RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 SLURP1P55000 103 aa6.79□□□□□ -1.32
COL12A1-211ENST00000615798 LOC101927531A0A1B0GV80 90 aa6.79□□□□□ -1.32
COL12A1-211ENST00000615798 CSNK1G2-AS1Q8NCQ2 148 aa6.78□□□□□ -1.32
COL12A1-211ENST00000615798 LINC00474Q9P2X8 69 aa6.78□□□□□ -1.32
COL12A1-211ENST00000615798 Q8IZM0 81 aa6.78□□□□□ -1.32
COL12A1-211ENST00000615798 COL4A2P08572 1712 aa6.78□□□□□ -1.32
COL12A1-211ENST00000615798 M0QY20 66 aa6.78□□□□□ -1.32
COL12A1-211ENST00000615798 MIR22HGQ0VDD5 57 aa6.77□□□□□ -1.33
COL12A1-211ENST00000615798 IGLV4-69A0A075B6H9 119 aa6.77□□□□□ -1.33
COL12A1-211ENST00000615798 BRI3O95415 125 aa6.77□□□□□ -1.33
COL12A1-211ENST00000615798 IGLV8-61A0A075B6I0 122 aa6.77□□□□□ -1.33
COL12A1-211ENST00000615798 LINC00336Q6ZUF6 198 aa6.77□□□□□ -1.33
COL12A1-211ENST00000615798 Q8N7P7 452 aa6.77□□□□□ -1.33
COL12A1-211ENST00000615798 IGKV2D-30A0A075B6S6 120 aa6.77□□□□□ -1.33
COL12A1-211ENST00000615798 IGKV2-30P06310 120 aa6.77□□□□□ -1.33
COL12A1-211ENST00000615798 TSHBP01222 138 aa6.77□□□□□ -1.33
COL12A1-211ENST00000615798 SMIM29Q86T20 159 aa6.77□□□□□ -1.33
COL12A1-211ENST00000615798 TRAV22A0A0B4J277 110 aa6.77□□□□□ -1.33
COL12A1-211ENST00000615798 TM2D3Q9BRN9 247 aa6.76□□□□□ -1.33
COL12A1-211ENST00000615798 PRO3102Q9H379 93 aa6.76□□□□□ -1.33
COL12A1-211ENST00000615798 ZNF580Q9UK33 172 aa6.76□□□□□ -1.33
COL12A1-211ENST00000615798 E7EUB6 86 aa6.76□□□□□ -1.33
COL12A1-211ENST00000615798 MSMPQ1L6U9 139 aa6.76□□□□□ -1.33
COL12A1-211ENST00000615798 SPRNQ5BIV9 151 aa6.76□□□□□ -1.33
COL12A1-211ENST00000615798 LY6HO94772 140 aa6.76□□□□□ -1.33
COL12A1-211ENST00000615798 NOTCH2Q04721 2471 aa6.76□□□□□ -1.33
COL12A1-211ENST00000615798 CYSRT1A8MQ03 144 aa6.76□□□□□ -1.33
COL12A1-211ENST00000615798 NHLRC4P0CG21 123 aaPredicted RBP6.76□□□□□ -1.33
COL12A1-211ENST00000615798 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.75□□□□□ -1.33
COL12A1-211ENST00000615798 A0A1W2PNU3 283 aaPredicted RBP6.75□□□□□ -1.33
COL12A1-211ENST00000615798 REG3GQ6UW15 175 aa6.74□□□□□ -1.33
COL12A1-211ENST00000615798 RPL37AP8A6NKH3 93 aa6.74□□□□□ -1.33
COL12A1-211ENST00000615798 CIRBP-AS1Q8TBR5 109 aa6.74□□□□□ -1.33
COL12A1-211ENST00000615798 LINC01600Q96MT4 127 aa6.74□□□□□ -1.33
COL12A1-211ENST00000615798 IGLV2-11P01706 119 aa6.74□□□□□ -1.33
COL12A1-211ENST00000615798 A8MUN3 132 aa6.74□□□□□ -1.33
COL12A1-211ENST00000615798 RITA1Q96K30 269 aa6.74□□□□□ -1.33
COL12A1-211ENST00000615798 EP400Q96L91 3159 aa6.73□□□□□ -1.33
COL12A1-211ENST00000615798 A0A1B0GW54 56 aa6.73□□□□□ -1.33
COL12A1-211ENST00000615798 DEFB135Q30KP9 77 aa6.73□□□□□ -1.33
COL12A1-211ENST00000615798 RNF223E7ERA6 249 aa6.72□□□□□ -1.33
COL12A1-211ENST00000615798 RBM12B-AS1Q9P1G2 102 aa6.72□□□□□ -1.33
COL12A1-211ENST00000615798 ADORA2A-AS1P86434 159 aa6.71□□□□□ -1.33
COL12A1-211ENST00000615798 MRGPRG-AS1Q2M3A8 158 aa6.71□□□□□ -1.33
COL12A1-211ENST00000615798 KPRPQ5T749 579 aaPredicted RBP6.71□□□□□ -1.34
COL12A1-211ENST00000615798 COA5Q86WW8 74 aa6.71□□□□□ -1.34
COL12A1-211ENST00000615798 FSHBP01225 129 aa6.7□□□□□ -1.34
COL12A1-211ENST00000615798 Q8NA96 180 aa6.69□□□□□ -1.34
COL12A1-211ENST00000615798 MUC6Q6W4X9 2439 aa6.69□□□□□ -1.34
COL12A1-211ENST00000615798 Q96MF0 132 aa6.69□□□□□ -1.34
COL12A1-211ENST00000615798 C11orf45Q8TAV5 145 aa6.69□□□□□ -1.34
COL12A1-211ENST00000615798 Q6ZTI0 123 aa6.68□□□□□ -1.34
COL12A1-211ENST00000615798 A0A087WSZ3 146 aa6.68□□□□□ -1.34
COL12A1-211ENST00000615798 LINC00959A0A1B0GUT2 108 aa6.68□□□□□ -1.34
COL12A1-211ENST00000615798 ABCA12Q86UK0 2595 aa6.68□□□□□ -1.34
COL12A1-211ENST00000615798 LMO4P61968 165 aa6.68□□□□□ -1.34
COL12A1-211ENST00000615798 CDC42SE1Q9NRR8 79 aa6.68□□□□□ -1.34
COL12A1-211ENST00000615798 ZFP36P26651 326 aaKnown RBP6.68□□□□□ -1.34
COL12A1-211ENST00000615798 ZFHX2Q9C0A1 2572 aaPredicted RBP6.68□□□□□ -1.34
COL12A1-211ENST00000615798 C11orf71Q6IPW1 123 aa6.67□□□□□ -1.34
COL12A1-211ENST00000615798 KLLNB2CW77 178 aa6.67□□□□□ -1.34
COL12A1-211ENST00000615798 K7EQG2 157 aa6.67□□□□□ -1.34
COL12A1-211ENST00000615798 DEFB4AO15263 64 aa6.67□□□□□ -1.34
COL12A1-211ENST00000615798 DEFB116Q30KQ4 102 aa6.67□□□□□ -1.34
COL12A1-211ENST00000615798 DEFB113Q30KQ7 82 aa6.67□□□□□ -1.34
COL12A1-211ENST00000615798 C1orf229Q6ZS94 237 aaPredicted RBP6.67□□□□□ -1.34
COL12A1-211ENST00000615798 MAP6D1Q9H9H5 199 aa6.67□□□□□ -1.34
COL12A1-211ENST00000615798 FHL2Q14192 279 aa6.67□□□□□ -1.34
COL12A1-211ENST00000615798 LELP1Q5T871 98 aa6.67□□□□□ -1.34
COL12A1-211ENST00000615798 CAMK2N1Q7Z7J9 78 aa6.67□□□□□ -1.34
COL12A1-211ENST00000615798 EGFEM1PQ0D2K5 195 aa6.67□□□□□ -1.34
COL12A1-211ENST00000615798 LINC00482Q8N8I6 264 aa6.66□□□□□ -1.34
COL12A1-211ENST00000615798 C8orf17Q9NRJ1 99 aa6.66□□□□□ -1.34
COL12A1-211ENST00000615798 CRIP1P50238 77 aa6.65□□□□□ -1.34
COL12A1-211ENST00000615798 IGIPA6NJ69 53 aa6.65□□□□□ -1.34
COL12A1-211ENST00000615798 PSMG3-AS1Q96PY0 264 aa6.65□□□□□ -1.34
COL12A1-211ENST00000615798 DEFB1P60022 68 aa6.65□□□□□ -1.34
COL12A1-211ENST00000615798 UNQ9165/PRO28630Q6UXU0 137 aa6.65□□□□□ -1.35
COL12A1-211ENST00000615798 LOC110117498A0A087WWA1 95 aa6.65□□□□□ -1.35
COL12A1-211ENST00000615798 LINC01548A6NM66 108 aa6.64□□□□□ -1.35
COL12A1-211ENST00000615798 SPATA3Q8NHX4 192 aa6.64□□□□□ -1.35
COL12A1-211ENST00000615798 SPTBN4Q9H254 2564 aa6.64□□□□□ -1.35
COL12A1-211ENST00000615798 LINC00310P59036 64 aa6.64□□□□□ -1.35
COL12A1-211ENST00000615798 EPM2AB3EWF7 344 aa6.64□□□□□ -1.35
COL12A1-211ENST00000615798 C11orf72Q8NBR9 251 aa6.64□□□□□ -1.35
COL12A1-211ENST00000615798 GRNP28799 593 aaKnown RBP6.64□□□□□ -1.35
COL12A1-211ENST00000615798 LINC01546A6NGU7 62 aa6.63□□□□□ -1.35
COL12A1-211ENST00000615798 POLR2KP53803 58 aaKnown RBP6.63□□□□□ -1.35
COL12A1-211ENST00000615798 WISP2O76076 250 aa6.63□□□□□ -1.35
COL12A1-211ENST00000615798 SETD2Q9BYW2 2564 aaPredicted RBP6.63□□□□□ -1.35
COL12A1-211ENST00000615798 CDC42SE2Q9NRR3 84 aa6.63□□□□□ -1.35
COL12A1-211ENST00000615798 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.63□□□□□ -1.35
COL12A1-211ENST00000615798 APLNQ9ULZ1 77 aa6.63□□□□□ -1.35
COL12A1-211ENST00000615798 MTORP42345 2549 aa6.63□□□□□ -1.35
COL12A1-211ENST00000615798 ADAMTSL4-AS1Q5T5F5 129 aa6.62□□□□□ -1.35
COL12A1-211ENST00000615798 Q1T7F1 81 aa6.62□□□□□ -1.35
COL12A1-211ENST00000615798 C2orf48Q96LS8 159 aa6.62□□□□□ -1.35
COL12A1-211ENST00000615798 IGLV1-40P01703 118 aa6.62□□□□□ -1.35
COL12A1-211ENST00000615798 PLA2G2DQ9UNK4 145 aa6.62□□□□□ -1.35
COL12A1-211ENST00000615798 TSPEAR-AS2P59090 65 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms