RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 FAM19A2Q8N3H0 131 aa3.64□□□□□ -1.83
MUC1-227ENST00000615517 C11orf52Q96A22 123 aa3.64□□□□□ -1.83
MUC1-227ENST00000615517 KRTAP9-3Q9BYQ3 159 aa3.64□□□□□ -1.83
MUC1-227ENST00000615517 BORCS7-ASMTA0A0B4J1R7 106 aa3.63□□□□□ -1.83
MUC1-227ENST00000615517 SLC25A20O43772 301 aa3.63□□□□□ -1.83
MUC1-227ENST00000615517 RAB4AP20338 218 aa3.63□□□□□ -1.83
MUC1-227ENST00000615517 RPS29P62273 56 aaKnown RBP3.63□□□□□ -1.83
MUC1-227ENST00000615517 HBBP68871 147 aa3.63□□□□□ -1.83
MUC1-227ENST00000615517 KRTAP19-6Q3LI70 58 aa3.63□□□□□ -1.83
MUC1-227ENST00000615517 CBLN2Q8IUK8 224 aa3.63□□□□□ -1.83
MUC1-227ENST00000615517 KCNRGQ8N5I3 272 aa3.63□□□□□ -1.83
MUC1-227ENST00000615517 ENKURQ8TC29 256 aa3.63□□□□□ -1.83
MUC1-227ENST00000615517 SFT2D1Q8WV19 159 aa3.63□□□□□ -1.83
MUC1-227ENST00000615517 MBD3L1Q8WWY6 194 aa3.63□□□□□ -1.83
MUC1-227ENST00000615517 TMEM126AQ9H061 195 aa3.63□□□□□ -1.83
MUC1-227ENST00000615517 C9orf92A6NGG3 77 aa3.62□□□□□ -1.83
MUC1-227ENST00000615517 M0R378 163 aa3.62□□□□□ -1.83
MUC1-227ENST00000615517 MT2AP02795 61 aa3.62□□□□□ -1.83
MUC1-227ENST00000615517 GNG4P50150 75 aa3.62□□□□□ -1.83
MUC1-227ENST00000615517 CKS1BP61024 79 aa3.62□□□□□ -1.83
MUC1-227ENST00000615517 SUMO2P61956 95 aaKnown RBP3.62□□□□□ -1.83
MUC1-227ENST00000615517 CCL20P78556 96 aa3.62□□□□□ -1.83
MUC1-227ENST00000615517 MRPS36P82909 103 aaKnown RBP3.62□□□□□ -1.83
MUC1-227ENST00000615517 LCE5AQ5TCM9 118 aa3.62□□□□□ -1.83
MUC1-227ENST00000615517 NRACQ8N912 160 aa3.62□□□□□ -1.83
MUC1-227ENST00000615517 SMIM12Q96EX1 92 aa3.62□□□□□ -1.83
MUC1-227ENST00000615517 KRTAP4-11Q9BYQ6 195 aa3.62□□□□□ -1.83
MUC1-227ENST00000615517 TOMM7Q9P0U1 55 aa3.62□□□□□ -1.83
MUC1-227ENST00000615517 AMN1Q8IY45 258 aa3.61□□□□□ -1.83
MUC1-227ENST00000615517 LINC01561Q8N1V8 128 aa3.61□□□□□ -1.83
MUC1-227ENST00000615517 TMEM18Q96B42 140 aa3.61□□□□□ -1.83
MUC1-227ENST00000615517 HIGD2AQ9BW72 106 aa3.61□□□□□ -1.83
MUC1-227ENST00000615517 GNB1LQ9BYB4 327 aa3.61□□□□□ -1.83
MUC1-227ENST00000615517 K7EN84 100 aa3.6□□□□□ -1.83
MUC1-227ENST00000615517 MT1FP04733 61 aa3.6□□□□□ -1.83
MUC1-227ENST00000615517 PRSS2P07478 247 aa3.6□□□□□ -1.83
MUC1-227ENST00000615517 IFITM3Q01628 133 aa3.6□□□□□ -1.83
MUC1-227ENST00000615517 C6orf226Q5I0X4 101 aa3.6□□□□□ -1.83
MUC1-227ENST00000615517 Q8IZM0 81 aa3.6□□□□□ -1.83
MUC1-227ENST00000615517 NKAPP1Q8N9T2 125 aa3.6□□□□□ -1.83
MUC1-227ENST00000615517 FAM213BQ8TBF2 198 aa3.6□□□□□ -1.83
MUC1-227ENST00000615517 TMEM191AQ9H0A3 160 aa3.6□□□□□ -1.83
MUC1-227ENST00000615517 SPANXA1Q9NS26 97 aa3.6□□□□□ -1.83
MUC1-227ENST00000615517 F8VRH5 84 aa3.59□□□□□ -1.83
MUC1-227ENST00000615517 BIN3Q9NQY0 253 aa3.59□□□□□ -1.83
MUC1-227ENST00000615517 ZC2HC1BQ5TFG8 222 aa3.58□□□□□ -1.84
MUC1-227ENST00000615517 Q6ZN92 141 aa3.58□□□□□ -1.84
MUC1-227ENST00000615517 ALKBH7Q9BT30 221 aaPredicted RBP3.58□□□□□ -1.84
MUC1-227ENST00000615517 GNG13Q9P2W3 67 aa3.58□□□□□ -1.84
MUC1-227ENST00000615517 IGLV4-3A0A075B6K6 122 aa3.57□□□□□ -1.84
MUC1-227ENST00000615517 FXYD6-FXYD2A0A087WZ82 144 aa3.57□□□□□ -1.84
MUC1-227ENST00000615517 A4D1N5 150 aa3.57□□□□□ -1.84
MUC1-227ENST00000615517 MOBPQ13875 183 aa3.57□□□□□ -1.84
MUC1-227ENST00000615517 Q6Q795 121 aa3.57□□□□□ -1.84
MUC1-227ENST00000615517 OCC1Q8TAD7 63 aa3.57□□□□□ -1.84
MUC1-227ENST00000615517 LINC00846Q9NV44 126 aa3.57□□□□□ -1.84
MUC1-227ENST00000615517 ZNF706Q9Y5V0 76 aaPredicted RBP3.57□□□□□ -1.84
MUC1-227ENST00000615517 IGLV9-49A0A0B4J1Y8 123 aa3.56□□□□□ -1.84
MUC1-227ENST00000615517 PRYO14603 147 aa3.56□□□□□ -1.84
MUC1-227ENST00000615517 PPP1R2P9O14990 202 aa3.56□□□□□ -1.84
MUC1-227ENST00000615517 VPREB1P12018 145 aa3.56□□□□□ -1.84
MUC1-227ENST00000615517 RAB5BP61020 215 aa3.56□□□□□ -1.84
MUC1-227ENST00000615517 LINC00483Q53H64 154 aa3.56□□□□□ -1.84
MUC1-227ENST00000615517 SSBP3-AS1Q7Z2R9 100 aa3.56□□□□□ -1.84
MUC1-227ENST00000615517 Q8NDZ9 215 aa3.56□□□□□ -1.84
MUC1-227ENST00000615517 GEMIN7Q9H840 131 aaKnown RBP3.56□□□□□ -1.84
MUC1-227ENST00000615517 MANBALQ9NQG1 85 aa3.56□□□□□ -1.84
MUC1-227ENST00000615517 MED9Q9NWA0 146 aa3.56□□□□□ -1.84
MUC1-227ENST00000615517 A0A1B0GUT8 65 aa3.55□□□□□ -1.84
MUC1-227ENST00000615517 TCAPO15273 167 aa3.55□□□□□ -1.84
MUC1-227ENST00000615517 GATCO43716 136 aaKnown RBP3.55□□□□□ -1.84
MUC1-227ENST00000615517 PPP1R17O96001 155 aa3.55□□□□□ -1.84
MUC1-227ENST00000615517 RPL37P61927 97 aaKnown RBP3.55□□□□□ -1.84
MUC1-227ENST00000615517 EIF5A2Q9GZV4 153 aaKnown RBP3.55□□□□□ -1.84
MUC1-227ENST00000615517 PYGO1Q9Y3Y4 419 aa3.55□□□□□ -1.84
MUC1-227ENST00000615517 TRBV24-1A0A075B6N3 115 aa3.54□□□□□ -1.84
MUC1-227ENST00000615517 A8MWL6 223 aa3.54□□□□□ -1.84
MUC1-227ENST00000615517 UMAD1C9J7I0 102 aa3.54□□□□□ -1.84
MUC1-227ENST00000615517 IGLV6-57P01721 117 aa3.54□□□□□ -1.84
MUC1-227ENST00000615517 GIPP09681 153 aaPredicted RBP3.54□□□□□ -1.84
MUC1-227ENST00000615517 IFI27P40305 119 aaPredicted RBP3.54□□□□□ -1.84
MUC1-227ENST00000615517 MRPL51Q4U2R6 128 aaKnown RBP3.54□□□□□ -1.84
MUC1-227ENST00000615517 FAM231DQ6ZW35 169 aa3.54□□□□□ -1.84
MUC1-227ENST00000615517 LINC01551Q86U37 167 aa3.54□□□□□ -1.84
MUC1-227ENST00000615517 SMCR5Q8TEV8 140 aa3.54□□□□□ -1.84
MUC1-227ENST00000615517 TMEM141Q96I45 108 aa3.54□□□□□ -1.84
MUC1-227ENST00000615517 C20orf78Q9BR46 151 aa3.54□□□□□ -1.84
MUC1-227ENST00000615517 SMIM2Q9BVW6 85 aa3.54□□□□□ -1.84
MUC1-227ENST00000615517 HIGD1CA8MV81 97 aa3.53□□□□□ -1.84
MUC1-227ENST00000615517 PDE6DO43924 150 aa3.53□□□□□ -1.84
MUC1-227ENST00000615517 CXCL5P42830 114 aa3.53□□□□□ -1.84
MUC1-227ENST00000615517 GAGE2AQ6NT46 116 aa3.53□□□□□ -1.84
MUC1-227ENST00000615517 TEX43Q6ZNM6 134 aa3.53□□□□□ -1.84
MUC1-227ENST00000615517 FAM19A3Q7Z5A8 133 aa3.53□□□□□ -1.84
MUC1-227ENST00000615517 BORCS7Q96B45 105 aa3.53□□□□□ -1.84
MUC1-227ENST00000615517 AMELXQ99217 191 aa3.53□□□□□ -1.84
MUC1-227ENST00000615517 CDKN2A-AS1Q9UH64 79 aa3.53□□□□□ -1.84
MUC1-227ENST00000615517 NPSP0C0P6 89 aa3.52□□□□□ -1.85
MUC1-227ENST00000615517 KRTAP10-10P60014 251 aa3.52□□□□□ -1.85
MUC1-227ENST00000615517 KRTAP3-1Q9BYR8 98 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms