RNA–Protein interactions for RNA: ENST00000617003.1

AP3S2-216, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

BASIC

Gene AP3S2, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-216ENST00000617003 UBE2D1P51668 147 aa10.55□□□□□ -0.72
AP3S2-216ENST00000617003 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.54□□□□□ -0.72
AP3S2-216ENST00000617003 LINC01549A6NIU2 74 aa10.54□□□□□ -0.72
AP3S2-216ENST00000617003 PAPPA-AS1Q5QFB9 102 aa10.54□□□□□ -0.72
AP3S2-216ENST00000617003 HINT1P49773 126 aaPredicted RBP10.53□□□□□ -0.72
AP3S2-216ENST00000617003 Q6ZSA8 131 aa10.53□□□□□ -0.72
AP3S2-216ENST00000617003 ZNF561-AS1K7EIQ3 104 aa10.52□□□□□ -0.72
AP3S2-216ENST00000617003 ODF1Q14990 250 aa10.52□□□□□ -0.72
AP3S2-216ENST00000617003 SDIM1Q6ZPB5 146 aa10.52□□□□□ -0.72
AP3S2-216ENST00000617003 BOD1L2Q8IYS8 172 aa10.52□□□□□ -0.72
AP3S2-216ENST00000617003 APOMO95445 188 aa10.52□□□□□ -0.73
AP3S2-216ENST00000617003 BVES-AS1Q5T3Y7 98 aa10.52□□□□□ -0.73
AP3S2-216ENST00000617003 IGLV4-69A0A075B6H9 119 aa10.51□□□□□ -0.73
AP3S2-216ENST00000617003 ANKRD39Q53RE8 183 aa10.51□□□□□ -0.73
AP3S2-216ENST00000617003 C2orf91Q6ZV80 131 aa10.51□□□□□ -0.73
AP3S2-216ENST00000617003 IGHV3-64A0A075B6Q5 118 aa10.5□□□□□ -0.73
AP3S2-216ENST00000617003 TRAV12-1A0A0B4J245 112 aa10.5□□□□□ -0.73
AP3S2-216ENST00000617003 FAM19A3Q7Z5A8 133 aa10.5□□□□□ -0.73
AP3S2-216ENST00000617003 A0A087WZ39 114 aa10.49□□□□□ -0.73
AP3S2-216ENST00000617003 SMR3BP02814 79 aaPredicted RBP10.49□□□□□ -0.73
AP3S2-216ENST00000617003 SEC11AP67812 179 aa10.49□□□□□ -0.73
AP3S2-216ENST00000617003 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.48□□□□□ -0.73
AP3S2-216ENST00000617003 DPM2O94777 84 aa10.48□□□□□ -0.73
AP3S2-216ENST00000617003 IGKCP01834 107 aa10.48□□□□□ -0.73
AP3S2-216ENST00000617003 SYCNQ0VAF6 134 aa10.48□□□□□ -0.73
AP3S2-216ENST00000617003 CST9LQ9H4G1 147 aa10.48□□□□□ -0.73
AP3S2-216ENST00000617003 A0A0J9YXV3 536 aa10.48□□□□□ -0.73
AP3S2-216ENST00000617003 SPAG11BQ08648 103 aa10.48□□□□□ -0.73
AP3S2-216ENST00000617003 Q8N1X5 172 aa10.48□□□□□ -0.73
AP3S2-216ENST00000617003 CHAC1Q9BUX1 264 aa10.48□□□□□ -0.73
AP3S2-216ENST00000617003 PANO1I0J062 215 aa10.47□□□□□ -0.73
AP3S2-216ENST00000617003 PLNP26678 52 aa10.47□□□□□ -0.73
AP3S2-216ENST00000617003 PMVKQ15126 192 aa10.47□□□□□ -0.73
AP3S2-216ENST00000617003 SCXQ7RTU7 201 aa10.47□□□□□ -0.73
AP3S2-216ENST00000617003 C2orf48Q96LS8 159 aa10.47□□□□□ -0.73
AP3S2-216ENST00000617003 CARD19Q96LW7 228 aa10.47□□□□□ -0.73
AP3S2-216ENST00000617003 KRTAP4-5Q9BYR2 181 aa10.47□□□□□ -0.73
AP3S2-216ENST00000617003 HIGD1BQ9P298 99 aa10.47□□□□□ -0.73
AP3S2-216ENST00000617003 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.47□□□□□ -0.73
AP3S2-216ENST00000617003 HERVK_113P63121 156 aa10.46□□□□□ -0.74
AP3S2-216ENST00000617003 HSD52Q0P140 79 aa10.46□□□□□ -0.74
AP3S2-216ENST00000617003 Q6ZRU5 148 aa10.46□□□□□ -0.74
AP3S2-216ENST00000617003 LINC01561Q8N1V8 128 aa10.46□□□□□ -0.74
AP3S2-216ENST00000617003 CIRBP-AS1Q8TBR5 109 aa10.46□□□□□ -0.74
AP3S2-216ENST00000617003 CAMK2N2Q96S95 79 aa10.46□□□□□ -0.74
AP3S2-216ENST00000617003 GEMIN7Q9H840 131 aaKnown RBP10.46□□□□□ -0.74
AP3S2-216ENST00000617003 VPS13BQ7Z7G8 4022 aa10.45□□□□□ -0.74
AP3S2-216ENST00000617003 KIAA0087Q14695 138 aa10.44□□□□□ -0.74
AP3S2-216ENST00000617003 CDKN2A-AS1Q9UH64 79 aa10.44□□□□□ -0.74
AP3S2-216ENST00000617003 TINCRA0A1B0GVN0 87 aa10.43□□□□□ -0.74
AP3S2-216ENST00000617003 CHTF8P0CG12 524 aa10.43□□□□□ -0.74
AP3S2-216ENST00000617003 TP73-AS1Q9UF72 201 aa10.43□□□□□ -0.74
AP3S2-216ENST00000617003 F8VRH5 84 aa10.43□□□□□ -0.74
AP3S2-216ENST00000617003 TAX1BP3O14907 124 aa10.43□□□□□ -0.74
AP3S2-216ENST00000617003 UBE2V1Q13404 147 aa10.43□□□□□ -0.74
AP3S2-216ENST00000617003 DPH3Q96FX2 82 aa10.43□□□□□ -0.74
AP3S2-216ENST00000617003 ABCA13Q86UQ4 5058 aa10.42□□□□□ -0.74
AP3S2-216ENST00000617003 A6NDN8 102 aa10.42□□□□□ -0.74
AP3S2-216ENST00000617003 CIRBPQ14011 172 aaKnown RBP10.42□□□□□ -0.74
AP3S2-216ENST00000617003 NMUP48645 174 aa10.41□□□□□ -0.74
AP3S2-216ENST00000617003 MRPL35Q9NZE8 188 aaKnown RBP10.41□□□□□ -0.74
AP3S2-216ENST00000617003 IGKV2-24A0A0C4DH68 120 aa10.4□□□□□ -0.74
AP3S2-216ENST00000617003 EPM2AB3EWF7 344 aa10.4□□□□□ -0.74
AP3S2-216ENST00000617003 F8WDY8 70 aa10.4□□□□□ -0.74
AP3S2-216ENST00000617003 C10orf25Q5T742 122 aa10.4□□□□□ -0.74
AP3S2-216ENST00000617003 UNQ6190/PRO20217Q6UXQ8 127 aa10.4□□□□□ -0.74
AP3S2-216ENST00000617003 IGLV5-45A0A087WSX0 123 aa10.39□□□□□ -0.75
AP3S2-216ENST00000617003 A0A096LNI7 61 aa10.39□□□□□ -0.75
AP3S2-216ENST00000617003 NDUFA1O15239 70 aa10.39□□□□□ -0.75
AP3S2-216ENST00000617003 RNF151Q2KHN1 245 aa10.39□□□□□ -0.75
AP3S2-216ENST00000617003 PCP2Q8IVA1 136 aa10.39□□□□□ -0.75
AP3S2-216ENST00000617003 SPACA4Q8TDM5 124 aa10.39□□□□□ -0.75
AP3S2-216ENST00000617003 TOMM7Q9P0U1 55 aa10.39□□□□□ -0.75
AP3S2-216ENST00000617003 Q5VSD8 79 aa10.39□□□□□ -0.75
AP3S2-216ENST00000617003 KRTAP3-3Q9BYR6 98 aa10.39□□□□□ -0.75
AP3S2-216ENST00000617003 KRTAP3-2Q9BYR7 98 aa10.39□□□□□ -0.75
AP3S2-216ENST00000617003 A0A087WYN8 130 aa10.38□□□□□ -0.75
AP3S2-216ENST00000617003 LOC107984640A0A0U1RRK4 108 aa10.38□□□□□ -0.75
AP3S2-216ENST00000617003 FAM229AH3BQW9 127 aa10.38□□□□□ -0.75
AP3S2-216ENST00000617003 H3BRM9 83 aa10.38□□□□□ -0.75
AP3S2-216ENST00000617003 PTTG1IPP53801 180 aa10.38□□□□□ -0.75
AP3S2-216ENST00000617003 TAL2Q16559 108 aa10.38□□□□□ -0.75
AP3S2-216ENST00000617003 C2orf82Q6UX34 121 aa10.38□□□□□ -0.75
AP3S2-216ENST00000617003 CHTOPQ9Y3Y2 248 aaKnown RBP10.38□□□□□ -0.75
AP3S2-216ENST00000617003 IGKV2D-26A0A0A0MRZ7 120 aa10.37□□□□□ -0.75
AP3S2-216ENST00000617003 PRSS2P07478 247 aa10.37□□□□□ -0.75
AP3S2-216ENST00000617003 GAGE2BQ13066 116 aa10.37□□□□□ -0.75
AP3S2-216ENST00000617003 C6orf226Q5I0X4 101 aa10.37□□□□□ -0.75
AP3S2-216ENST00000617003 C6orf48Q9UBA6 75 aa10.37□□□□□ -0.75
AP3S2-216ENST00000617003 PKIGQ9Y2B9 76 aa10.37□□□□□ -0.75
AP3S2-216ENST00000617003 SMIM1B2RUZ4 78 aa10.36□□□□□ -0.75
AP3S2-216ENST00000617003 Q8IZM0 81 aa10.36□□□□□ -0.75
AP3S2-216ENST00000617003 LINC00528Q8N1L1 170 aa10.36□□□□□ -0.75
AP3S2-216ENST00000617003 SPINK8P0C7L1 97 aa10.35□□□□□ -0.75
AP3S2-216ENST00000617003 PCLOQ9Y6V0 5065 aa10.35□□□□□ -0.75
AP3S2-216ENST00000617003 ZNF22P17026 224 aaPredicted RBP10.35□□□□□ -0.75
AP3S2-216ENST00000617003 VAMP3Q15836 100 aa10.35□□□□□ -0.75
AP3S2-216ENST00000617003 CKS1BP61024 79 aa10.34□□□□□ -0.75
AP3S2-216ENST00000617003 PLAC8Q9NZF1 115 aa10.34□□□□□ -0.75
AP3S2-216ENST00000617003 LINC00474Q9P2X8 69 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms