RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 LINC00959A0A1B0GUT2 108 aa14.2□□□□□ -0.14
CBWD1-223ENST00000613988 COX8AP10176 69 aa14.2□□□□□ -0.14
CBWD1-223ENST00000613988 SS18Q15532 418 aa14.2□□□□□ -0.14
CBWD1-223ENST00000613988 LINC00469Q8N7U9 141 aa14.2□□□□□ -0.14
CBWD1-223ENST00000613988 LINC00269Q8N2A0 174 aa14.19□□□□□ -0.14
CBWD1-223ENST00000613988 C14orf144Q96I85 54 aa14.19□□□□□ -0.14
CBWD1-223ENST00000613988 DLEU1O43261 78 aa14.18□□□□□ -0.14
CBWD1-223ENST00000613988 NMUP48645 174 aa14.18□□□□□ -0.14
CBWD1-223ENST00000613988 REG3AQ06141 175 aa14.18□□□□□ -0.14
CBWD1-223ENST00000613988 C14orf177Q52M58 125 aa14.18□□□□□ -0.14
CBWD1-223ENST00000613988 SLC25A34Q6PIV7 304 aa14.18□□□□□ -0.14
CBWD1-223ENST00000613988 SCXQ7RTU7 201 aa14.18□□□□□ -0.14
CBWD1-223ENST00000613988 PRR34Q9NV39 138 aa14.18□□□□□ -0.14
CBWD1-223ENST00000613988 COX6A2Q02221 97 aa14.17□□□□□ -0.14
CBWD1-223ENST00000613988 CDKN2A-AS1Q9UH64 79 aa14.17□□□□□ -0.14
CBWD1-223ENST00000613988 IGKV2D-26A0A0A0MRZ7 120 aa14.16□□□□□ -0.14
CBWD1-223ENST00000613988 IGKV3OR2-268A0A0C4DH90 116 aa14.16□□□□□ -0.14
CBWD1-223ENST00000613988 PCP4L1A6NKN8 68 aa14.16□□□□□ -0.14
CBWD1-223ENST00000613988 LEPROTO15243 131 aa14.15□□□□□ -0.14
CBWD1-223ENST00000613988 DDTP30046 118 aa14.15□□□□□ -0.14
CBWD1-223ENST00000613988 BOD1L2Q8IYS8 172 aa14.15□□□□□ -0.14
CBWD1-223ENST00000613988 PLEKHB2Q96CS7 222 aa14.15□□□□□ -0.14
CBWD1-223ENST00000613988 J3QL48 77 aa14.14□□□□□ -0.15
CBWD1-223ENST00000613988 MIAQ16674 131 aa14.14□□□□□ -0.15
CBWD1-223ENST00000613988 IGHV1-58A0A0C4DH39 117 aa14.13□□□□□ -0.15
CBWD1-223ENST00000613988 TRAV8-4A0A0B4J246 113 aa14.12□□□□□ -0.15
CBWD1-223ENST00000613988 IGHV3OR16-9A0A0B4J2B5 98 aa14.12□□□□□ -0.15
CBWD1-223ENST00000613988 CLPSL2Q6UWE3 100 aa14.12□□□□□ -0.15
CBWD1-223ENST00000613988 PCP2Q8IVA1 136 aa14.12□□□□□ -0.15
CBWD1-223ENST00000613988 LINC01561Q8N1V8 128 aa14.11□□□□□ -0.15
CBWD1-223ENST00000613988 CIRBP-AS1Q8TBR5 109 aa14.11□□□□□ -0.15
CBWD1-223ENST00000613988 USP17L23D6RBM5 183 aa14.1□□□□□ -0.15
CBWD1-223ENST00000613988 J3QQQ9 107 aa14.1□□□□□ -0.15
CBWD1-223ENST00000613988 CD164L2Q6UWJ8 174 aa14.1□□□□□ -0.15
CBWD1-223ENST00000613988 A0A087WZ39 114 aa14.09□□□□□ -0.15
CBWD1-223ENST00000613988 IGLV5-39A0A0G2JS06 123 aa14.09□□□□□ -0.15
CBWD1-223ENST00000613988 SPINK8P0C7L1 97 aa14.09□□□□□ -0.15
CBWD1-223ENST00000613988 CHCHD10Q8WYQ3 142 aaPredicted RBP14.09□□□□□ -0.15
CBWD1-223ENST00000613988 LGALS3P17931 250 aaKnown RBP14.09□□□□□ -0.15
CBWD1-223ENST00000613988 XCL1P47992 114 aa14.09□□□□□ -0.15
CBWD1-223ENST00000613988 HNRNPA3P51991 378 aaKnown RBP14.09□□□□□ -0.15
CBWD1-223ENST00000613988 MYMXA0A1B0GTQ4 84 aa14.08□□□□□ -0.16
CBWD1-223ENST00000613988 SMIM1B2RUZ4 78 aa14.08□□□□□ -0.16
CBWD1-223ENST00000613988 IGHV3-64A0A075B6Q5 118 aa14.06□□□□□ -0.16
CBWD1-223ENST00000613988 ZNF815PA8K554 130 aa14.05□□□□□ -0.16
CBWD1-223ENST00000613988 KRTAP29-1A8MX34 341 aaPredicted RBP14.05□□□□□ -0.16
CBWD1-223ENST00000613988 TSPEAR-AS2P59090 65 aa14.05□□□□□ -0.16
CBWD1-223ENST00000613988 TTTY13Q9BZ97 58 aa14.05□□□□□ -0.16
CBWD1-223ENST00000613988 HIGD1BQ9P298 99 aa14.05□□□□□ -0.16
CBWD1-223ENST00000613988 COX7A2LO14548 114 aa14.04□□□□□ -0.16
CBWD1-223ENST00000613988 KRTAP26-1Q6PEX3 210 aa14.04□□□□□ -0.16
CBWD1-223ENST00000613988 IGLV10-54A0A075B6I4 117 aa14.03□□□□□ -0.16
CBWD1-223ENST00000613988 C5orf38Q86SI9 138 aa14.03□□□□□ -0.16
CBWD1-223ENST00000613988 FOXI1Q12951 378 aa14.02□□□□□ -0.17
CBWD1-223ENST00000613988 C2orf91Q6ZV80 131 aa14.02□□□□□ -0.17
CBWD1-223ENST00000613988 GAGE12HA6NDE8 117 aa14.01□□□□□ -0.17
CBWD1-223ENST00000613988 KRTAP10-4P60372 401 aaPredicted RBP14.01□□□□□ -0.17
CBWD1-223ENST00000613988 C9orf163Q8N9P6 203 aa14.01□□□□□ -0.17
CBWD1-223ENST00000613988 TP73-AS1Q9UF72 201 aa14.01□□□□□ -0.17
CBWD1-223ENST00000613988 NDUFA12Q9UI09 145 aa14□□□□□ -0.17
CBWD1-223ENST00000613988 LINC00587B1AMM8 73 aa13.99□□□□□ -0.17
CBWD1-223ENST00000613988 COX7B2Q8TF08 81 aa13.99□□□□□ -0.17
CBWD1-223ENST00000613988 LRP1Q07954 4544 aaKnown RBP13.99□□□□□ -0.17
CBWD1-223ENST00000613988 NDUFA1O15239 70 aa13.98□□□□□ -0.17
CBWD1-223ENST00000613988 APOMO95445 188 aa13.98□□□□□ -0.17
CBWD1-223ENST00000613988 MALP21145 153 aa13.98□□□□□ -0.17
CBWD1-223ENST00000613988 CTAG1AP78358 180 aa13.98□□□□□ -0.17
CBWD1-223ENST00000613988 SCGB1D4Q6XE38 83 aa13.98□□□□□ -0.17
CBWD1-223ENST00000613988 SFTA2Q6UW10 78 aa13.97□□□□□ -0.17
CBWD1-223ENST00000613988 Q8IZM0 81 aa13.96□□□□□ -0.18
CBWD1-223ENST00000613988 FAT3Q8TDW7 4589 aa13.95□□□□□ -0.18
CBWD1-223ENST00000613988 RPL37AP61513 92 aaKnown RBP13.95□□□□□ -0.18
CBWD1-223ENST00000613988 HERV-K104P63124 156 aa13.95□□□□□ -0.18
CBWD1-223ENST00000613988 SDIM1Q6ZPB5 146 aa13.95□□□□□ -0.18
CBWD1-223ENST00000613988 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.95□□□□□ -0.18
CBWD1-223ENST00000613988 PRSS2P07478 247 aa13.94□□□□□ -0.18
CBWD1-223ENST00000613988 HSD52Q0P140 79 aa13.94□□□□□ -0.18
CBWD1-223ENST00000613988 TAL2Q16559 108 aa13.94□□□□□ -0.18
CBWD1-223ENST00000613988 ZNF625Q96I27 306 aaPredicted RBP13.94□□□□□ -0.18
CBWD1-223ENST00000613988 TOMM7Q9P0U1 55 aa13.94□□□□□ -0.18
CBWD1-223ENST00000613988 PKHD1L1Q86WI1 4243 aa13.93□□□□□ -0.18
CBWD1-223ENST00000613988 A0A0J9YXY3 114 aa13.93□□□□□ -0.18
CBWD1-223ENST00000613988 CNBPP62633 177 aaKnown RBP13.93□□□□□ -0.18
CBWD1-223ENST00000613988 ORAOV1Q8WV07 137 aa13.93□□□□□ -0.18
CBWD1-223ENST00000613988 OXTP01178 125 aa13.92□□□□□ -0.18
CBWD1-223ENST00000613988 CXCL5P42830 114 aa13.92□□□□□ -0.18
CBWD1-223ENST00000613988 C6orf226Q5I0X4 101 aa13.92□□□□□ -0.18
CBWD1-223ENST00000613988 PANO1I0J062 215 aa13.91□□□□□ -0.18
CBWD1-223ENST00000613988 M0R143 59 aa13.91□□□□□ -0.18
CBWD1-223ENST00000613988 TIMM17BO60830 172 aa13.91□□□□□ -0.18
CBWD1-223ENST00000613988 SPANXB1Q9NS25 103 aaPredicted RBP13.91□□□□□ -0.18
CBWD1-223ENST00000613988 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.89□□□□□ -0.19
CBWD1-223ENST00000613988 TMEM238C9JI98 176 aa13.89□□□□□ -0.19
CBWD1-223ENST00000613988 KIAA0087Q14695 138 aa13.89□□□□□ -0.19
CBWD1-223ENST00000613988 CFAP161Q6P656 301 aa13.89□□□□□ -0.19
CBWD1-223ENST00000613988 CIRBPQ14011 172 aaKnown RBP13.88□□□□□ -0.19
CBWD1-223ENST00000613988 DPH3Q96FX2 82 aa13.88□□□□□ -0.19
CBWD1-223ENST00000613988 SLPIP03973 132 aa13.87□□□□□ -0.19
CBWD1-223ENST00000613988 HIST1H4GQ99525 98 aa13.87□□□□□ -0.19
CBWD1-223ENST00000613988 CKS1BP61024 79 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms