RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 TOMM6Q96B49 74 aa6.28□□□□□ -1.4
CTSA-215ENST00000607187 URB1-AS1Q96HZ7 61 aa6.28□□□□□ -1.4
CTSA-215ENST00000607187 TIMM17AQ99595 171 aa6.28□□□□□ -1.4
CTSA-215ENST00000607187 HERC1Q15751 4861 aa6.28□□□□□ -1.4
CTSA-215ENST00000607187 LRP1Q07954 4544 aaKnown RBP6.28□□□□□ -1.4
CTSA-215ENST00000607187 SNAPINO95295 136 aa6.27□□□□□ -1.41
CTSA-215ENST00000607187 FABP9Q0Z7S8 132 aa6.27□□□□□ -1.41
CTSA-215ENST00000607187 NDUFA5Q16718 116 aa6.27□□□□□ -1.41
CTSA-215ENST00000607187 FAM19A3Q7Z5A8 133 aa6.27□□□□□ -1.41
CTSA-215ENST00000607187 MRPL35Q9NZE8 188 aaKnown RBP6.27□□□□□ -1.41
CTSA-215ENST00000607187 KRTAP29-1A8MX34 341 aaPredicted RBP6.26□□□□□ -1.41
CTSA-215ENST00000607187 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.26□□□□□ -1.41
CTSA-215ENST00000607187 NDUFA1O15239 70 aa6.26□□□□□ -1.41
CTSA-215ENST00000607187 HNRNPA3P51991 378 aaKnown RBP6.26□□□□□ -1.41
CTSA-215ENST00000607187 KIAA0087Q14695 138 aa6.26□□□□□ -1.41
CTSA-215ENST00000607187 ERASQ7Z444 233 aa6.26□□□□□ -1.41
CTSA-215ENST00000607187 LINC01561Q8N1V8 128 aa6.26□□□□□ -1.41
CTSA-215ENST00000607187 A0A0J9YXV3 536 aa6.25□□□□□ -1.41
CTSA-215ENST00000607187 LINC01549A6NIU2 74 aa6.25□□□□□ -1.41
CTSA-215ENST00000607187 C10orf25Q5T742 122 aa6.25□□□□□ -1.41
CTSA-215ENST00000607187 C7orf33Q8WU49 177 aa6.25□□□□□ -1.41
CTSA-215ENST00000607187 SCGB3A1Q96QR1 104 aa6.25□□□□□ -1.41
CTSA-215ENST00000607187 TRAPPC1Q9Y5R8 145 aa6.25□□□□□ -1.41
CTSA-215ENST00000607187 SEC11AP67812 179 aa6.24□□□□□ -1.41
CTSA-215ENST00000607187 UNQ6190/PRO20217Q6UXQ8 127 aa6.24□□□□□ -1.41
CTSA-215ENST00000607187 FA2HQ7L5A8 372 aa6.24□□□□□ -1.41
CTSA-215ENST00000607187 SMCO4Q9NRQ5 59 aa6.24□□□□□ -1.41
CTSA-215ENST00000607187 C6orf48Q9UBA6 75 aa6.24□□□□□ -1.41
CTSA-215ENST00000607187 TLX1NBP0CAT3 122 aa6.23□□□□□ -1.41
CTSA-215ENST00000607187 HERVK_113P63121 156 aa6.23□□□□□ -1.41
CTSA-215ENST00000607187 RPL18AQ02543 176 aaKnown RBP6.23□□□□□ -1.41
CTSA-215ENST00000607187 C18orf32Q8TCD1 76 aa6.23□□□□□ -1.41
CTSA-215ENST00000607187 YPEL4Q96NS1 127 aa6.23□□□□□ -1.41
CTSA-215ENST00000607187 FAT3Q8TDW7 4589 aa6.23□□□□□ -1.41
CTSA-215ENST00000607187 A0A1W2PNN7 141 aa6.22□□□□□ -1.41
CTSA-215ENST00000607187 OXTP01178 125 aa6.22□□□□□ -1.41
CTSA-215ENST00000607187 CST9LQ9H4G1 147 aa6.22□□□□□ -1.41
CTSA-215ENST00000607187 GEMIN7Q9H840 131 aaKnown RBP6.22□□□□□ -1.41
CTSA-215ENST00000607187 CDKN2A-AS1Q9UH64 79 aa6.22□□□□□ -1.41
CTSA-215ENST00000607187 TRBV30A0A0K0K1B3 111 aa6.21□□□□□ -1.42
CTSA-215ENST00000607187 TINCRA0A1B0GVN0 87 aa6.21□□□□□ -1.42
CTSA-215ENST00000607187 LINC00614P0C842 121 aa6.21□□□□□ -1.42
CTSA-215ENST00000607187 PRR3P79522 188 aaKnown RBP6.21□□□□□ -1.42
CTSA-215ENST00000607187 PMVKQ15126 192 aa6.21□□□□□ -1.42
CTSA-215ENST00000607187 C9orf116Q5BN46 136 aaPredicted RBP6.21□□□□□ -1.42
CTSA-215ENST00000607187 C2orf82Q6UX34 121 aa6.21□□□□□ -1.42
CTSA-215ENST00000607187 Q6ZRP5 223 aa6.21□□□□□ -1.42
CTSA-215ENST00000607187 MPLKIPQ8TAP9 179 aa6.21□□□□□ -1.42
CTSA-215ENST00000607187 IGLV5-45A0A087WSX0 123 aa6.2□□□□□ -1.42
CTSA-215ENST00000607187 A0A096LNJ9 63 aa6.2□□□□□ -1.42
CTSA-215ENST00000607187 ATP6V1G1O75348 118 aa6.2□□□□□ -1.42
CTSA-215ENST00000607187 PRSS2P07478 247 aa6.2□□□□□ -1.42
CTSA-215ENST00000607187 Q8IZM0 81 aa6.2□□□□□ -1.42
CTSA-215ENST00000607187 PACRGQ96M98 296 aaPredicted RBP6.2□□□□□ -1.42
CTSA-215ENST00000607187 TOMM7Q9P0U1 55 aa6.2□□□□□ -1.42
CTSA-215ENST00000607187 CKS1BP61024 79 aa6.19□□□□□ -1.42
CTSA-215ENST00000607187 C6orf226Q5I0X4 101 aa6.19□□□□□ -1.42
CTSA-215ENST00000607187 LINC00469Q8N7U9 141 aa6.19□□□□□ -1.42
CTSA-215ENST00000607187 SMIM1B2RUZ4 78 aa6.18□□□□□ -1.42
CTSA-215ENST00000607187 NDUFC2-KCTD14E9PQ53 114 aa6.18□□□□□ -1.42
CTSA-215ENST00000607187 HBDP02042 147 aa6.18□□□□□ -1.42
CTSA-215ENST00000607187 RAB5BP61020 215 aa6.18□□□□□ -1.42
CTSA-215ENST00000607187 CBLN2Q8IUK8 224 aa6.18□□□□□ -1.42
CTSA-215ENST00000607187 SLC7A5P1Q8MH63 180 aa6.18□□□□□ -1.42
CTSA-215ENST00000607187 IGLV5-39A0A0G2JS06 123 aa6.17□□□□□ -1.42
CTSA-215ENST00000607187 FAM168BA1KXE4 195 aa6.17□□□□□ -1.42
CTSA-215ENST00000607187 PMCHL1Q16048 86 aa6.17□□□□□ -1.42
CTSA-215ENST00000607187 PDZD11Q5EBL8 140 aa6.17□□□□□ -1.42
CTSA-215ENST00000607187 PHF5AQ7RTV0 110 aaKnown RBP6.17□□□□□ -1.42
CTSA-215ENST00000607187 F8VRH5 84 aa6.16□□□□□ -1.42
CTSA-215ENST00000607187 IGLC3P0DOY3 106 aa6.16□□□□□ -1.42
CTSA-215ENST00000607187 CXCL5P42830 114 aa6.16□□□□□ -1.42
CTSA-215ENST00000607187 C9orf129Q5T035 196 aaKnown RBP6.16□□□□□ -1.42
CTSA-215ENST00000607187 KRTAP7-1Q8IUC3 87 aa6.16□□□□□ -1.42
CTSA-215ENST00000607187 PSORS1C2Q9UIG4 136 aa6.16□□□□□ -1.42
CTSA-215ENST00000607187 ATP5LO75964 103 aa6.15□□□□□ -1.42
CTSA-215ENST00000607187 SPINK8P0C7L1 97 aa6.15□□□□□ -1.42
CTSA-215ENST00000607187 NDUFA6P56556 154 aa6.15□□□□□ -1.42
CTSA-215ENST00000607187 SRSF9Q13242 221 aaKnown RBP eCLIP6.15□□□□□ -1.42
CTSA-215ENST00000607187 SPINK6Q6UWN8 80 aa6.15□□□□□ -1.42
CTSA-215ENST00000607187 COX7B2Q8TF08 81 aa6.15□□□□□ -1.42
CTSA-215ENST00000607187 CHCHD1Q96BP2 118 aaKnown RBP6.15□□□□□ -1.42
CTSA-215ENST00000607187 A0A0U1RRA0 63 aa6.14□□□□□ -1.43
CTSA-215ENST00000607187 H3BRM9 83 aa6.14□□□□□ -1.43
CTSA-215ENST00000607187 MT1HL1P0DM35 61 aa6.14□□□□□ -1.43
CTSA-215ENST00000607187 FAM19A5Q7Z5A7 132 aaPredicted RBP6.14□□□□□ -1.43
CTSA-215ENST00000607187 TNXBP22105 4242 aa6.13□□□□□ -1.43
CTSA-215ENST00000607187 ZNF22P17026 224 aaPredicted RBP6.13□□□□□ -1.43
CTSA-215ENST00000607187 BAGE3Q86Y29 109 aa6.13□□□□□ -1.43
CTSA-215ENST00000607187 M0QXV9 152 aa6.12□□□□□ -1.43
CTSA-215ENST00000607187 TRGC2P03986 189 aa6.12□□□□□ -1.43
CTSA-215ENST00000607187 C1orf137Q5JT78 98 aa6.12□□□□□ -1.43
CTSA-215ENST00000607187 KRTAP11-1Q8IUC1 163 aa6.12□□□□□ -1.43
CTSA-215ENST00000607187 XAGE1AQ9HD64 81 aa6.12□□□□□ -1.43
CTSA-215ENST00000607187 C11orf86A6NJI1 115 aa6.11□□□□□ -1.43
CTSA-215ENST00000607187 IFI27L1Q96BM0 104 aa6.11□□□□□ -1.43
CTSA-215ENST00000607187 LINC01600Q96MT4 127 aa6.11□□□□□ -1.43
CTSA-215ENST00000607187 TRAV12-1A0A0B4J245 112 aa6.1□□□□□ -1.43
CTSA-215ENST00000607187 COLCA2A8K830 154 aa6.1□□□□□ -1.43
CTSA-215ENST00000607187 HSBP1O75506 76 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms