RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 TGP01266 2768 aa5.3□□□□□ -1.56
NEK3-207ENST00000617054 CFC1BP0CG36 223 aa5.3□□□□□ -1.56
NEK3-207ENST00000617054 CFC1P0CG37 223 aa5.3□□□□□ -1.56
NEK3-207ENST00000617054 SS18Q15532 418 aa5.3□□□□□ -1.56
NEK3-207ENST00000617054 TAL2Q16559 108 aa5.3□□□□□ -1.56
NEK3-207ENST00000617054 CHCHD10Q8WYQ3 142 aaPredicted RBP5.3□□□□□ -1.56
NEK3-207ENST00000617054 UBE2WQ96B02 151 aa5.3□□□□□ -1.56
NEK3-207ENST00000617054 TEX48A0A1B0GUV7 120 aa5.29□□□□□ -1.56
NEK3-207ENST00000617054 IGLL5B9A064 214 aa5.29□□□□□ -1.56
NEK3-207ENST00000617054 MEIG1Q5JSS6 88 aa5.29□□□□□ -1.56
NEK3-207ENST00000617054 NDUFA1O15239 70 aa5.29□□□□□ -1.56
NEK3-207ENST00000617054 PFN2P35080 140 aa5.29□□□□□ -1.56
NEK3-207ENST00000617054 ENHOQ6UWT2 76 aa5.29□□□□□ -1.56
NEK3-207ENST00000617054 COX7B2Q8TF08 81 aa5.29□□□□□ -1.56
NEK3-207ENST00000617054 A0A087WZ39 114 aa5.29□□□□□ -1.56
NEK3-207ENST00000617054 TMEM238C9JI98 176 aa5.29□□□□□ -1.56
NEK3-207ENST00000617054 DNAH10Q8IVF4 4471 aa5.29□□□□□ -1.56
NEK3-207ENST00000617054 A0A1W2PPM0 123 aa5.28□□□□□ -1.56
NEK3-207ENST00000617054 C6orf226Q5I0X4 101 aa5.28□□□□□ -1.56
NEK3-207ENST00000617054 MTURNQ8N3F0 131 aa5.28□□□□□ -1.56
NEK3-207ENST00000617054 SPANXB1Q9NS25 103 aaPredicted RBP5.28□□□□□ -1.56
NEK3-207ENST00000617054 C6orf223Q8N319 242 aa5.28□□□□□ -1.56
NEK3-207ENST00000617054 GAGE12HA6NDE8 117 aa5.27□□□□□ -1.57
NEK3-207ENST00000617054 C9orf116Q5BN46 136 aaPredicted RBP5.27□□□□□ -1.57
NEK3-207ENST00000617054 SOSTDC1Q6X4U4 206 aa5.27□□□□□ -1.57
NEK3-207ENST00000617054 LOC107984156A0A0G2JMH3 177 aa5.27□□□□□ -1.57
NEK3-207ENST00000617054 ARL17AQ8IVW1 177 aa5.27□□□□□ -1.57
NEK3-207ENST00000617054 TSPAN13O95857 204 aa5.26□□□□□ -1.57
NEK3-207ENST00000617054 MIAQ16674 131 aa5.26□□□□□ -1.57
NEK3-207ENST00000617054 CD164L2Q6UWJ8 174 aa5.26□□□□□ -1.57
NEK3-207ENST00000617054 SPCS1Q9Y6A9 102 aa5.26□□□□□ -1.57
NEK3-207ENST00000617054 PLECQ15149 4684 aaKnown RBP5.26□□□□□ -1.57
NEK3-207ENST00000617054 COX7A2LO14548 114 aa5.26□□□□□ -1.57
NEK3-207ENST00000617054 LINC00158P58513 81 aa5.26□□□□□ -1.57
NEK3-207ENST00000617054 FOXI1Q12951 378 aa5.26□□□□□ -1.57
NEK3-207ENST00000617054 SH2D6Q7Z4S9 175 aa5.26□□□□□ -1.57
NEK3-207ENST00000617054 Q9HAA7 133 aa5.26□□□□□ -1.57
NEK3-207ENST00000617054 A0A1B0GWB2 263 aa5.26□□□□□ -1.57
NEK3-207ENST00000617054 B5MCH6 92 aa5.26□□□□□ -1.57
NEK3-207ENST00000617054 FABP2P12104 132 aa5.26□□□□□ -1.57
NEK3-207ENST00000617054 RPL24P83731 157 aaKnown RBP5.26□□□□□ -1.57
NEK3-207ENST00000617054 MIR7-3HGQ8N6C7 128 aa5.26□□□□□ -1.57
NEK3-207ENST00000617054 TRAV10A0A0B4J240 114 aa5.25□□□□□ -1.57
NEK3-207ENST00000617054 H3BMG7 143 aa5.25□□□□□ -1.57
NEK3-207ENST00000617054 CRPP02741 224 aa5.25□□□□□ -1.57
NEK3-207ENST00000617054 CIRBPQ14011 172 aaKnown RBP5.25□□□□□ -1.57
NEK3-207ENST00000617054 LINC00308Q8TCZ7 52 aa5.25□□□□□ -1.57
NEK3-207ENST00000617054 H3BNG1 76 aa5.25□□□□□ -1.57
NEK3-207ENST00000617054 LINC00588Q9Y4M8 146 aa5.25□□□□□ -1.57
NEK3-207ENST00000617054 STARD9Q9P2P6 4700 aa5.25□□□□□ -1.57
NEK3-207ENST00000617054 C10orf25Q5T742 122 aa5.24□□□□□ -1.57
NEK3-207ENST00000617054 SPANXDQ9BXN6 97 aa5.24□□□□□ -1.57
NEK3-207ENST00000617054 PRR34Q9NV39 138 aa5.24□□□□□ -1.57
NEK3-207ENST00000617054 SPANXCQ9NY87 97 aa5.24□□□□□ -1.57
NEK3-207ENST00000617054 PRO1854Q9UHT4 67 aa5.24□□□□□ -1.57
NEK3-207ENST00000617054 NHLRC4P0CG21 123 aaPredicted RBP5.24□□□□□ -1.57
NEK3-207ENST00000617054 OCIAD2Q56VL3 154 aa5.24□□□□□ -1.57
NEK3-207ENST00000617054 CKS1BP61024 79 aa5.24□□□□□ -1.57
NEK3-207ENST00000617054 KIAA0087Q14695 138 aa5.24□□□□□ -1.57
NEK3-207ENST00000617054 Q1RN00 199 aa5.24□□□□□ -1.57
NEK3-207ENST00000617054 HIGD2BQ4VC39 106 aa5.24□□□□□ -1.57
NEK3-207ENST00000617054 DNAH1Q9P2D7 4330 aa5.23□□□□□ -1.57
NEK3-207ENST00000617054 K7EP34 96 aa5.23□□□□□ -1.57
NEK3-207ENST00000617054 UNQ6190/PRO20217Q6UXQ8 127 aa5.23□□□□□ -1.57
NEK3-207ENST00000617054 PRR3P79522 188 aaKnown RBP5.23□□□□□ -1.57
NEK3-207ENST00000617054 IGKV2D-24A0A075B6R9 120 aa5.22□□□□□ -1.57
NEK3-207ENST00000617054 SCGB1C2P0DMR2 95 aa5.22□□□□□ -1.57
NEK3-207ENST00000617054 PSMB2P49721 201 aa5.22□□□□□ -1.57
NEK3-207ENST00000617054 FBN3Q75N90 2809 aa5.22□□□□□ -1.57
NEK3-207ENST00000617054 HERV-K104P63124 156 aa5.22□□□□□ -1.57
NEK3-207ENST00000617054 B9D2Q9BPU9 175 aa5.22□□□□□ -1.57
NEK3-207ENST00000617054 ERG28Q9UKR5 140 aa5.22□□□□□ -1.57
NEK3-207ENST00000617054 TIMM17BO60830 172 aa5.21□□□□□ -1.57
NEK3-207ENST00000617054 GTF2H5Q6ZYL4 71 aa5.21□□□□□ -1.57
NEK3-207ENST00000617054 Q8IZM0 81 aa5.21□□□□□ -1.57
NEK3-207ENST00000617054 SPAG11BQ08648 103 aa5.21□□□□□ -1.58
NEK3-207ENST00000617054 CASC10Q5T4H9 136 aa5.21□□□□□ -1.58
NEK3-207ENST00000617054 KMT2AQ03164 3969 aa5.21□□□□□ -1.58
NEK3-207ENST00000617054 LECT2O14960 151 aa5.21□□□□□ -1.58
NEK3-207ENST00000617054 TCL1BO95988 128 aa5.21□□□□□ -1.58
NEK3-207ENST00000617054 RPL13AP40429 203 aaKnown RBP5.21□□□□□ -1.58
NEK3-207ENST00000617054 CCL18P55774 89 aa5.21□□□□□ -1.58
NEK3-207ENST00000617054 CBY1Q9Y3M2 126 aa5.21□□□□□ -1.58
NEK3-207ENST00000617054 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.2□□□□□ -1.58
NEK3-207ENST00000617054 A0A0B4J2C4 111 aa5.2□□□□□ -1.58
NEK3-207ENST00000617054 TRIAP1O43715 76 aa5.2□□□□□ -1.58
NEK3-207ENST00000617054 LINC01556Q5JQF7 62 aa5.2□□□□□ -1.58
NEK3-207ENST00000617054 KRTAP26-1Q6PEX3 210 aa5.2□□□□□ -1.58
NEK3-207ENST00000617054 WFDC2Q14508 124 aa5.19□□□□□ -1.58
NEK3-207ENST00000617054 SND1-IT1Q9HBX3 110 aa5.19□□□□□ -1.58
NEK3-207ENST00000617054 IGKV2-28A0A075B6P5 120 aa5.19□□□□□ -1.58
NEK3-207ENST00000617054 IBA57-AS1B1ANH7 110 aa5.19□□□□□ -1.58
NEK3-207ENST00000617054 IGKV2D-28P01615 120 aa5.19□□□□□ -1.58
NEK3-207ENST00000617054 IFITM1P13164 125 aa5.19□□□□□ -1.58
NEK3-207ENST00000617054 C15orf53Q8NAA6 179 aa5.19□□□□□ -1.58
NEK3-207ENST00000617054 VPS25Q9BRG1 176 aa5.19□□□□□ -1.58
NEK3-207ENST00000617054 LINC00337Q8N6G1 96 aa5.19□□□□□ -1.58
NEK3-207ENST00000617054 Q8NDZ9 215 aa5.19□□□□□ -1.58
NEK3-207ENST00000617054 CLEC2BQ92478 149 aa5.19□□□□□ -1.58
NEK3-207ENST00000617054 TRAV8-4A0A0B4J246 113 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms