RNA–Protein interactions for RNA: ENST00000605166.1

HMGB1P51-201, Transcript of high mobility group box 1 pseudogene 51, humanhuman

BASIC

Gene HMGB1P51, Length 638 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P51-201ENST00000605166 KNDC1Q76NI1 1749 aa0.56□□□□□ -2.32
HMGB1P51-201ENST00000605166 KMT2DO14686 5537 aa0.56□□□□□ -2.32
HMGB1P51-201ENST00000605166 ETDBQ3ZM63 59 aa0.56□□□□□ -2.32
HMGB1P51-201ENST00000605166 BAZ1AQ9NRL2 1556 aaPredicted RBP0.56□□□□□ -2.32
HMGB1P51-201ENST00000605166 PIEZO1Q92508 2521 aa0.56□□□□□ -2.32
HMGB1P51-201ENST00000605166 A0A1B0GU69 56 aa0.55□□□□□ -2.32
HMGB1P51-201ENST00000605166 COX6B1P14854 86 aa0.55□□□□□ -2.32
HMGB1P51-201ENST00000605166 C6orf201Q7Z4U5 140 aa0.55□□□□□ -2.32
HMGB1P51-201ENST00000605166 V9GYS6 101 aa0.55□□□□□ -2.32
HMGB1P51-201ENST00000605166 SHPRHQ149N8 1683 aa0.55□□□□□ -2.32
HMGB1P51-201ENST00000605166 F8P00451 2351 aa0.54□□□□□ -2.32
HMGB1P51-201ENST00000605166 PPRC1Q5VV67 1664 aaKnown RBP0.54□□□□□ -2.32
HMGB1P51-201ENST00000605166 ATP10BO94823 1461 aa0.54□□□□□ -2.32
HMGB1P51-201ENST00000605166 IQSEC2Q5JU85 1478 aa0.54□□□□□ -2.32
HMGB1P51-201ENST00000605166 TARBP1Q13395 1621 aaKnown RBP0.53□□□□□ -2.32
HMGB1P51-201ENST00000605166 PAPPA2Q9BXP8 1791 aa0.53□□□□□ -2.32
HMGB1P51-201ENST00000605166 F8WEM9 126 aa0.53□□□□□ -2.32
HMGB1P51-201ENST00000605166 SPRR1AP35321 89 aa0.53□□□□□ -2.32
HMGB1P51-201ENST00000605166 GNGT1P63211 74 aa0.53□□□□□ -2.32
HMGB1P51-201ENST00000605166 DEFB109BQ30KR1 87 aa0.53□□□□□ -2.32
HMGB1P51-201ENST00000605166 ALKAL2Q6UX46 152 aa0.53□□□□□ -2.32
HMGB1P51-201ENST00000605166 C20orf78Q9BR46 151 aa0.53□□□□□ -2.32
HMGB1P51-201ENST00000605166 PSENENQ9NZ42 101 aa0.53□□□□□ -2.32
HMGB1P51-201ENST00000605166 HIGD1BQ9P298 99 aa0.53□□□□□ -2.32
HMGB1P51-201ENST00000605166 SMARCA2P51531 1590 aa0.53□□□□□ -2.33
HMGB1P51-201ENST00000605166 CHD9Q3L8U1 2897 aa0.52□□□□□ -2.33
HMGB1P51-201ENST00000605166 K7EQZ3 153 aa0.51□□□□□ -2.33
HMGB1P51-201ENST00000605166 EDC4Q6P2E9 1401 aaKnown RBP0.51□□□□□ -2.33
HMGB1P51-201ENST00000605166 MON2Q7Z3U7 1717 aa0.51□□□□□ -2.33
HMGB1P51-201ENST00000605166 SYNE1Q8NF91 8797 aaKnown RBP0.51□□□□□ -2.33
HMGB1P51-201ENST00000605166 SPTBN2O15020 2390 aa0.49□□□□□ -2.33
HMGB1P51-201ENST00000605166 PTPRZ1P23471 2315 aaPredicted RBP0.49□□□□□ -2.33
HMGB1P51-201ENST00000605166 D6R8Y8 96 aa0.49□□□□□ -2.33
HMGB1P51-201ENST00000605166 LEPROTL1O95214 131 aa0.49□□□□□ -2.33
HMGB1P51-201ENST00000605166 MUSTN1Q8IVN3 82 aa0.49□□□□□ -2.33
HMGB1P51-201ENST00000605166 USMG5Q96IX5 58 aa0.49□□□□□ -2.33
HMGB1P51-201ENST00000605166 IGF2RP11717 2491 aa0.49□□□□□ -2.33
HMGB1P51-201ENST00000605166 C2CD3Q4AC94 2353 aa0.49□□□□□ -2.33
HMGB1P51-201ENST00000605166 OTOGQ6ZRI0 2925 aa0.49□□□□□ -2.33
HMGB1P51-201ENST00000605166 PLCE1Q9P212 2302 aa0.49□□□□□ -2.33
HMGB1P51-201ENST00000605166 KIAA0556O60303 1618 aa0.49□□□□□ -2.33
HMGB1P51-201ENST00000605166 CUX1P39880 1505 aa0.48□□□□□ -2.33
HMGB1P51-201ENST00000605166 CEP162Q5TB80 1403 aa0.48□□□□□ -2.33
HMGB1P51-201ENST00000605166 PYY3Q5JQD4 70 aa0.48□□□□□ -2.33
HMGB1P51-201ENST00000605166 ZFYVE26Q68DK2 2539 aa0.48□□□□□ -2.33
HMGB1P51-201ENST00000605166 SPRR1BP22528 89 aa0.47□□□□□ -2.33
HMGB1P51-201ENST00000605166 SMIM11AP58511 58 aa0.47□□□□□ -2.33
HMGB1P51-201ENST00000605166 CCDC141Q6ZP82 1450 aa0.47□□□□□ -2.33
HMGB1P51-201ENST00000605166 C5P01031 1676 aa0.46□□□□□ -2.34
HMGB1P51-201ENST00000605166 USF3Q68DE3 2245 aa0.46□□□□□ -2.34
HMGB1P51-201ENST00000605166 MDN1Q9NU22 5596 aa0.46□□□□□ -2.34
HMGB1P51-201ENST00000605166 GOLGA4Q13439 2230 aaKnown RBP0.45□□□□□ -2.34
HMGB1P51-201ENST00000605166 PVALEFA0A1B0GWK0 134 aa0.45□□□□□ -2.34
HMGB1P51-201ENST00000605166 MYO3AQ8NEV4 1616 aa0.45□□□□□ -2.34
HMGB1P51-201ENST00000605166 KIAA1551Q9HCM1 1747 aa0.44□□□□□ -2.34
HMGB1P51-201ENST00000605166 ABCC3O15438 1527 aa0.44□□□□□ -2.34
HMGB1P51-201ENST00000605166 TSC2P49815 1807 aa0.44□□□□□ -2.34
HMGB1P51-201ENST00000605166 GNG2P59768 71 aa0.44□□□□□ -2.34
HMGB1P51-201ENST00000605166 PEA15Q15121 130 aa0.44□□□□□ -2.34
HMGB1P51-201ENST00000605166 SAMD9Q5K651 1589 aa0.44□□□□□ -2.34
HMGB1P51-201ENST00000605166 ZNF292O60281 2723 aa0.44□□□□□ -2.34
HMGB1P51-201ENST00000605166 RGPD4Q7Z3J3 1758 aa0.43□□□□□ -2.34
HMGB1P51-201ENST00000605166 MYH4Q9Y623 1939 aa0.43□□□□□ -2.34
HMGB1P51-201ENST00000605166 HMGN2P05204 90 aaKnown RBP0.43□□□□□ -2.34
HMGB1P51-201ENST00000605166 COX8AP10176 69 aa0.43□□□□□ -2.34
HMGB1P51-201ENST00000605166 CRYBG1Q9Y4K1 1723 aa0.43□□□□□ -2.34
HMGB1P51-201ENST00000605166 FSIP2Q5CZC0 6907 aa0.43□□□□□ -2.34
HMGB1P51-201ENST00000605166 SYNE2Q8WXH0 6885 aaKnown RBP0.43□□□□□ -2.34
HMGB1P51-201ENST00000605166 SLIT1O75093 1534 aa0.43□□□□□ -2.34
HMGB1P51-201ENST00000605166 FAT4Q6V0I7 4981 aa0.43□□□□□ -2.34
HMGB1P51-201ENST00000605166 DNAJC13O75165 2243 aa0.42□□□□□ -2.34
HMGB1P51-201ENST00000605166 LRP1Q07954 4544 aaKnown RBP0.42□□□□□ -2.34
HMGB1P51-201ENST00000605166 K7EP34 96 aa0.42□□□□□ -2.34
HMGB1P51-201ENST00000605166 MAST4O15021 2626 aa0.42□□□□□ -2.34
HMGB1P51-201ENST00000605166 LRRC37AA6NMS7 1700 aa0.41□□□□□ -2.34
HMGB1P51-201ENST00000605166 C9orf62Q8N4C0 152 aa0.41□□□□□ -2.34
HMGB1P51-201ENST00000605166 UBE2D4Q9Y2X8 147 aa0.41□□□□□ -2.34
HMGB1P51-201ENST00000605166 PLIN4Q96Q06 1357 aa0.4□□□□□ -2.35
HMGB1P51-201ENST00000605166 IGSF10Q6WRI0 2623 aa0.39□□□□□ -2.35
HMGB1P51-201ENST00000605166 ANKRD36A6QL64 1941 aa0.39□□□□□ -2.35
HMGB1P51-201ENST00000605166 IGLC2P0DOY2 106 aa0.39□□□□□ -2.35
HMGB1P51-201ENST00000605166 IGLC3P0DOY3 106 aa0.39□□□□□ -2.35
HMGB1P51-201ENST00000605166 CRIPTQ9P021 101 aa0.39□□□□□ -2.35
HMGB1P51-201ENST00000605166 RGPD3A6NKT7 1758 aaPredicted RBP0.39□□□□□ -2.35
HMGB1P51-201ENST00000605166 UBR1Q8IWV7 1749 aa0.38□□□□□ -2.35
HMGB1P51-201ENST00000605166 S100A16Q96FQ6 103 aaKnown RBP0.38□□□□□ -2.35
HMGB1P51-201ENST00000605166 FMN2Q9NZ56 1722 aa0.38□□□□□ -2.35
HMGB1P51-201ENST00000605166 CSMD3Q7Z407 3707 aa0.37□□□□□ -2.35
HMGB1P51-201ENST00000605166 NMSQ5H8A3 153 aa0.37□□□□□ -2.35
HMGB1P51-201ENST00000605166 CYB5AP00167 134 aa0.36□□□□□ -2.35
HMGB1P51-201ENST00000605166 NEXMIFQ5QGS0 1516 aa0.36□□□□□ -2.35
HMGB1P51-201ENST00000605166 NKTRP30414 1462 aaKnown RBP0.35□□□□□ -2.35
HMGB1P51-201ENST00000605166 UNC79Q9P2D8 2635 aa0.35□□□□□ -2.35
HMGB1P51-201ENST00000605166 PIEZO2Q9H5I5 2752 aa0.34□□□□□ -2.35
HMGB1P51-201ENST00000605166 I3L3M4 83 aa0.34□□□□□ -2.36
HMGB1P51-201ENST00000605166 SPINK4O60575 86 aa0.34□□□□□ -2.36
HMGB1P51-201ENST00000605166 DEFB105AQ8NG35 78 aa0.34□□□□□ -2.36
HMGB1P51-201ENST00000605166 RABAC1Q9UI14 185 aa0.34□□□□□ -2.36
HMGB1P51-201ENST00000605166 NCOR2Q9Y618 2525 aa0.34□□□□□ -2.36
HMGB1P51-201ENST00000605166 ALKQ9UM73 1620 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms