RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 COX6CP09669 75 aa14.2□□□□□ -0.14
CNTNAP3B-212ENST00000617422 IFITM1P13164 125 aa14.2□□□□□ -0.14
CNTNAP3B-212ENST00000617422 MRPL23Q16540 153 aaKnown RBP14.2□□□□□ -0.14
CNTNAP3B-212ENST00000617422 ADAMTSL4-AS1Q5T5F5 129 aa14.2□□□□□ -0.14
CNTNAP3B-212ENST00000617422 ICOSQ9Y6W8 199 aa14.2□□□□□ -0.14
CNTNAP3B-212ENST00000617422 DNAH9Q9NYC9 4486 aa14.2□□□□□ -0.14
CNTNAP3B-212ENST00000617422 RPL13AP40429 203 aaKnown RBP14.19□□□□□ -0.14
CNTNAP3B-212ENST00000617422 IGKV3OR2-268A0A0C4DH90 116 aa14.18□□□□□ -0.14
CNTNAP3B-212ENST00000617422 NTN5Q8WTR8 489 aaPredicted RBP14.17□□□□□ -0.14
CNTNAP3B-212ENST00000617422 C11orf45Q8TAV5 145 aa14.17□□□□□ -0.14
CNTNAP3B-212ENST00000617422 NDUFA1O15239 70 aa14.16□□□□□ -0.14
CNTNAP3B-212ENST00000617422 HERVK_113P63121 156 aa14.16□□□□□ -0.14
CNTNAP3B-212ENST00000617422 A0A1B0GUV1 79 aa14.16□□□□□ -0.14
CNTNAP3B-212ENST00000617422 H3BT86 120 aa14.15□□□□□ -0.15
CNTNAP3B-212ENST00000617422 CIRBPQ14011 172 aaKnown RBP14.14□□□□□ -0.15
CNTNAP3B-212ENST00000617422 LYPD5Q6UWN5 251 aa14.13□□□□□ -0.15
CNTNAP3B-212ENST00000617422 UBE2WQ96B02 151 aa14.13□□□□□ -0.15
CNTNAP3B-212ENST00000617422 CLPSL2Q6UWE3 100 aa14.12□□□□□ -0.15
CNTNAP3B-212ENST00000617422 C2orf82Q6UX34 121 aa14.12□□□□□ -0.15
CNTNAP3B-212ENST00000617422 DEFB131BA0A096LNP1 70 aa14.12□□□□□ -0.15
CNTNAP3B-212ENST00000617422 SMIM1B2RUZ4 78 aa14.12□□□□□ -0.15
CNTNAP3B-212ENST00000617422 LELP1Q5T871 98 aa14.12□□□□□ -0.15
CNTNAP3B-212ENST00000617422 IGLV5-39A0A0G2JS06 123 aa14.11□□□□□ -0.15
CNTNAP3B-212ENST00000617422 H3BNG1 76 aa14.11□□□□□ -0.15
CNTNAP3B-212ENST00000617422 TRAV8-4A0A0B4J246 113 aa14.1□□□□□ -0.15
CNTNAP3B-212ENST00000617422 LINC00959A0A1B0GUT2 108 aa14.1□□□□□ -0.15
CNTNAP3B-212ENST00000617422 COPS9Q8WXC6 57 aa14.1□□□□□ -0.15
CNTNAP3B-212ENST00000617422 LST1O00453 97 aa14.1□□□□□ -0.15
CNTNAP3B-212ENST00000617422 SNCGO76070 127 aa14.09□□□□□ -0.15
CNTNAP3B-212ENST00000617422 NPC2P61916 151 aa14.09□□□□□ -0.15
CNTNAP3B-212ENST00000617422 STAB2Q8WWQ8 2551 aa14.09□□□□□ -0.15
CNTNAP3B-212ENST00000617422 TEX49A0A1B0GTD5 131 aa14.09□□□□□ -0.15
CNTNAP3B-212ENST00000617422 IGHV3OR16-9A0A0B4J2B5 98 aa14.08□□□□□ -0.16
CNTNAP3B-212ENST00000617422 LINC00269Q8N2A0 174 aa14.08□□□□□ -0.16
CNTNAP3B-212ENST00000617422 GAGE2BQ13066 116 aa14.06□□□□□ -0.16
CNTNAP3B-212ENST00000617422 GAGE2EQ4V326 116 aa14.06□□□□□ -0.16
CNTNAP3B-212ENST00000617422 ANAPC13Q9BS18 74 aa14.06□□□□□ -0.16
CNTNAP3B-212ENST00000617422 GAGE2DQ9UEU5 116 aa14.06□□□□□ -0.16
CNTNAP3B-212ENST00000617422 Q6Q795 121 aa14.05□□□□□ -0.16
CNTNAP3B-212ENST00000617422 LINC00308Q8TCZ7 52 aa14.05□□□□□ -0.16
CNTNAP3B-212ENST00000617422 Q9H8V8 135 aa14.05□□□□□ -0.16
CNTNAP3B-212ENST00000617422 ANGP03950 147 aaKnown RBP14.05□□□□□ -0.16
CNTNAP3B-212ENST00000617422 CLEC2BQ92478 149 aa14.05□□□□□ -0.16
CNTNAP3B-212ENST00000617422 ESRGQ1W209 222 aa14.04□□□□□ -0.16
CNTNAP3B-212ENST00000617422 XCL1P47992 114 aa14.03□□□□□ -0.16
CNTNAP3B-212ENST00000617422 C5orf38Q86SI9 138 aa14.03□□□□□ -0.16
CNTNAP3B-212ENST00000617422 WFDC10BQ8IUB3 73 aa14.03□□□□□ -0.16
CNTNAP3B-212ENST00000617422 PRKDCP78527 4128 aaKnown RBP14.03□□□□□ -0.16
CNTNAP3B-212ENST00000617422 DAND5Q8N907 189 aa14.03□□□□□ -0.16
CNTNAP3B-212ENST00000617422 FAM240AA0A1B0GVK7 77 aa14.02□□□□□ -0.16
CNTNAP3B-212ENST00000617422 REG3AQ06141 175 aa14.02□□□□□ -0.16
CNTNAP3B-212ENST00000617422 PPDPFQ9H3Y8 114 aa14.02□□□□□ -0.17
CNTNAP3B-212ENST00000617422 A0A087WZ39 114 aa14.01□□□□□ -0.17
CNTNAP3B-212ENST00000617422 MEGF8Q7Z7M0 2845 aa14.01□□□□□ -0.17
CNTNAP3B-212ENST00000617422 IGLV10-54A0A075B6I4 117 aa14□□□□□ -0.17
CNTNAP3B-212ENST00000617422 HERV-K104P63124 156 aa14□□□□□ -0.17
CNTNAP3B-212ENST00000617422 TRAV10A0A0B4J240 114 aa14□□□□□ -0.17
CNTNAP3B-212ENST00000617422 SS18Q15532 418 aa14□□□□□ -0.17
CNTNAP3B-212ENST00000617422 C15orf53Q8NAA6 179 aa13.99□□□□□ -0.17
CNTNAP3B-212ENST00000617422 ZNF625Q96I27 306 aaPredicted RBP13.99□□□□□ -0.17
CNTNAP3B-212ENST00000617422 B9D2Q9BPU9 175 aa13.99□□□□□ -0.17
CNTNAP3B-212ENST00000617422 KLK12Q9UKR0 248 aa13.99□□□□□ -0.17
CNTNAP3B-212ENST00000617422 COX7A2LO14548 114 aa13.98□□□□□ -0.17
CNTNAP3B-212ENST00000617422 CHCHD10Q8WYQ3 142 aaPredicted RBP13.97□□□□□ -0.17
CNTNAP3B-212ENST00000617422 PRR34Q9NV39 138 aa13.97□□□□□ -0.17
CNTNAP3B-212ENST00000617422 TTC32Q5I0X7 151 aa13.96□□□□□ -0.17
CNTNAP3B-212ENST00000617422 MEIG1Q5JSS6 88 aa13.96□□□□□ -0.17
CNTNAP3B-212ENST00000617422 ENHOQ6UWT2 76 aa13.96□□□□□ -0.17
CNTNAP3B-212ENST00000617422 NDUFV3P56181 108 aaKnown RBP13.96□□□□□ -0.18
CNTNAP3B-212ENST00000617422 COX7B2Q8TF08 81 aa13.95□□□□□ -0.18
CNTNAP3B-212ENST00000617422 TOMM7Q9P0U1 55 aa13.95□□□□□ -0.18
CNTNAP3B-212ENST00000617422 CD164L2Q6UWJ8 174 aa13.94□□□□□ -0.18
CNTNAP3B-212ENST00000617422 SOSTDC1Q6X4U4 206 aa13.94□□□□□ -0.18
CNTNAP3B-212ENST00000617422 CSMD3Q7Z407 3707 aa13.93□□□□□ -0.18
CNTNAP3B-212ENST00000617422 LYSTQ99698 3801 aa13.93□□□□□ -0.18
CNTNAP3B-212ENST00000617422 A0A0U1RRA0 63 aa13.92□□□□□ -0.18
CNTNAP3B-212ENST00000617422 TRACP01848 142 aa13.92□□□□□ -0.18
CNTNAP3B-212ENST00000617422 ACYP1P07311 99 aa13.92□□□□□ -0.18
CNTNAP3B-212ENST00000617422 NHLRC4P0CG21 123 aaPredicted RBP13.92□□□□□ -0.18
CNTNAP3B-212ENST00000617422 DYNC2H1Q8NCM8 4307 aaKnown RBP13.9□□□□□ -0.18
CNTNAP3B-212ENST00000617422 LINC00588Q9Y4M8 146 aa13.88□□□□□ -0.19
CNTNAP3B-212ENST00000617422 TRAV13-2A0A0B4J235 113 aa13.87□□□□□ -0.19
CNTNAP3B-212ENST00000617422 KIAA0087Q14695 138 aa13.86□□□□□ -0.19
CNTNAP3B-212ENST00000617422 LINC01556Q5JQF7 62 aa13.86□□□□□ -0.19
CNTNAP3B-212ENST00000617422 LINC01561Q8N1V8 128 aa13.86□□□□□ -0.19
CNTNAP3B-212ENST00000617422 TRBV7-7A0A0K0K1E9 115 aa13.85□□□□□ -0.19
CNTNAP3B-212ENST00000617422 DNAH1Q9P2D7 4330 aa13.85□□□□□ -0.19
CNTNAP3B-212ENST00000617422 KRTAP26-1Q6PEX3 210 aa13.84□□□□□ -0.19
CNTNAP3B-212ENST00000617422 Q8IZM0 81 aa13.84□□□□□ -0.19
CNTNAP3B-212ENST00000617422 CRPP02741 224 aa13.83□□□□□ -0.19
CNTNAP3B-212ENST00000617422 C6orf226Q5I0X4 101 aa13.83□□□□□ -0.19
CNTNAP3B-212ENST00000617422 RPL28P46779 137 aaKnown RBP13.83□□□□□ -0.2
CNTNAP3B-212ENST00000617422 DNAH7Q8WXX0 4024 aa13.83□□□□□ -0.2
CNTNAP3B-212ENST00000617422 BAALC-AS2P0C853 105 aa13.82□□□□□ -0.2
CNTNAP3B-212ENST00000617422 DNAH10OSP0CZ25 163 aa13.82□□□□□ -0.2
CNTNAP3B-212ENST00000617422 MALP21145 153 aa13.82□□□□□ -0.2
CNTNAP3B-212ENST00000617422 TENM2Q9NT68 2774 aa13.81□□□□□ -0.2
CNTNAP3B-212ENST00000617422 IMUPQ9GZP8 106 aa13.81□□□□□ -0.2
CNTNAP3B-212ENST00000617422 PLECQ15149 4684 aaKnown RBP13.8□□□□□ -0.2
CNTNAP3B-212ENST00000617422 B5MCH6 92 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms