RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 WFDC6Q9BQY6 131 aa1.59□□□□□ -2.15
SMCHD1-213ENST00000609587 DOCK10Q96BY6 2186 aa1.59□□□□□ -2.16
SMCHD1-213ENST00000609587 PCDH15Q96QU1 1955 aa1.59□□□□□ -2.16
SMCHD1-213ENST00000609587 KIAA0556O60303 1618 aa1.58□□□□□ -2.16
SMCHD1-213ENST00000609587 NESP48681 1621 aa1.58□□□□□ -2.16
SMCHD1-213ENST00000609587 ABCA5Q8WWZ7 1642 aa1.58□□□□□ -2.16
SMCHD1-213ENST00000609587 PHRF1Q9P1Y6 1649 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-213ENST00000609587 ICE1Q9Y2F5 2266 aa1.58□□□□□ -2.16
SMCHD1-213ENST00000609587 COL14A1Q05707 1796 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-213ENST00000609587 ABCC6O95255 1503 aa1.58□□□□□ -2.16
SMCHD1-213ENST00000609587 SNRPGP15A8MWD9 76 aa1.58□□□□□ -2.16
SMCHD1-213ENST00000609587 F8VRH5 84 aa1.58□□□□□ -2.16
SMCHD1-213ENST00000609587 M0R135 149 aa1.58□□□□□ -2.16
SMCHD1-213ENST00000609587 C5orf56Q8N8D9 126 aa1.58□□□□□ -2.16
SMCHD1-213ENST00000609587 PRR15LQ9BU68 103 aa1.58□□□□□ -2.16
SMCHD1-213ENST00000609587 ERCC6L2Q5T890 1561 aa1.58□□□□□ -2.16
SMCHD1-213ENST00000609587 FN1P02751 2386 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-213ENST00000609587 ALPK2Q86TB3 2170 aa1.58□□□□□ -2.16
SMCHD1-213ENST00000609587 INTS1Q8N201 2190 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-213ENST00000609587 SDK1Q7Z5N4 2213 aa1.58□□□□□ -2.16
SMCHD1-213ENST00000609587 ANKRD50Q9ULJ7 1429 aa1.57□□□□□ -2.16
SMCHD1-213ENST00000609587 PKD1L3Q7Z443 1732 aa1.57□□□□□ -2.16
SMCHD1-213ENST00000609587 UBR3Q6ZT12 1888 aa1.57□□□□□ -2.16
SMCHD1-213ENST00000609587 D6R8Y8 96 aa1.57□□□□□ -2.16
SMCHD1-213ENST00000609587 IL9P15248 144 aa1.57□□□□□ -2.16
SMCHD1-213ENST00000609587 S100A3P33764 101 aa1.57□□□□□ -2.16
SMCHD1-213ENST00000609587 SPINT3P49223 89 aa1.57□□□□□ -2.16
SMCHD1-213ENST00000609587 FXYD3Q14802 87 aa1.57□□□□□ -2.16
SMCHD1-213ENST00000609587 GDF5OSQ5U4N7 250 aa1.57□□□□□ -2.16
SMCHD1-213ENST00000609587 MUSTN1Q8IVN3 82 aa1.57□□□□□ -2.16
SMCHD1-213ENST00000609587 LINC00472Q9H8W2 130 aa1.57□□□□□ -2.16
SMCHD1-213ENST00000609587 KMT2BQ9UMN6 2715 aaPredicted RBP1.57□□□□□ -2.16
SMCHD1-213ENST00000609587 RICTORQ6R327 1708 aa1.57□□□□□ -2.16
SMCHD1-213ENST00000609587 TIAM2Q8IVF5 1701 aa1.57□□□□□ -2.16
SMCHD1-213ENST00000609587 BCORQ6W2J9 1755 aa1.57□□□□□ -2.16
SMCHD1-213ENST00000609587 A0A087WVE0 104 aa1.56□□□□□ -2.16
SMCHD1-213ENST00000609587 LCE6AA0A183 80 aa1.56□□□□□ -2.16
SMCHD1-213ENST00000609587 LEPROTL1O95214 131 aa1.56□□□□□ -2.16
SMCHD1-213ENST00000609587 RPL37AP61513 92 aaKnown RBP1.56□□□□□ -2.16
SMCHD1-213ENST00000609587 Q96NJ1 140 aa1.56□□□□□ -2.16
SMCHD1-213ENST00000609587 SNURFQ9Y675 71 aa1.56□□□□□ -2.16
SMCHD1-213ENST00000609587 FBN3Q75N90 2809 aa1.55□□□□□ -2.16
SMCHD1-213ENST00000609587 A0A0D9SFI3 127 aa1.55□□□□□ -2.16
SMCHD1-213ENST00000609587 IGKV2-29A2NJV5 120 aaPredicted RBP1.55□□□□□ -2.16
SMCHD1-213ENST00000609587 UQCR11O14957 56 aa1.55□□□□□ -2.16
SMCHD1-213ENST00000609587 SPATA8Q6RVD6 105 aa1.55□□□□□ -2.16
SMCHD1-213ENST00000609587 Q6ZRN7 208 aaPredicted RBP1.55□□□□□ -2.16
SMCHD1-213ENST00000609587 KLK9Q9UKQ9 250 aa1.55□□□□□ -2.16
SMCHD1-213ENST00000609587 R4GMQ9 66 aa1.55□□□□□ -2.16
SMCHD1-213ENST00000609587 NCOA6Q14686 2063 aaPredicted RBP1.55□□□□□ -2.16
SMCHD1-213ENST00000609587 FREM1Q5H8C1 2179 aa1.55□□□□□ -2.16
SMCHD1-213ENST00000609587 ZMYM4Q5VZL5 1548 aa1.55□□□□□ -2.16
SMCHD1-213ENST00000609587 POLR1AO95602 1720 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-213ENST00000609587 TJP1Q07157 1748 aa1.54□□□□□ -2.16
SMCHD1-213ENST00000609587 ZNF236Q9UL36 1845 aa1.54□□□□□ -2.16
SMCHD1-213ENST00000609587 SPINK7P58062 85 aa1.54□□□□□ -2.16
SMCHD1-213ENST00000609587 LINC00322Q6ZN03 302 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-213ENST00000609587 BAGE3Q86Y29 109 aa1.54□□□□□ -2.16
SMCHD1-213ENST00000609587 BAGE2Q86Y30 109 aa1.54□□□□□ -2.16
SMCHD1-213ENST00000609587 FDCSPQ8NFU4 85 aa1.54□□□□□ -2.16
SMCHD1-213ENST00000609587 ZNF625Q96I27 306 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-213ENST00000609587 V9GYV3 84 aa1.54□□□□□ -2.16
SMCHD1-213ENST00000609587 AGLP35573 1532 aa1.54□□□□□ -2.16
SMCHD1-213ENST00000609587 KIAA0586Q9BVV6 1533 aa1.54□□□□□ -2.16
SMCHD1-213ENST00000609587 SAMD9Q5K651 1589 aa1.54□□□□□ -2.16
SMCHD1-213ENST00000609587 C3P01024 1663 aa1.54□□□□□ -2.16
SMCHD1-213ENST00000609587 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.53□□□□□ -2.16
SMCHD1-213ENST00000609587 M0R3E3 92 aa1.53□□□□□ -2.16
SMCHD1-213ENST00000609587 C5P01031 1676 aa1.53□□□□□ -2.16
SMCHD1-213ENST00000609587 MGPP08493 103 aa1.53□□□□□ -2.16
SMCHD1-213ENST00000609587 IFI6P09912 130 aa1.53□□□□□ -2.16
SMCHD1-213ENST00000609587 MED13LQ71F56 2210 aa1.53□□□□□ -2.16
SMCHD1-213ENST00000609587 WFDC10AQ9H1F0 79 aa1.53□□□□□ -2.16
SMCHD1-213ENST00000609587 LY75O60449 1722 aa1.52□□□□□ -2.17
SMCHD1-213ENST00000609587 DOT1LQ8TEK3 1739 aa1.52□□□□□ -2.17
SMCHD1-213ENST00000609587 ADCY10Q96PN6 1610 aa1.52□□□□□ -2.17
SMCHD1-213ENST00000609587 SLIT1O75093 1534 aa1.52□□□□□ -2.17
SMCHD1-213ENST00000609587 EFCAB6Q5THR3 1501 aa1.52□□□□□ -2.17
SMCHD1-213ENST00000609587 H3BVH4 76 aa1.52□□□□□ -2.17
SMCHD1-213ENST00000609587 FXYD4P59646 89 aa1.52□□□□□ -2.17
SMCHD1-213ENST00000609587 ATXN8Q156A1 80 aa1.52□□□□□ -2.17
SMCHD1-213ENST00000609587 LINC00208Q96KT6 92 aa1.52□□□□□ -2.17
SMCHD1-213ENST00000609587 FXYD6Q9H0Q3 95 aa1.52□□□□□ -2.17
SMCHD1-213ENST00000609587 ANKRD17O75179 2603 aaKnown RBP1.52□□□□□ -2.17
SMCHD1-213ENST00000609587 DNAL4O96015 105 aa1.51□□□□□ -2.17
SMCHD1-213ENST00000609587 PRB1P04280 392 aa1.51□□□□□ -2.17
SMCHD1-213ENST00000609587 TMEM14CQ9P0S9 112 aa1.51□□□□□ -2.17
SMCHD1-213ENST00000609587 PAPPA2Q9BXP8 1791 aa1.51□□□□□ -2.17
SMCHD1-213ENST00000609587 SORL1Q92673 2214 aa1.51□□□□□ -2.17
SMCHD1-213ENST00000609587 CPS1P31327 1500 aa1.5□□□□□ -2.17
SMCHD1-213ENST00000609587 TRBV30A0A0K0K1B3 111 aa1.5□□□□□ -2.17
SMCHD1-213ENST00000609587 A0A1B0GUT8 65 aa1.5□□□□□ -2.17
SMCHD1-213ENST00000609587 H0Y9P7 68 aa1.5□□□□□ -2.17
SMCHD1-213ENST00000609587 HCRTO43612 131 aa1.5□□□□□ -2.17
SMCHD1-213ENST00000609587 COA5Q86WW8 74 aa1.5□□□□□ -2.17
SMCHD1-213ENST00000609587 FAM103A1Q9BTL3 118 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-213ENST00000609587 NWD1Q149M9 1564 aa1.5□□□□□ -2.17
SMCHD1-213ENST00000609587 NRXN3Q9Y4C0 1643 aa1.49□□□□□ -2.17
SMCHD1-213ENST00000609587 TRGV1A0A0A0MS02 117 aa1.49□□□□□ -2.17
SMCHD1-213ENST00000609587 LINC01549A6NIU2 74 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms