RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 TINCRA0A1B0GVN0 87 aa13.8□□□□□ -0.2
CBWD3-212ENST00000616550 PMVKQ15126 192 aa13.8□□□□□ -0.2
CBWD3-212ENST00000616550 HERC1Q15751 4861 aa13.8□□□□□ -0.2
CBWD3-212ENST00000616550 RAB5BP61020 215 aa13.78□□□□□ -0.2
CBWD3-212ENST00000616550 PKHD1L1Q86WI1 4243 aa13.78□□□□□ -0.2
CBWD3-212ENST00000616550 NDUFC2-KCTD14E9PQ53 114 aa13.77□□□□□ -0.21
CBWD3-212ENST00000616550 URB1-AS1Q96HZ7 61 aa13.76□□□□□ -0.21
CBWD3-212ENST00000616550 PHF5AQ7RTV0 110 aaKnown RBP13.75□□□□□ -0.21
CBWD3-212ENST00000616550 YPEL4Q96NS1 127 aa13.75□□□□□ -0.21
CBWD3-212ENST00000616550 IGLV5-45A0A087WSX0 123 aa13.74□□□□□ -0.21
CBWD3-212ENST00000616550 FAM168BA1KXE4 195 aa13.74□□□□□ -0.21
CBWD3-212ENST00000616550 HBDP02042 147 aa13.74□□□□□ -0.21
CBWD3-212ENST00000616550 NDUFA6P56556 154 aa13.74□□□□□ -0.21
CBWD3-212ENST00000616550 PDZD11Q5EBL8 140 aa13.74□□□□□ -0.21
CBWD3-212ENST00000616550 A0A096LNJ9 63 aa13.73□□□□□ -0.21
CBWD3-212ENST00000616550 SMIM1B2RUZ4 78 aa13.73□□□□□ -0.21
CBWD3-212ENST00000616550 CXCL5P42830 114 aa13.73□□□□□ -0.21
CBWD3-212ENST00000616550 FAM19A5Q7Z5A7 132 aaPredicted RBP13.73□□□□□ -0.21
CBWD3-212ENST00000616550 F8VRH5 84 aa13.72□□□□□ -0.21
CBWD3-212ENST00000616550 PMCHL1Q16048 86 aa13.72□□□□□ -0.21
CBWD3-212ENST00000616550 SPINK6Q6UWN8 80 aa13.72□□□□□ -0.21
CBWD3-212ENST00000616550 H3BRM9 83 aa13.71□□□□□ -0.21
CBWD3-212ENST00000616550 COX7B2Q8TF08 81 aa13.71□□□□□ -0.21
CBWD3-212ENST00000616550 PSORS1C2Q9UIG4 136 aa13.71□□□□□ -0.21
CBWD3-212ENST00000616550 LRP1Q07954 4544 aaKnown RBP13.71□□□□□ -0.22
CBWD3-212ENST00000616550 SPINK8P0C7L1 97 aa13.7□□□□□ -0.22
CBWD3-212ENST00000616550 ATP5LO75964 103 aa13.69□□□□□ -0.22
CBWD3-212ENST00000616550 CBLN2Q8IUK8 224 aa13.69□□□□□ -0.22
CBWD3-212ENST00000616550 IGLC3P0DOY3 106 aa13.68□□□□□ -0.22
CBWD3-212ENST00000616550 SRSF9Q13242 221 aaKnown RBP eCLIP13.68□□□□□ -0.22
CBWD3-212ENST00000616550 C9orf129Q5T035 196 aaKnown RBP13.68□□□□□ -0.22
CBWD3-212ENST00000616550 SLC7A5P1Q8MH63 180 aa13.68□□□□□ -0.22
CBWD3-212ENST00000616550 C1orf137Q5JT78 98 aa13.67□□□□□ -0.22
CBWD3-212ENST00000616550 SERTAD4-AS1Q5TG53 156 aa13.67□□□□□ -0.22
CBWD3-212ENST00000616550 M0QXV9 152 aa13.66□□□□□ -0.22
CBWD3-212ENST00000616550 CHCHD1Q96BP2 118 aaKnown RBP13.66□□□□□ -0.22
CBWD3-212ENST00000616550 REG3GQ6UW15 175 aa13.65□□□□□ -0.22
CBWD3-212ENST00000616550 KRTAP7-1Q8IUC3 87 aa13.65□□□□□ -0.22
CBWD3-212ENST00000616550 FAT3Q8TDW7 4589 aa13.64□□□□□ -0.23
CBWD3-212ENST00000616550 MT1HL1P0DM35 61 aa13.64□□□□□ -0.23
CBWD3-212ENST00000616550 BAGE3Q86Y29 109 aa13.64□□□□□ -0.23
CBWD3-212ENST00000616550 UBE2BP63146 152 aa13.63□□□□□ -0.23
CBWD3-212ENST00000616550 XAGE1AQ9HD64 81 aa13.63□□□□□ -0.23
CBWD3-212ENST00000616550 LINC01600Q96MT4 127 aa13.62□□□□□ -0.23
CBWD3-212ENST00000616550 ZNF22P17026 224 aaPredicted RBP13.61□□□□□ -0.23
CBWD3-212ENST00000616550 KRTAP11-1Q8IUC1 163 aa13.6□□□□□ -0.23
CBWD3-212ENST00000616550 IGLV5-39A0A0G2JS06 123 aa13.59□□□□□ -0.23
CBWD3-212ENST00000616550 TRGC2P03986 189 aa13.59□□□□□ -0.23
CBWD3-212ENST00000616550 IGLV7-43P04211 117 aa13.59□□□□□ -0.23
CBWD3-212ENST00000616550 C11orf86A6NJI1 115 aa13.58□□□□□ -0.24
CBWD3-212ENST00000616550 TMEM170BQ5T4T1 132 aa13.58□□□□□ -0.24
CBWD3-212ENST00000616550 IFI27L1Q96BM0 104 aa13.58□□□□□ -0.24
CBWD3-212ENST00000616550 CHTOPQ9Y3Y2 248 aaKnown RBP13.58□□□□□ -0.24
CBWD3-212ENST00000616550 C22orf24Q9Y442 160 aa13.58□□□□□ -0.24
CBWD3-212ENST00000616550 HSBP1O75506 76 aa13.57□□□□□ -0.24
CBWD3-212ENST00000616550 LBHQ53QV2 105 aaPredicted RBP13.56□□□□□ -0.24
CBWD3-212ENST00000616550 TRAV12-1A0A0B4J245 112 aa13.54□□□□□ -0.24
CBWD3-212ENST00000616550 FAM19A2Q8N3H0 131 aa13.54□□□□□ -0.24
CBWD3-212ENST00000616550 DIRC1Q969H9 104 aa13.54□□□□□ -0.24
CBWD3-212ENST00000616550 ODF1Q14990 250 aa13.53□□□□□ -0.24
CBWD3-212ENST00000616550 TP73-AS1Q9UF72 201 aa13.53□□□□□ -0.24
CBWD3-212ENST00000616550 PFN2P35080 140 aa13.52□□□□□ -0.25
CBWD3-212ENST00000616550 MRPL55Q7Z7F7 128 aaKnown RBP13.51□□□□□ -0.25
CBWD3-212ENST00000616550 COLCA2A8K830 154 aa13.5□□□□□ -0.25
CBWD3-212ENST00000616550 SFTA2Q6UW10 78 aa13.5□□□□□ -0.25
CBWD3-212ENST00000616550 PLA2G2DQ9UNK4 145 aa13.5□□□□□ -0.25
CBWD3-212ENST00000616550 KRTAP10-8P60410 259 aa13.49□□□□□ -0.25
CBWD3-212ENST00000616550 SERF1AO75920 110 aa13.48□□□□□ -0.25
CBWD3-212ENST00000616550 ZNF625Q96I27 306 aaPredicted RBP13.48□□□□□ -0.25
CBWD3-212ENST00000616550 ERG28Q9UKR5 140 aa13.48□□□□□ -0.25
CBWD3-212ENST00000616550 TMEM223A0PJW6 202 aa13.47□□□□□ -0.25
CBWD3-212ENST00000616550 H0Y9J4 135 aa13.47□□□□□ -0.25
CBWD3-212ENST00000616550 NUPR1O60356 82 aa13.47□□□□□ -0.25
CBWD3-212ENST00000616550 COX17Q14061 63 aa13.47□□□□□ -0.25
CBWD3-212ENST00000616550 LEPROTL1O95214 131 aa13.46□□□□□ -0.25
CBWD3-212ENST00000616550 NKAPP1Q8N9T2 125 aa13.46□□□□□ -0.25
CBWD3-212ENST00000616550 H0Y8G0 127 aa13.45□□□□□ -0.26
CBWD3-212ENST00000616550 LINC00167Q96N53 147 aa13.45□□□□□ -0.26
CBWD3-212ENST00000616550 IGLV5-37A0A075B6J1 123 aa13.44□□□□□ -0.26
CBWD3-212ENST00000616550 LINC00310P59036 64 aa13.44□□□□□ -0.26
CBWD3-212ENST00000616550 RPL37AP8A6NKH3 93 aa13.43□□□□□ -0.26
CBWD3-212ENST00000616550 SND1-IT1Q9HBX3 110 aa13.43□□□□□ -0.26
CBWD3-212ENST00000616550 GAGE10A6NGK3 116 aa13.42□□□□□ -0.26
CBWD3-212ENST00000616550 ZNF861PO60384 105 aa13.42□□□□□ -0.26
CBWD3-212ENST00000616550 HSPB8Q9UJY1 196 aa13.42□□□□□ -0.26
CBWD3-212ENST00000616550 LINC00158P58513 81 aa13.4□□□□□ -0.26
CBWD3-212ENST00000616550 FABP4P15090 132 aa13.39□□□□□ -0.27
CBWD3-212ENST00000616550 TNXBP22105 4242 aa13.39□□□□□ -0.27
CBWD3-212ENST00000616550 BCE1O60756 84 aa13.38□□□□□ -0.27
CBWD3-212ENST00000616550 RPL24P83731 157 aaKnown RBP13.38□□□□□ -0.27
CBWD3-212ENST00000616550 SCO1O75880 301 aa13.37□□□□□ -0.27
CBWD3-212ENST00000616550 VPREB1P12018 145 aa13.36□□□□□ -0.27
CBWD3-212ENST00000616550 RPL28P46779 137 aaKnown RBP13.36□□□□□ -0.27
CBWD3-212ENST00000616550 PRR26Q8N8Z3 221 aa13.36□□□□□ -0.27
CBWD3-212ENST00000616550 ATP6V1G1O75348 118 aa13.35□□□□□ -0.27
CBWD3-212ENST00000616550 PLNP26678 52 aa13.35□□□□□ -0.27
CBWD3-212ENST00000616550 A0A0U1RRA0 63 aa13.34□□□□□ -0.27
CBWD3-212ENST00000616550 HERV-K104P63124 156 aa13.34□□□□□ -0.27
CBWD3-212ENST00000616550 IGLV1-50A0A075B6I6 118 aa13.33□□□□□ -0.28
CBWD3-212ENST00000616550 IGKV2-28A0A075B6P5 120 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms