RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 TSPEAR-AS2P59090 65 aa6.4□□□□□ -1.38
TTC28-208ENST00000612946 ELOF1P60002 83 aaKnown RBP6.4□□□□□ -1.38
TTC28-208ENST00000612946 DEFB114Q30KQ6 69 aa6.4□□□□□ -1.39
TTC28-208ENST00000612946 SMAD5-AS1Q9Y6J3 95 aa6.39□□□□□ -1.39
TTC28-208ENST00000612946 EPG5Q9HCE0 2579 aa6.39□□□□□ -1.39
TTC28-208ENST00000612946 ADAMTSL4-AS1Q5T5F5 129 aa6.39□□□□□ -1.39
TTC28-208ENST00000612946 PIP4P1Q86T03 277 aa6.39□□□□□ -1.39
TTC28-208ENST00000612946 MAPK1IP1LQ8NDC0 245 aa6.39□□□□□ -1.39
TTC28-208ENST00000612946 BRI3O95415 125 aa6.39□□□□□ -1.39
TTC28-208ENST00000612946 FBXL19-AS1Q494R0 122 aa6.39□□□□□ -1.39
TTC28-208ENST00000612946 LELP1Q5T871 98 aa6.39□□□□□ -1.39
TTC28-208ENST00000612946 LINC00575Q6W349 94 aa6.39□□□□□ -1.39
TTC28-208ENST00000612946 IGLV5-39A0A0G2JS06 123 aa6.39□□□□□ -1.39
TTC28-208ENST00000612946 LINC00959A0A1B0GUT2 108 aa6.38□□□□□ -1.39
TTC28-208ENST00000612946 Q6ZTI0 123 aa6.38□□□□□ -1.39
TTC28-208ENST00000612946 A6NDX4 124 aa6.38□□□□□ -1.39
TTC28-208ENST00000612946 SMCPP49901 116 aaPredicted RBP6.38□□□□□ -1.39
TTC28-208ENST00000612946 A0A1B0GUV1 79 aa6.37□□□□□ -1.39
TTC28-208ENST00000612946 C1orf64Q8NEQ6 169 aa6.37□□□□□ -1.39
TTC28-208ENST00000612946 IL17DQ8TAD2 202 aa6.37□□□□□ -1.39
TTC28-208ENST00000612946 ACYP2P14621 99 aa6.37□□□□□ -1.39
TTC28-208ENST00000612946 LINC00482Q8N8I6 264 aa6.37□□□□□ -1.39
TTC28-208ENST00000612946 DEFB136Q30KP8 78 aa6.36□□□□□ -1.39
TTC28-208ENST00000612946 OXLD1Q5BKU9 147 aa6.36□□□□□ -1.39
TTC28-208ENST00000612946 TNFRSF13BO14836 293 aaPredicted RBP6.36□□□□□ -1.39
TTC28-208ENST00000612946 ZNF580Q9UK33 172 aa6.36□□□□□ -1.39
TTC28-208ENST00000612946 ZNF843Q8N446 348 aa6.36□□□□□ -1.39
TTC28-208ENST00000612946 IGLV5-45A0A087WSX0 123 aa6.36□□□□□ -1.39
TTC28-208ENST00000612946 KPRPQ5T749 579 aaPredicted RBP6.36□□□□□ -1.39
TTC28-208ENST00000612946 F8W735 103 aaPredicted RBP6.36□□□□□ -1.39
TTC28-208ENST00000612946 LRCOL1A6NCL2 159 aa6.36□□□□□ -1.39
TTC28-208ENST00000612946 A0A1B0GU69 56 aa6.35□□□□□ -1.39
TTC28-208ENST00000612946 IGHV4-30-2A0A087WSY4 118 aa6.35□□□□□ -1.39
TTC28-208ENST00000612946 LINC01548A6NM66 108 aa6.35□□□□□ -1.39
TTC28-208ENST00000612946 ZFP36P26651 326 aaKnown RBP6.35□□□□□ -1.39
TTC28-208ENST00000612946 MAST4O15021 2626 aa6.35□□□□□ -1.39
TTC28-208ENST00000612946 FAM19A4Q96LR4 140 aa6.35□□□□□ -1.39
TTC28-208ENST00000612946 C2orf48Q96LS8 159 aa6.35□□□□□ -1.39
TTC28-208ENST00000612946 DAZAP2Q15038 168 aaPredicted RBP6.35□□□□□ -1.39
TTC28-208ENST00000612946 LCA10Q71F78 164 aa6.34□□□□□ -1.39
TTC28-208ENST00000612946 C11orf72Q8NBR9 251 aa6.34□□□□□ -1.39
TTC28-208ENST00000612946 C11orf21Q9P2W6 132 aa6.34□□□□□ -1.39
TTC28-208ENST00000612946 PRR9Q5T870 116 aa6.33□□□□□ -1.4
TTC28-208ENST00000612946 Q6ZTC4 211 aa6.33□□□□□ -1.4
TTC28-208ENST00000612946 LINC00337Q8N6G1 96 aa6.33□□□□□ -1.4
TTC28-208ENST00000612946 XAGE1AQ9HD64 81 aa6.33□□□□□ -1.4
TTC28-208ENST00000612946 PLA2G2CQ5R387 149 aa6.32□□□□□ -1.4
TTC28-208ENST00000612946 IGHV4-38-2P0DP08 117 aa6.32□□□□□ -1.4
TTC28-208ENST00000612946 REG3GQ6UW15 175 aa6.32□□□□□ -1.4
TTC28-208ENST00000612946 DEFB135Q30KP9 77 aa6.32□□□□□ -1.4
TTC28-208ENST00000612946 ZNF702PQ9H963 129 aa6.31□□□□□ -1.4
TTC28-208ENST00000612946 A0A0J9YWU9 116 aa6.31□□□□□ -1.4
TTC28-208ENST00000612946 BPTFQ12830 3046 aa6.31□□□□□ -1.4
TTC28-208ENST00000612946 Q6ZQT0 140 aa6.31□□□□□ -1.4
TTC28-208ENST00000612946 GAS8-AS1O95177 125 aa6.31□□□□□ -1.4
TTC28-208ENST00000612946 FHL2Q14192 279 aa6.31□□□□□ -1.4
TTC28-208ENST00000612946 CYSRT1A8MQ03 144 aa6.3□□□□□ -1.4
TTC28-208ENST00000612946 HECTD1Q9ULT8 2610 aa6.29□□□□□ -1.4
TTC28-208ENST00000612946 IGKV2-28A0A075B6P5 120 aa6.29□□□□□ -1.4
TTC28-208ENST00000612946 IGKV2D-28P01615 120 aa6.29□□□□□ -1.4
TTC28-208ENST00000612946 LOC101927531A0A1B0GV80 90 aa6.29□□□□□ -1.4
TTC28-208ENST00000612946 LINC00336Q6ZUF6 198 aa6.29□□□□□ -1.4
TTC28-208ENST00000612946 C7orf33Q8WU49 177 aa6.29□□□□□ -1.4
TTC28-208ENST00000612946 Q6ZSV7 163 aa6.29□□□□□ -1.4
TTC28-208ENST00000612946 TRAV22A0A0B4J277 110 aa6.29□□□□□ -1.4
TTC28-208ENST00000612946 DEFB1P60022 68 aa6.29□□□□□ -1.4
TTC28-208ENST00000612946 Q8N2B8 174 aa6.28□□□□□ -1.4
TTC28-208ENST00000612946 IGHV4-61A0A0C4DH41 118 aa6.28□□□□□ -1.4
TTC28-208ENST00000612946 C1orf229Q6ZS94 237 aaPredicted RBP6.28□□□□□ -1.4
TTC28-208ENST00000612946 SPATA3Q8NHX4 192 aa6.28□□□□□ -1.4
TTC28-208ENST00000612946 LOC100131303A0A0U1RQF7 123 aa6.27□□□□□ -1.4
TTC28-208ENST00000612946 C6orf48Q9UBA6 75 aa6.27□□□□□ -1.4
TTC28-208ENST00000612946 C11orf45Q8TAV5 145 aa6.27□□□□□ -1.41
TTC28-208ENST00000612946 IGLV1-40P01703 118 aa6.27□□□□□ -1.41
TTC28-208ENST00000612946 SMIM29Q86T20 159 aa6.27□□□□□ -1.41
TTC28-208ENST00000612946 C6orf223Q8N319 242 aa6.27□□□□□ -1.41
TTC28-208ENST00000612946 AKAP13Q12802 2813 aa6.27□□□□□ -1.41
TTC28-208ENST00000612946 DEFB113Q30KQ7 82 aa6.26□□□□□ -1.41
TTC28-208ENST00000612946 SPANXA2-OT1Q8N9U9 137 aa6.26□□□□□ -1.41
TTC28-208ENST00000612946 MOBPQ13875 183 aa6.26□□□□□ -1.41
TTC28-208ENST00000612946 C9orf116Q5BN46 136 aaPredicted RBP6.26□□□□□ -1.41
TTC28-208ENST00000612946 IGKV2-24A0A0C4DH68 120 aa6.25□□□□□ -1.41
TTC28-208ENST00000612946 DNAJC9-AS1A6NH13 148 aa6.25□□□□□ -1.41
TTC28-208ENST00000612946 Q1T7F1 81 aa6.25□□□□□ -1.41
TTC28-208ENST00000612946 LINC01600Q96MT4 127 aa6.24□□□□□ -1.41
TTC28-208ENST00000612946 ATRQ13535 2644 aa6.24□□□□□ -1.41
TTC28-208ENST00000612946 H7BZZ5 65 aa6.24□□□□□ -1.41
TTC28-208ENST00000612946 COX6A2Q02221 97 aa6.24□□□□□ -1.41
TTC28-208ENST00000612946 Q9BRP9 147 aa6.24□□□□□ -1.41
TTC28-208ENST00000612946 UQCR11O14957 56 aa6.24□□□□□ -1.41
TTC28-208ENST00000612946 CR1P17927 2039 aa6.24□□□□□ -1.41
TTC28-208ENST00000612946 Q8NBF4 154 aa6.24□□□□□ -1.41
TTC28-208ENST00000612946 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.23□□□□□ -1.41
TTC28-208ENST00000612946 FLNBO75369 2602 aaKnown RBP6.23□□□□□ -1.41
TTC28-208ENST00000612946 Q6YL49 198 aa6.23□□□□□ -1.41
TTC28-208ENST00000612946 TM2D3Q9BRN9 247 aa6.23□□□□□ -1.41
TTC28-208ENST00000612946 IGHV6-1A0A0B4J1U7 121 aa6.23□□□□□ -1.41
TTC28-208ENST00000612946 CDC42SE1Q9NRR8 79 aa6.22□□□□□ -1.41
TTC28-208ENST00000612946 KIF25-AS1Q9Y6Z4 181 aa6.22□□□□□ -1.41
TTC28-208ENST00000612946 LMO4P61968 165 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms