RNA–Protein interactions for RNA: ENST00000617399.1

NBR1-208, Transcript of NBR1, autophagy cargo receptor, human

Gene NBR1, Length 63 nt, Biotype misc RNA, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NBR1-208	ENST00000617399	TPT1P8	Q9HAU6	139 aa		-3.59	□□□□□ -2.98
NBR1-208	ENST00000617399	CCDC141	Q6ZP82	1450 aa		-3.6	□□□□□ -2.99
NBR1-208	ENST00000617399	DNAH1	Q9P2D7	4330 aa		-3.6	□□□□□ -2.99
NBR1-208	ENST00000617399	MYOZ3	Q8TDC0	251 aa		-3.6	□□□□□ -2.99
NBR1-208	ENST00000617399	MYH7	P12883	1935 aa		-3.61	□□□□□ -2.99
NBR1-208	ENST00000617399	LOC100130705	A0A1B0GUX0	176 aa		-3.61	□□□□□ -2.99
NBR1-208	ENST00000617399	CHKB-CPT1B	H3BT56	60 aa		-3.61	□□□□□ -2.99
NBR1-208	ENST00000617399	AKAP14	Q86UN6	197 aa		-3.61	□□□□□ -2.99
NBR1-208	ENST00000617399	TSTD1	Q8NFU3	115 aa		-3.61	□□□□□ -2.99
NBR1-208	ENST00000617399	TCEAL4	Q96EI5	215 aa		-3.61	□□□□□ -2.99
NBR1-208	ENST00000617399	DNHD1	Q96M86	4753 aa		-3.62	□□□□□ -2.99
NBR1-208	ENST00000617399	RPS25	P62851	125 aa	Known RBP	-3.62	□□□□□ -2.99
NBR1-208	ENST00000617399	SEC11A	P67812	179 aa		-3.62	□□□□□ -2.99
NBR1-208	ENST00000617399	PDCD10	Q9BUL8	212 aa		-3.62	□□□□□ -2.99
NBR1-208	ENST00000617399	ARL2-SNX15	V9GYD0	113 aa		-3.62	□□□□□ -2.99
NBR1-208	ENST00000617399	MTOR	P42345	2549 aa		-3.63	□□□□□ -2.99
NBR1-208	ENST00000617399	WDR87	Q6ZQQ6	2873 aa		-3.63	□□□□□ -2.99
NBR1-208	ENST00000617399		A0A0C4DFX4	3053 aa		-3.63	□□□□□ -2.99
NBR1-208	ENST00000617399	SCGB1A1	P11684	91 aa		-3.63	□□□□□ -2.99
NBR1-208	ENST00000617399	BTG2	P78543	158 aa		-3.63	□□□□□ -2.99
NBR1-208	ENST00000617399	CCDC167	Q9P0B6	97 aa		-3.63	□□□□□ -2.99
NBR1-208	ENST00000617399	COL14A1	Q05707	1796 aa	Known RBP	-3.63	□□□□□ -2.99
NBR1-208	ENST00000617399	CFTR	P13569	1480 aa		-3.64	□□□□□ -2.99
NBR1-208	ENST00000617399	LELP1	Q5T871	98 aa		-3.64	□□□□□ -2.99
NBR1-208	ENST00000617399	NBEA	Q8NFP9	2946 aa		-3.64	□□□□□ -2.99
NBR1-208	ENST00000617399	QRICH2	Q9H0J4	1663 aa		-3.65	□□□□□ -2.99
NBR1-208	ENST00000617399	CDC42SE2	Q9NRR3	84 aa		-3.65	□□□□□ -2.99
NBR1-208	ENST00000617399	CCDC168	Q8NDH2	2452 aa		-3.65	□□□□□ -2.99
NBR1-208	ENST00000617399	SACS	Q9NZJ4	4579 aa		-3.65	□□□□□ -2.99
NBR1-208	ENST00000617399	GCN1	Q92616	2671 aa	Known RBP	-3.66	□□□□□ -2.99
NBR1-208	ENST00000617399	LRRK2	Q5S007	2527 aa		-3.66	□□□□□ -2.99
NBR1-208	ENST00000617399	SPANXD	Q9BXN6	97 aa		-3.66	□□□□□ -3
NBR1-208	ENST00000617399	CPSF1	Q10570	1443 aa	Known RBP	-3.67	□□□□□ -3
NBR1-208	ENST00000617399	COPS9	Q8WXC6	57 aa		-3.67	□□□□□ -3
NBR1-208	ENST00000617399	SELENOS	Q9BQE4	189 aa		-3.67	□□□□□ -3
NBR1-208	ENST00000617399	SERP1	Q9Y6X1	66 aa		-3.67	□□□□□ -3
NBR1-208	ENST00000617399	CIC	Q96RK0	1608 aa	Predicted RBP	-3.68	□□□□□ -3
NBR1-208	ENST00000617399	HEPN1	Q6WQI6	88 aa		-3.68	□□□□□ -3
NBR1-208	ENST00000617399	PLEKHH2	Q8IVE3	1493 aa		-3.68	□□□□□ -3
NBR1-208	ENST00000617399	SMG6	Q86US8	1419 aa	Known RBP	-3.69	□□□□□ -3
NBR1-208	ENST00000617399	LINC00474	Q9P2X8	69 aa		-3.69	□□□□□ -3
NBR1-208	ENST00000617399	NLRP1	Q9C000	1473 aa		-3.69	□□□□□ -3
NBR1-208	ENST00000617399	USP9X	Q93008	2570 aa	Predicted RBP	-3.69	□□□□□ -3
NBR1-208	ENST00000617399	UTP20	O75691	2785 aa	Known RBP	-3.69	□□□□□ -3
NBR1-208	ENST00000617399	FAM186A	A6NE01	2351 aa		-3.7	□□□□□ -3
NBR1-208	ENST00000617399	WFDC13	Q8IUB5	93 aa		-3.7	□□□□□ -3
NBR1-208	ENST00000617399	MRPL34	Q9BQ48	92 aa	Known RBP	-3.7	□□□□□ -3
NBR1-208	ENST00000617399	RERGL	Q9H628	205 aa		-3.7	□□□□□ -3
NBR1-208	ENST00000617399	UQCR10	Q9UDW1	63 aa		-3.7	□□□□□ -3
NBR1-208	ENST00000617399	SCN7A	Q01118	1682 aa		-3.71	□□□□□ -3
NBR1-208	ENST00000617399	RIF1	Q5UIP0	2472 aa	Known RBP	-3.71	□□□□□ -3
NBR1-208	ENST00000617399	DEFA5	Q01523	94 aa		-3.71	□□□□□ -3
NBR1-208	ENST00000617399	SHROOM2	Q13796	1616 aa		-3.71	□□□□□ -3
NBR1-208	ENST00000617399	TRAV30	A0A087WSZ9	112 aa		-3.72	□□□□□ -3
NBR1-208	ENST00000617399		A0A1B0GU69	56 aa		-3.72	□□□□□ -3
NBR1-208	ENST00000617399	PPP3R2	Q96LZ3	170 aa		-3.72	□□□□□ -3
NBR1-208	ENST00000617399	NUP188	Q5SRE5	1749 aa		-3.73	□□□□□ -3.01
NBR1-208	ENST00000617399	EHBP1L1	Q8N3D4	1523 aa		-3.73	□□□□□ -3.01
NBR1-208	ENST00000617399	CDKN2A-AS1	Q9UH64	79 aa		-3.73	□□□□□ -3.01
NBR1-208	ENST00000617399	PDCD11	Q14690	1871 aa	Known RBP	-3.73	□□□□□ -3.01
NBR1-208	ENST00000617399	ADGRL2	O95490	1459 aa		-3.73	□□□□□ -3.01
NBR1-208	ENST00000617399	GRIN2A	Q12879	1464 aa		-3.73	□□□□□ -3.01
NBR1-208	ENST00000617399	CMYA5	Q8N3K9	4069 aa		-3.74	□□□□□ -3.01
NBR1-208	ENST00000617399		A0A1B0GWA3	101 aa		-3.74	□□□□□ -3.01
NBR1-208	ENST00000617399	C9orf92	A6NGG3	77 aa		-3.74	□□□□□ -3.01
NBR1-208	ENST00000617399	RELN	P78509	3460 aa		-3.75	□□□□□ -3.01
NBR1-208	ENST00000617399	COMMD6	Q7Z4G1	85 aa		-3.75	□□□□□ -3.01
NBR1-208	ENST00000617399	COPZ2	Q9P299	210 aa		-3.75	□□□□□ -3.01
NBR1-208	ENST00000617399	CCL22	O00626	93 aa		-3.76	□□□□□ -3.01
NBR1-208	ENST00000617399	MT1H	P80294	61 aa		-3.76	□□□□□ -3.01
NBR1-208	ENST00000617399	ANKRD36	A6QL64	1941 aa		-3.78	□□□□□ -3.01
NBR1-208	ENST00000617399	NCOA3	Q9Y6Q9	1424 aa		-3.78	□□□□□ -3.01
NBR1-208	ENST00000617399	C9orf153	Q5TBE3	101 aa		-3.78	□□□□□ -3.01
NBR1-208	ENST00000617399	LZIC	Q8WZA0	190 aa		-3.78	□□□□□ -3.01
NBR1-208	ENST00000617399	FAM223B	A6NKX1	122 aa		-3.79	□□□□□ -3.02
NBR1-208	ENST00000617399	ARL11	Q969Q4	196 aa		-3.79	□□□□□ -3.02
NBR1-208	ENST00000617399	HIGD1B	Q9P298	99 aa		-3.79	□□□□□ -3.02
NBR1-208	ENST00000617399	MIF4GD	A9UHW6	222 aa	Known RBP	-3.8	□□□□□ -3.02
NBR1-208	ENST00000617399	C5orf38	Q86SI9	138 aa		-3.8	□□□□□ -3.02
NBR1-208	ENST00000617399	ANKRD50	Q9ULJ7	1429 aa		-3.8	□□□□□ -3.02
NBR1-208	ENST00000617399	KIAA1551	Q9HCM1	1747 aa		-3.81	□□□□□ -3.02
NBR1-208	ENST00000617399	NBEAL2	Q6ZNJ1	2754 aa		-3.81	□□□□□ -3.02
NBR1-208	ENST00000617399	SNCA	P37840	140 aa		-3.81	□□□□□ -3.02
NBR1-208	ENST00000617399	SNRNP25	Q9BV90	132 aa	Known RBP	-3.81	□□□□□ -3.02
NBR1-208	ENST00000617399	C8orf59	Q8N0T1	100 aa	Predicted RBP	-3.82	□□□□□ -3.02
NBR1-208	ENST00000617399	ANP32B	Q92688	251 aa	Known RBP	-3.82	□□□□□ -3.02
NBR1-208	ENST00000617399	LINC00846	Q9NV44	126 aa		-3.82	□□□□□ -3.02
NBR1-208	ENST00000617399	EDC4	Q6P2E9	1401 aa	Known RBP	-3.82	□□□□□ -3.02
NBR1-208	ENST00000617399	ROBO1	Q9Y6N7	1651 aa		-3.83	□□□□□ -3.02
NBR1-208	ENST00000617399	DR1	Q01658	176 aa		-3.83	□□□□□ -3.02
NBR1-208	ENST00000617399	SFTA2	Q6UW10	78 aa		-3.83	□□□□□ -3.02
NBR1-208	ENST00000617399	C6orf201	Q7Z4U5	140 aa		-3.83	□□□□□ -3.02
NBR1-208	ENST00000617399	LRRC37A	A6NMS7	1700 aa		-3.84	□□□□□ -3.02
NBR1-208	ENST00000617399	PHLPP1	O60346	1717 aa		-3.84	□□□□□ -3.02
NBR1-208	ENST00000617399	TRIO	O75962	3097 aa		-3.85	□□□□□ -3.03
NBR1-208	ENST00000617399	SAA2	P0DJI9	122 aa	Predicted RBP	-3.85	□□□□□ -3.03
NBR1-208	ENST00000617399	ARPC4	P59998	168 aa		-3.85	□□□□□ -3.03
NBR1-208	ENST00000617399	CATR1	Q13166	79 aa		-3.85	□□□□□ -3.03
NBR1-208	ENST00000617399	SMIM21	Q3B7S5	101 aa		-3.85	□□□□□ -3.03
NBR1-208	ENST00000617399		Q56UQ5	140 aa		-3.85	□□□□□ -3.03

Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms