RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 COL7A1Q02388 2944 aa7□□□□□ -1.29
CTCFL-222ENST00000609232 CLEC2BQ92478 149 aa6.99□□□□□ -1.29
CTCFL-222ENST00000609232 C19orf73Q9NVV2 129 aa6.99□□□□□ -1.29
CTCFL-222ENST00000609232 A0A0B4J2C4 111 aa6.99□□□□□ -1.29
CTCFL-222ENST00000609232 MALP21145 153 aa6.99□□□□□ -1.29
CTCFL-222ENST00000609232 COX6A2Q02221 97 aa6.99□□□□□ -1.29
CTCFL-222ENST00000609232 IGHV4-30-4P0DP06 118 aa6.99□□□□□ -1.29
CTCFL-222ENST00000609232 IGLV4-60A0A075B6I1 120 aa6.98□□□□□ -1.29
CTCFL-222ENST00000609232 FAM236DA0A1B0GTK5 79 aa6.98□□□□□ -1.29
CTCFL-222ENST00000609232 LEPROTO15243 131 aa6.98□□□□□ -1.29
CTCFL-222ENST00000609232 FAM236CP0DP71 79 aa6.98□□□□□ -1.29
CTCFL-222ENST00000609232 C11orf72Q8NBR9 251 aa6.98□□□□□ -1.29
CTCFL-222ENST00000609232 IGLV4-3A0A075B6K6 122 aa6.98□□□□□ -1.29
CTCFL-222ENST00000609232 DPH3Q96FX2 82 aa6.98□□□□□ -1.29
CTCFL-222ENST00000609232 CELA1Q9UNI1 258 aa6.98□□□□□ -1.29
CTCFL-222ENST00000609232 PRR3P79522 188 aaKnown RBP6.98□□□□□ -1.29
CTCFL-222ENST00000609232 C9orf116Q5BN46 136 aaPredicted RBP6.98□□□□□ -1.29
CTCFL-222ENST00000609232 LINC00269Q8N2A0 174 aa6.98□□□□□ -1.29
CTCFL-222ENST00000609232 ICOSQ9Y6W8 199 aa6.98□□□□□ -1.29
CTCFL-222ENST00000609232 IGIPA6NJ69 53 aa6.97□□□□□ -1.29
CTCFL-222ENST00000609232 POLR2KP53803 58 aaKnown RBP6.97□□□□□ -1.29
CTCFL-222ENST00000609232 DAZ2Q13117 558 aaKnown RBP6.97□□□□□ -1.29
CTCFL-222ENST00000609232 DAZ4Q86SG3 579 aaKnown RBP6.97□□□□□ -1.29
CTCFL-222ENST00000609232 DAZ3Q9NR90 486 aaKnown RBP6.97□□□□□ -1.29
CTCFL-222ENST00000609232 PRO0628Q9UI54 55 aa6.97□□□□□ -1.29
CTCFL-222ENST00000609232 GIG44P09565 113 aaPredicted RBP6.97□□□□□ -1.29
CTCFL-222ENST00000609232 HIGD2BQ4VC39 106 aa6.97□□□□□ -1.29
CTCFL-222ENST00000609232 TIMM17AQ99595 171 aa6.97□□□□□ -1.29
CTCFL-222ENST00000609232 C16orf74Q96GX8 76 aa6.97□□□□□ -1.29
CTCFL-222ENST00000609232 TMEM243Q9BU79 118 aa6.97□□□□□ -1.29
CTCFL-222ENST00000609232 IGHV4-28A0A0C4DH34 117 aa6.96□□□□□ -1.29
CTCFL-222ENST00000609232 H7C423 109 aa6.96□□□□□ -1.29
CTCFL-222ENST00000609232 K7EQD1 137 aa6.96□□□□□ -1.29
CTCFL-222ENST00000609232 NANOS2P60321 138 aaKnown RBP6.96□□□□□ -1.29
CTCFL-222ENST00000609232 H3BT86 120 aa6.96□□□□□ -1.3
CTCFL-222ENST00000609232 A0A0J9YXY3 114 aa6.95□□□□□ -1.3
CTCFL-222ENST00000609232 TRBV30A0A0K0K1B3 111 aa6.95□□□□□ -1.3
CTCFL-222ENST00000609232 EIF4EBP3O60516 100 aaPredicted RBP6.95□□□□□ -1.3
CTCFL-222ENST00000609232 C1orf195Q5TG92 126 aa6.95□□□□□ -1.3
CTCFL-222ENST00000609232 C3orf22Q8N5N4 141 aa6.95□□□□□ -1.3
CTCFL-222ENST00000609232 OXTP01178 125 aa6.95□□□□□ -1.3
CTCFL-222ENST00000609232 BRK1Q8WUW1 75 aa6.95□□□□□ -1.3
CTCFL-222ENST00000609232 TRACP01848 142 aa6.95□□□□□ -1.3
CTCFL-222ENST00000609232 TRBV6-5A0A0K0K1A5 114 aa6.94□□□□□ -1.3
CTCFL-222ENST00000609232 TRBV27A0A0K0K1C4 114 aa6.94□□□□□ -1.3
CTCFL-222ENST00000609232 TMEM223A0PJW6 202 aa6.94□□□□□ -1.3
CTCFL-222ENST00000609232 APOC4P55056 127 aa6.94□□□□□ -1.3
CTCFL-222ENST00000609232 H3BS24 57 aa6.93□□□□□ -1.3
CTCFL-222ENST00000609232 NTM-AS1Q6ZSK4 140 aa6.93□□□□□ -1.3
CTCFL-222ENST00000609232 AMELXQ99217 191 aa6.93□□□□□ -1.3
CTCFL-222ENST00000609232 XAGE1AQ9HD64 81 aa6.93□□□□□ -1.3
CTCFL-222ENST00000609232 ATP5G1P05496 136 aa6.92□□□□□ -1.3
CTCFL-222ENST00000609232 CYSTM1Q9H1C7 97 aa6.92□□□□□ -1.3
CTCFL-222ENST00000609232 ADAMTSL4-AS1Q5T5F5 129 aa6.92□□□□□ -1.3
CTCFL-222ENST00000609232 CSNK1G2-AS1Q8NCQ2 148 aa6.92□□□□□ -1.3
CTCFL-222ENST00000609232 C2orf48Q96LS8 159 aa6.92□□□□□ -1.3
CTCFL-222ENST00000609232 FUSP35637 526 aaKnown RBP eCLIP6.92□□□□□ -1.3
CTCFL-222ENST00000609232 Q6ZTC4 211 aa6.92□□□□□ -1.3
CTCFL-222ENST00000609232 IGKV2D-24A0A075B6R9 120 aa6.91□□□□□ -1.3
CTCFL-222ENST00000609232 RHOHQ15669 191 aa6.91□□□□□ -1.3
CTCFL-222ENST00000609232 FAM19A1Q7Z5A9 133 aa6.91□□□□□ -1.3
CTCFL-222ENST00000609232 WFDC9Q8NEX5 89 aa6.91□□□□□ -1.3
CTCFL-222ENST00000609232 A0A0J9YWU9 116 aa6.91□□□□□ -1.3
CTCFL-222ENST00000609232 M0R2N4 97 aa6.91□□□□□ -1.3
CTCFL-222ENST00000609232 UQCRQO14949 82 aa6.91□□□□□ -1.3
CTCFL-222ENST00000609232 S100A7L2Q5SY68 101 aa6.91□□□□□ -1.3
CTCFL-222ENST00000609232 FAM240AA0A1B0GVK7 77 aa6.9□□□□□ -1.3
CTCFL-222ENST00000609232 LST1O00453 97 aa6.9□□□□□ -1.31
CTCFL-222ENST00000609232 C6orf223Q8N319 242 aa6.89□□□□□ -1.31
CTCFL-222ENST00000609232 TRBV7-7A0A0K0K1E9 115 aa6.89□□□□□ -1.31
CTCFL-222ENST00000609232 A0A1B0GX51 115 aa6.89□□□□□ -1.31
CTCFL-222ENST00000609232 IGKV3D-7A0A0C4DH55 119 aa6.89□□□□□ -1.31
CTCFL-222ENST00000609232 CRPP02741 224 aa6.89□□□□□ -1.31
CTCFL-222ENST00000609232 SLPIP03973 132 aa6.89□□□□□ -1.31
CTCFL-222ENST00000609232 ACYP1P07311 99 aa6.89□□□□□ -1.31
CTCFL-222ENST00000609232 PLAC8L1A1L4L8 177 aa6.88□□□□□ -1.31
CTCFL-222ENST00000609232 LINC00643Q86TS7 51 aa6.88□□□□□ -1.31
CTCFL-222ENST00000609232 MIR7-3HGQ8N6C7 128 aa6.88□□□□□ -1.31
CTCFL-222ENST00000609232 CHCHD7Q9BUK0 85 aa6.88□□□□□ -1.31
CTCFL-222ENST00000609232 MIAQ16674 131 aa6.88□□□□□ -1.31
CTCFL-222ENST00000609232 UBE2D4Q9Y2X8 147 aa6.88□□□□□ -1.31
CTCFL-222ENST00000609232 PYGO1Q9Y3Y4 419 aa6.88□□□□□ -1.31
CTCFL-222ENST00000609232 X6R8D5 127 aa6.88□□□□□ -1.31
CTCFL-222ENST00000609232 TRBV10-1A0A0K0K1A3 114 aa6.87□□□□□ -1.31
CTCFL-222ENST00000609232 SDIM1Q6ZPB5 146 aa6.87□□□□□ -1.31
CTCFL-222ENST00000609232 OVOL2Q9BRP0 275 aa6.87□□□□□ -1.31
CTCFL-222ENST00000609232 IMUPQ9GZP8 106 aa6.87□□□□□ -1.31
CTCFL-222ENST00000609232 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.86□□□□□ -1.31
CTCFL-222ENST00000609232 IGHV1-58A0A0C4DH39 117 aa6.86□□□□□ -1.31
CTCFL-222ENST00000609232 BAALC-AS2P0C853 105 aa6.86□□□□□ -1.31
CTCFL-222ENST00000609232 SPART-AS1P0CW21 52 aa6.86□□□□□ -1.31
CTCFL-222ENST00000609232 LINC00242Q5T6M2 205 aa6.86□□□□□ -1.31
CTCFL-222ENST00000609232 A0A087WVE0 104 aa6.86□□□□□ -1.31
CTCFL-222ENST00000609232 HIST1H4AP62805 103 aaKnown RBP6.86□□□□□ -1.31
CTCFL-222ENST00000609232 FHL2Q14192 279 aa6.86□□□□□ -1.31
CTCFL-222ENST00000609232 PRO0255Q9UI72 69 aa6.86□□□□□ -1.31
CTCFL-222ENST00000609232 NCR3O14931 201 aa6.86□□□□□ -1.31
CTCFL-222ENST00000609232 TRBV6-8A0A0A6YYG3 113 aa6.85□□□□□ -1.31
CTCFL-222ENST00000609232 KRTAP10-11P60412 298 aa6.85□□□□□ -1.31
CTCFL-222ENST00000609232 LINC01561Q8N1V8 128 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms