RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 LINC01561Q8N1V8 128 aa9.34□□□□□ -0.91
FOXN3-219ENST00000615335 WFDC10AQ9H1F0 79 aa9.33□□□□□ -0.92
FOXN3-219ENST00000615335 IGKV3D-7A0A0C4DH55 119 aa9.33□□□□□ -0.92
FOXN3-219ENST00000615335 VSIG2Q96IQ7 327 aa9.33□□□□□ -0.92
FOXN3-219ENST00000615335 C22orf24Q9Y442 160 aa9.33□□□□□ -0.92
FOXN3-219ENST00000615335 STHQ8IWL8 128 aa9.32□□□□□ -0.92
FOXN3-219ENST00000615335 RBMY1BA6NDE4 496 aaKnown RBP9.32□□□□□ -0.92
FOXN3-219ENST00000615335 RBMY1EA6NEQ0 496 aaKnown RBP9.32□□□□□ -0.92
FOXN3-219ENST00000615335 RBMY1DP0C7P1 496 aaKnown RBP9.32□□□□□ -0.92
FOXN3-219ENST00000615335 RBMY1A1P0DJD3 496 aaKnown RBP9.32□□□□□ -0.92
FOXN3-219ENST00000615335 RBMY1CP0DJD4 496 aa9.32□□□□□ -0.92
FOXN3-219ENST00000615335 CIRBPQ14011 172 aaKnown RBP9.32□□□□□ -0.92
FOXN3-219ENST00000615335 RBMY1FQ15415 496 aaKnown RBP9.32□□□□□ -0.92
FOXN3-219ENST00000615335 OVOL2Q9BRP0 275 aa9.32□□□□□ -0.92
FOXN3-219ENST00000615335 C19orf73Q9NVV2 129 aa9.32□□□□□ -0.92
FOXN3-219ENST00000615335 MGAM2Q2M2H8 2515 aa9.32□□□□□ -0.92
FOXN3-219ENST00000615335 IGLV4-3A0A075B6K6 122 aa9.31□□□□□ -0.92
FOXN3-219ENST00000615335 UBE2D4Q9Y2X8 147 aa9.31□□□□□ -0.92
FOXN3-219ENST00000615335 NOTCH1P46531 2555 aa9.31□□□□□ -0.92
FOXN3-219ENST00000615335 HTN1P15515 57 aa9.3□□□□□ -0.92
FOXN3-219ENST00000615335 A0A087WVE0 104 aa9.3□□□□□ -0.92
FOXN3-219ENST00000615335 IGHV3-73A0A0B4J1V6 119 aa9.3□□□□□ -0.92
FOXN3-219ENST00000615335 ATP5EP2Q5VTU8 51 aa9.3□□□□□ -0.92
FOXN3-219ENST00000615335 S100A7L2Q5SY68 101 aa9.29□□□□□ -0.92
FOXN3-219ENST00000615335 GHRHP01286 108 aa9.29□□□□□ -0.92
FOXN3-219ENST00000615335 KRTAP10-11P60412 298 aa9.29□□□□□ -0.92
FOXN3-219ENST00000615335 KRTAP21-3Q3LHN1 58 aa9.29□□□□□ -0.92
FOXN3-219ENST00000615335 NBEAL1Q6ZS30 2694 aa9.28□□□□□ -0.92
FOXN3-219ENST00000615335 EGFEM1PQ0D2K5 195 aa9.28□□□□□ -0.92
FOXN3-219ENST00000615335 BCE1O60756 84 aa9.27□□□□□ -0.93
FOXN3-219ENST00000615335 XCL1P47992 114 aa9.27□□□□□ -0.93
FOXN3-219ENST00000615335 LINC00308Q8TCZ7 52 aa9.27□□□□□ -0.93
FOXN3-219ENST00000615335 LINC00846Q9NV44 126 aa9.27□□□□□ -0.93
FOXN3-219ENST00000615335 XCL2Q9UBD3 114 aa9.27□□□□□ -0.93
FOXN3-219ENST00000615335 A8MTW9 85 aa9.26□□□□□ -0.93
FOXN3-219ENST00000615335 NDUFA1O15239 70 aa9.26□□□□□ -0.93
FOXN3-219ENST00000615335 OBSCN-AS1Q96MR7 158 aa9.26□□□□□ -0.93
FOXN3-219ENST00000615335 C20orf197Q8N268 126 aa9.25□□□□□ -0.93
FOXN3-219ENST00000615335 PRM2P04554 102 aa9.24□□□□□ -0.93
FOXN3-219ENST00000615335 FAM104AQ969W3 186 aa9.24□□□□□ -0.93
FOXN3-219ENST00000615335 PIK3CD-AS1Q5SR53 167 aa9.24□□□□□ -0.93
FOXN3-219ENST00000615335 H7BZZ5 65 aa9.23□□□□□ -0.93
FOXN3-219ENST00000615335 Q6ZSN1 163 aa9.23□□□□□ -0.93
FOXN3-219ENST00000615335 FP248Q71RG6 208 aaPredicted RBP9.23□□□□□ -0.93
FOXN3-219ENST00000615335 FAM218AQ96MZ4 157 aa9.23□□□□□ -0.93
FOXN3-219ENST00000615335 TRBV10-3A0A0K0K1G6 114 aa9.22□□□□□ -0.93
FOXN3-219ENST00000615335 IGHV4-30-4P0DP06 118 aa9.22□□□□□ -0.93
FOXN3-219ENST00000615335 RNASE13Q5GAN3 156 aaKnown RBP9.22□□□□□ -0.93
FOXN3-219ENST00000615335 CHCHD7Q9BUK0 85 aa9.22□□□□□ -0.93
FOXN3-219ENST00000615335 C14orf132Q9NPU4 83 aa9.22□□□□□ -0.93
FOXN3-219ENST00000615335 DNHD1Q96M86 4753 aa9.22□□□□□ -0.93
FOXN3-219ENST00000615335 ATP5EP56381 51 aaPredicted RBP9.22□□□□□ -0.93
FOXN3-219ENST00000615335 BRK1Q8WUW1 75 aa9.22□□□□□ -0.93
FOXN3-219ENST00000615335 Q9UF83 564 aa9.22□□□□□ -0.93
FOXN3-219ENST00000615335 INSP01308 110 aa9.21□□□□□ -0.93
FOXN3-219ENST00000615335 RPL28P46779 137 aaKnown RBP9.21□□□□□ -0.94
FOXN3-219ENST00000615335 NACAE9PAV3 2078 aa9.2□□□□□ -0.94
FOXN3-219ENST00000615335 PRB2P02812 416 aaPredicted RBP9.2□□□□□ -0.94
FOXN3-219ENST00000615335 GIG44P09565 113 aaPredicted RBP9.2□□□□□ -0.94
FOXN3-219ENST00000615335 KLKP1Q107X0 134 aa9.2□□□□□ -0.94
FOXN3-219ENST00000615335 Q9HAA7 133 aa9.2□□□□□ -0.94
FOXN3-219ENST00000615335 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.2□□□□□ -0.94
FOXN3-219ENST00000615335 TRAV7A0A075B6U4 112 aa9.2□□□□□ -0.94
FOXN3-219ENST00000615335 IGHV3OR16-12A0A075B7B8 117 aa9.2□□□□□ -0.94
FOXN3-219ENST00000615335 IGKV2-29A2NJV5 120 aaPredicted RBP9.2□□□□□ -0.94
FOXN3-219ENST00000615335 C11orf72Q8NBR9 251 aa9.2□□□□□ -0.94
FOXN3-219ENST00000615335 TRAV13-2A0A0B4J235 113 aa9.19□□□□□ -0.94
FOXN3-219ENST00000615335 IGHV3-53P01767 116 aa9.19□□□□□ -0.94
FOXN3-219ENST00000615335 LINC00467Q9BRT7 94 aa9.19□□□□□ -0.94
FOXN3-219ENST00000615335 NBEAL2Q6ZNJ1 2754 aa9.19□□□□□ -0.94
FOXN3-219ENST00000615335 APOC4P55056 127 aa9.19□□□□□ -0.94
FOXN3-219ENST00000615335 DNAH3Q8TD57 4116 aa9.19□□□□□ -0.94
FOXN3-219ENST00000615335 TRAV23DV6A0A075B6W5 121 aa9.18□□□□□ -0.94
FOXN3-219ENST00000615335 IGHV3-38A0A0C4DH36 116 aa9.18□□□□□ -0.94
FOXN3-219ENST00000615335 A8MZ25 164 aa9.18□□□□□ -0.94
FOXN3-219ENST00000615335 NDUFC1O43677 76 aa9.18□□□□□ -0.94
FOXN3-219ENST00000615335 A0A0U1RQV1 116 aa9.17□□□□□ -0.94
FOXN3-219ENST00000615335 KPRPQ5T749 579 aaPredicted RBP9.17□□□□□ -0.94
FOXN3-219ENST00000615335 C1orf158Q8N1D5 194 aa9.17□□□□□ -0.94
FOXN3-219ENST00000615335 H0YGX0 51 aa9.17□□□□□ -0.94
FOXN3-219ENST00000615335 CCKP06307 115 aa9.17□□□□□ -0.94
FOXN3-219ENST00000615335 CSNK1G2-AS1Q8NCQ2 148 aa9.17□□□□□ -0.94
FOXN3-219ENST00000615335 LYPD5Q6UWN5 251 aa9.16□□□□□ -0.94
FOXN3-219ENST00000615335 IGLV5-45A0A087WSX0 123 aa9.15□□□□□ -0.94
FOXN3-219ENST00000615335 C6orf226Q5I0X4 101 aa9.15□□□□□ -0.94
FOXN3-219ENST00000615335 Q9H8V8 135 aa9.15□□□□□ -0.94
FOXN3-219ENST00000615335 TRBV7-6A0A0J9YX20 115 aa9.14□□□□□ -0.95
FOXN3-219ENST00000615335 DEFB135Q30KP9 77 aa9.14□□□□□ -0.95
FOXN3-219ENST00000615335 DGAT2L7PQ6IED9 249 aa9.14□□□□□ -0.95
FOXN3-219ENST00000615335 SOSTDC1Q6X4U4 206 aa9.14□□□□□ -0.95
FOXN3-219ENST00000615335 CRPP02741 224 aa9.14□□□□□ -0.95
FOXN3-219ENST00000615335 K7EIL1 84 aa9.13□□□□□ -0.95
FOXN3-219ENST00000615335 CDKN2A-AS1Q9UH64 79 aa9.13□□□□□ -0.95
FOXN3-219ENST00000615335 IGLV5-39A0A0G2JS06 123 aa9.13□□□□□ -0.95
FOXN3-219ENST00000615335 RBM3P98179 157 aaKnown RBP9.13□□□□□ -0.95
FOXN3-219ENST00000615335 C9orf129Q5T035 196 aaKnown RBP9.13□□□□□ -0.95
FOXN3-219ENST00000615335 TRGV1A0A0A0MS02 117 aa9.11□□□□□ -0.95
FOXN3-219ENST00000615335 ENHOQ6UWT2 76 aa9.11□□□□□ -0.95
FOXN3-219ENST00000615335 ZNF625Q96I27 306 aaPredicted RBP9.11□□□□□ -0.95
FOXN3-219ENST00000615335 LAMTOR3Q9UHA4 124 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms