RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 TINCRA0A1B0GVN0 87 aa10.59□□□□□ -0.71
LHX1-202ENST00000616237 J3QL48 77 aa10.59□□□□□ -0.71
LHX1-202ENST00000616237 PMVKQ15126 192 aa10.59□□□□□ -0.71
LHX1-202ENST00000616237 IGLV5-45A0A087WSX0 123 aa10.58□□□□□ -0.72
LHX1-202ENST00000616237 TRBV30A0A0K0K1B3 111 aa10.58□□□□□ -0.72
LHX1-202ENST00000616237 Q8IZM0 81 aa10.58□□□□□ -0.72
LHX1-202ENST00000616237 LINC00469Q8N7U9 141 aa10.58□□□□□ -0.72
LHX1-202ENST00000616237 FAM168BA1KXE4 195 aa10.57□□□□□ -0.72
LHX1-202ENST00000616237 SMIM1B2RUZ4 78 aa10.57□□□□□ -0.72
LHX1-202ENST00000616237 PACRGQ96M98 296 aaPredicted RBP10.57□□□□□ -0.72
LHX1-202ENST00000616237 OXTP01178 125 aa10.56□□□□□ -0.72
LHX1-202ENST00000616237 HBDP02042 147 aa10.56□□□□□ -0.72
LHX1-202ENST00000616237 PRSS2P07478 247 aa10.56□□□□□ -0.72
LHX1-202ENST00000616237 GAGE2EQ4V326 116 aa10.56□□□□□ -0.72
LHX1-202ENST00000616237 PDZD11Q5EBL8 140 aa10.56□□□□□ -0.72
LHX1-202ENST00000616237 C6orf226Q5I0X4 101 aa10.56□□□□□ -0.72
LHX1-202ENST00000616237 KRTAP7-1Q8IUC3 87 aa10.56□□□□□ -0.72
LHX1-202ENST00000616237 GAGE2DQ9UEU5 116 aa10.56□□□□□ -0.72
LHX1-202ENST00000616237 PHF5AQ7RTV0 110 aaKnown RBP10.55□□□□□ -0.72
LHX1-202ENST00000616237 NDUFC2-KCTD14E9PQ53 114 aa10.54□□□□□ -0.72
LHX1-202ENST00000616237 RAB5BP61020 215 aa10.54□□□□□ -0.72
LHX1-202ENST00000616237 CKS1BP61024 79 aa10.54□□□□□ -0.72
LHX1-202ENST00000616237 SPINK8P0C7L1 97 aa10.53□□□□□ -0.72
LHX1-202ENST00000616237 IGLC3P0DOY3 106 aa10.52□□□□□ -0.72
LHX1-202ENST00000616237 C9orf129Q5T035 196 aaKnown RBP10.52□□□□□ -0.72
LHX1-202ENST00000616237 NDUFA6P56556 154 aa10.52□□□□□ -0.73
LHX1-202ENST00000616237 KRTAP11-1Q8IUC1 163 aa10.52□□□□□ -0.73
LHX1-202ENST00000616237 F8VRH5 84 aa10.51□□□□□ -0.73
LHX1-202ENST00000616237 TRGC2P03986 189 aa10.51□□□□□ -0.73
LHX1-202ENST00000616237 FAM19A5Q7Z5A7 132 aaPredicted RBP10.51□□□□□ -0.73
LHX1-202ENST00000616237 COX7B2Q8TF08 81 aa10.51□□□□□ -0.73
LHX1-202ENST00000616237 PSORS1C2Q9UIG4 136 aa10.51□□□□□ -0.73
LHX1-202ENST00000616237 TNXBP22105 4242 aa10.5□□□□□ -0.73
LHX1-202ENST00000616237 ATP5LO75964 103 aa10.5□□□□□ -0.73
LHX1-202ENST00000616237 MT1HL1P0DM35 61 aa10.5□□□□□ -0.73
LHX1-202ENST00000616237 SRSF9Q13242 221 aaKnown RBP eCLIP10.5□□□□□ -0.73
LHX1-202ENST00000616237 CHCHD1Q96BP2 118 aaKnown RBP10.5□□□□□ -0.73
LHX1-202ENST00000616237 ZNF22P17026 224 aaPredicted RBP10.49□□□□□ -0.73
LHX1-202ENST00000616237 CXCL5P42830 114 aa10.49□□□□□ -0.73
LHX1-202ENST00000616237 BAGE3Q86Y29 109 aa10.48□□□□□ -0.73
LHX1-202ENST00000616237 IGLV5-39A0A0G2JS06 123 aa10.47□□□□□ -0.73
LHX1-202ENST00000616237 C11orf86A6NJI1 115 aa10.47□□□□□ -0.73
LHX1-202ENST00000616237 COLCA2A8K830 154 aa10.47□□□□□ -0.73
LHX1-202ENST00000616237 XAGE1AQ9HD64 81 aa10.47□□□□□ -0.73
LHX1-202ENST00000616237 H3BRM9 83 aa10.46□□□□□ -0.74
LHX1-202ENST00000616237 LINC00310P59036 64 aa10.46□□□□□ -0.74
LHX1-202ENST00000616237 SERTAD4-AS1Q5TG53 156 aa10.46□□□□□ -0.74
LHX1-202ENST00000616237 M0QXV9 152 aa10.45□□□□□ -0.74
LHX1-202ENST00000616237 SPINK6Q6UWN8 80 aa10.45□□□□□ -0.74
LHX1-202ENST00000616237 FAM19A2Q8N3H0 131 aa10.45□□□□□ -0.74
LHX1-202ENST00000616237 C1orf137Q5JT78 98 aa10.44□□□□□ -0.74
LHX1-202ENST00000616237 IFI27L1Q96BM0 104 aa10.44□□□□□ -0.74
LHX1-202ENST00000616237 CHTOPQ9Y3Y2 248 aaKnown RBP10.43□□□□□ -0.74
LHX1-202ENST00000616237 HSBP1O75506 76 aa10.42□□□□□ -0.74
LHX1-202ENST00000616237 TRAV12-1A0A0B4J245 112 aa10.41□□□□□ -0.74
LHX1-202ENST00000616237 NUPR1O60356 82 aa10.41□□□□□ -0.74
LHX1-202ENST00000616237 SCO1O75880 301 aa10.4□□□□□ -0.74
LHX1-202ENST00000616237 SERF1AO75920 110 aa10.4□□□□□ -0.74
LHX1-202ENST00000616237 TMEM170BQ5T4T1 132 aa10.4□□□□□ -0.74
LHX1-202ENST00000616237 LINC01600Q96MT4 127 aa10.4□□□□□ -0.74
LHX1-202ENST00000616237 C22orf24Q9Y442 160 aa10.4□□□□□ -0.74
LHX1-202ENST00000616237 IGLV7-43P04211 117 aa10.39□□□□□ -0.75
LHX1-202ENST00000616237 HMCN2Q8NDA2 5059 aa10.39□□□□□ -0.75
LHX1-202ENST00000616237 UBE2BP63146 152 aa10.38□□□□□ -0.75
LHX1-202ENST00000616237 TMEM223A0PJW6 202 aa10.37□□□□□ -0.75
LHX1-202ENST00000616237 PFN2P35080 140 aa10.36□□□□□ -0.75
LHX1-202ENST00000616237 ZNF625Q96I27 306 aaPredicted RBP10.36□□□□□ -0.75
LHX1-202ENST00000616237 LEPROTL1O95214 131 aa10.35□□□□□ -0.75
LHX1-202ENST00000616237 ODF1Q14990 250 aa10.35□□□□□ -0.75
LHX1-202ENST00000616237 REG3GQ6UW15 175 aa10.35□□□□□ -0.75
LHX1-202ENST00000616237 PLA2G2DQ9UNK4 145 aa10.35□□□□□ -0.75
LHX1-202ENST00000616237 KRTAP10-8P60410 259 aa10.34□□□□□ -0.75
LHX1-202ENST00000616237 MRPL55Q7Z7F7 128 aaKnown RBP10.34□□□□□ -0.75
LHX1-202ENST00000616237 TP73-AS1Q9UF72 201 aa10.34□□□□□ -0.75
LHX1-202ENST00000616237 ERG28Q9UKR5 140 aa10.34□□□□□ -0.75
LHX1-202ENST00000616237 H0Y8G0 127 aa10.33□□□□□ -0.76
LHX1-202ENST00000616237 IGLV5-37A0A075B6J1 123 aa10.32□□□□□ -0.76
LHX1-202ENST00000616237 LBHQ53QV2 105 aaPredicted RBP10.32□□□□□ -0.76
LHX1-202ENST00000616237 LINC00167Q96N53 147 aa10.32□□□□□ -0.76
LHX1-202ENST00000616237 FABP4P15090 132 aa10.31□□□□□ -0.76
LHX1-202ENST00000616237 SND1-IT1Q9HBX3 110 aa10.31□□□□□ -0.76
LHX1-202ENST00000616237 HIST1H2BKO60814 126 aa10.3□□□□□ -0.76
LHX1-202ENST00000616237 HIST1H2BJP06899 126 aa10.3□□□□□ -0.76
LHX1-202ENST00000616237 HIST1H2BOP23527 126 aa10.3□□□□□ -0.76
LHX1-202ENST00000616237 HIST1H2BBP33778 126 aa10.3□□□□□ -0.76
LHX1-202ENST00000616237 HIST1H2BDP58876 126 aa10.3□□□□□ -0.76
LHX1-202ENST00000616237 HIST1H2BCP62807 126 aa10.3□□□□□ -0.76
LHX1-202ENST00000616237 COX17Q14061 63 aa10.3□□□□□ -0.76
LHX1-202ENST00000616237 HIST2H2BEQ16778 126 aa10.3□□□□□ -0.76
LHX1-202ENST00000616237 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.3□□□□□ -0.76
LHX1-202ENST00000616237 HIST1H2BHQ93079 126 aa10.3□□□□□ -0.76
LHX1-202ENST00000616237 HIST1H2BNQ99877 126 aa10.3□□□□□ -0.76
LHX1-202ENST00000616237 HIST1H2BMQ99879 126 aa10.3□□□□□ -0.76
LHX1-202ENST00000616237 RPL37AP8A6NKH3 93 aa10.29□□□□□ -0.76
LHX1-202ENST00000616237 H0Y9J4 135 aa10.29□□□□□ -0.76
LHX1-202ENST00000616237 SFTA2Q6UW10 78 aa10.29□□□□□ -0.76
LHX1-202ENST00000616237 Q8NDZ9 215 aa10.29□□□□□ -0.76
LHX1-202ENST00000616237 DIRC1Q969H9 104 aa10.29□□□□□ -0.76
LHX1-202ENST00000616237 GAGE10A6NGK3 116 aa10.28□□□□□ -0.76
LHX1-202ENST00000616237 HSPB8Q9UJY1 196 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms