□□□□□ -1.48
GPC6-202ENST00000617456 A0A0B4J2C4 111 aa5.83□□□□□ -1.48
GPC6-202ENST00000617456 IGKV2D-40P01614 121 aaPredicted RBP5.83□□□□□ -1.48
GPC6-202ENST00000617456 KRTAP10-1P60331 282 aa5.83□□□□□ -1.48
GPC6-202ENST00000617456 CACNG7P62955 275 aa5.83□□□□□ -1.48
GPC6-202ENST00000617456 HAMPP81172 84 aa5.83□□□□□ -1.48
GPC6-202ENST00000617456 PRR26Q8N8Z3 221 aa5.83□□□□□ -1.48
GPC6-202ENST00000617456 TMEM167BQ9NRX6 74 aa5.83□□□□□ -1.48
GPC6-202ENST00000617456 ICOSQ9Y6W8 199 aa5.83□□□□□ -1.48
GPC6-202ENST00000617456 IGKV2D-26A0A0A0MRZ7 120 aa5.82□□□□□ -1.48
GPC6-202ENST00000617456 TRAV21A0A0B4J279 112 aa5.82□□□□□ -1.48
GPC6-202ENST00000617456 LOC107984156A0A0G2JMH3 177 aa5.82□□□□□ -1.48
GPC6-202ENST00000617456 DNAH10OSP0CZ25 163 aa5.82□□□□□ -1.48
GPC6-202ENST00000617456 Q6ZRN7 208 aaPredicted RBP5.82□□□□□ -1.48
GPC6-202ENST00000617456 ARL17AQ8IVW1 177 aa5.82□□□□□ -1.48
GPC6-202ENST00000617456 IBA57-AS1B1ANH7 110 aa5.81□□□□□ -1.48
GPC6-202ENST00000617456 NDUFC1O43677 76 aa5.81□□□□□ -1.48
GPC6-202ENST00000617456 FHL2Q14192 279 aa5.81□□□□□ -1.48
GPC6-202ENST00000617456 TWIST1Q15672 202 aa5.81□□□□□ -1.48
GPC6-202ENST00000617456 PRR9Q5T870 116 aa5.81□□□□□ -1.48
GPC6-202ENST00000617456 KTN1-AS1Q86SY8 53 aa5.81□□□□□ -1.48
GPC6-202ENST00000617456 DAND5Q8N907 189 aa5.81□□□□□ -1.48
GPC6-202ENST00000617456 H3BVH4 76 aa5.8□□□□□ -1.48
GPC6-202ENST00000617456 NDUFS5O43920 106 aa5.8□□□□□ -1.48
GPC6-202ENST00000617456 ORMDL2Q53FV1 153 aa5.8□□□□□ -1.48
GPC6-202ENST00000617456 PIK3CD-AS1Q5SR53 167 aa5.8□□□□□ -1.48
GPC6-202ENST00000617456 LYPD5Q6UWN5 251 aa5.8□□□□□ -1.48
GPC6-202ENST00000617456 Q6ZSN1 163 aa5.8□□□□□ -1.48
GPC6-202ENST00000617456 TRGV4A0A0C4DH28 118 aa5.79□□□□□ -1.48
GPC6-202ENST00000617456 TRBV30A0A0K0K1B3 111 aa5.79□□□□□ -1.48
GPC6-202ENST00000617456 TRBV27A0A0K0K1C4 114 aa5.79□□□□□ -1.48
GPC6-202ENST00000617456 TEX49A0A1B0GTD5 131 aa5.79□□□□□ -1.48
GPC6-202ENST00000617456 Q8N8P6 123 aa5.79□□□□□ -1.48
GPC6-202ENST00000617456 Q8TAT8 98 aa5.79□□□□□ -1.48
GPC6-202ENST00000617456 PRO1854Q9UHT4 67 aa5.79□□□□□ -1.48
GPC6-202ENST00000617456 A0A087WTM6 91 aa5.78□□□□□ -1.48
GPC6-202ENST00000617456 TMSB15BA0A087X1C1 80 aa5.78□□□□□ -1.48
GPC6-202ENST00000617456 IGHV3-16A0A0C4DH30 117 aa5.78□□□□□ -1.48
GPC6-202ENST00000617456 HIGD1CA8MV81 97 aa5.78□□□□□ -1.48
GPC6-202ENST00000617456 SMKR1H3BMG3 65 aa5.78□□□□□ -1.48
GPC6-202ENST00000617456 K7EQD1 137 aa5.78□□□□□ -1.48
GPC6-202ENST00000617456 NXPH4O95158 308 aa5.78□□□□□ -1.48
GPC6-202ENST00000617456 CCKP06307 115 aa5.78□□□□□ -1.48
GPC6-202ENST00000617456 ARL14EPLP0DKL9 152 aa5.78□□□□□ -1.48
GPC6-202ENST00000617456 LGALS3P17931 250 aaKnown RBP5.78□□□□□ -1.48
GPC6-202ENST00000617456 IFI27P40305 119 aaPredicted RBP5.78□□□□□ -1.48
GPC6-202ENST00000617456 TMEM243Q9BU79 118 aa5.78□□□□□ -1.48
GPC6-202ENST00000617456 TRBV6-4A0A1B0GX49 114 aa5.77□□□□□ -1.49
GPC6-202ENST00000617456 C8orf87E5RJ46 101 aa5.77□□□□□ -1.49
GPC6-202ENST00000617456 H7BZZ5 65 aa5.77□□□□□ -1.49
GPC6-202ENST00000617456 KLKP1Q107X0 134 aa5.77□□□□□ -1.49
GPC6-202ENST00000617456 Q6JHZ5 121 aa5.77□□□□□ -1.49
GPC6-202ENST00000617456 SCGB1D4Q6XE38 83 aa5.77□□□□□ -1.49
GPC6-202ENST00000617456 PHF5AQ7RTV0 110 aaKnown RBP5.77□□□□□ -1.49
GPC6-202ENST00000617456 TMEM75Q8N9X5 138 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms