RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 LINC00614P0C842 121 aa9.02□□□□□ -0.97
TUBE1-208ENST00000604743 PMCHL1Q16048 86 aa9.02□□□□□ -0.97
TUBE1-208ENST00000604743 GAGE2EQ4V326 116 aa9.02□□□□□ -0.97
TUBE1-208ENST00000604743 C9orf116Q5BN46 136 aaPredicted RBP9.02□□□□□ -0.97
TUBE1-208ENST00000604743 C6orf226Q5I0X4 101 aa9.02□□□□□ -0.97
TUBE1-208ENST00000604743 LINC00469Q8N7U9 141 aa9.02□□□□□ -0.97
TUBE1-208ENST00000604743 GAGE2DQ9UEU5 116 aa9.02□□□□□ -0.97
TUBE1-208ENST00000604743 SCO1O75880 301 aa9.01□□□□□ -0.97
TUBE1-208ENST00000604743 NDUFA6P56556 154 aa9.01□□□□□ -0.97
TUBE1-208ENST00000604743 CKS1BP61024 79 aa9.01□□□□□ -0.97
TUBE1-208ENST00000604743 Q6ZRP5 223 aa9.01□□□□□ -0.97
TUBE1-208ENST00000604743 CST9LQ9H4G1 147 aa9.01□□□□□ -0.97
TUBE1-208ENST00000604743 TINCRA0A1B0GVN0 87 aa9□□□□□ -0.97
TUBE1-208ENST00000604743 COLCA2A8K830 154 aa9□□□□□ -0.97
TUBE1-208ENST00000604743 PMVKQ15126 192 aa9□□□□□ -0.97
TUBE1-208ENST00000604743 A0A096LNJ9 63 aa8.99□□□□□ -0.97
TUBE1-208ENST00000604743 TRBV30A0A0K0K1B3 111 aa8.99□□□□□ -0.97
TUBE1-208ENST00000604743 HBDP02042 147 aa8.99□□□□□ -0.97
TUBE1-208ENST00000604743 RAB5BP61020 215 aa8.99□□□□□ -0.97
TUBE1-208ENST00000604743 PRR3P79522 188 aaKnown RBP8.99□□□□□ -0.97
TUBE1-208ENST00000604743 Q8IZM0 81 aa8.99□□□□□ -0.97
TUBE1-208ENST00000604743 FAM168BA1KXE4 195 aa8.98□□□□□ -0.97
TUBE1-208ENST00000604743 TLX1NBP0CAT3 122 aa8.98□□□□□ -0.97
TUBE1-208ENST00000604743 PHF5AQ7RTV0 110 aaKnown RBP8.98□□□□□ -0.97
TUBE1-208ENST00000604743 OXTP01178 125 aa8.97□□□□□ -0.97
TUBE1-208ENST00000604743 SPINK8P0C7L1 97 aa8.97□□□□□ -0.97
TUBE1-208ENST00000604743 FAM19A5Q7Z5A7 132 aaPredicted RBP8.97□□□□□ -0.97
TUBE1-208ENST00000604743 SMIM1B2RUZ4 78 aa8.96□□□□□ -0.98
TUBE1-208ENST00000604743 NDUFC2-KCTD14E9PQ53 114 aa8.96□□□□□ -0.98
TUBE1-208ENST00000604743 TRGC2P03986 189 aa8.96□□□□□ -0.98
TUBE1-208ENST00000604743 IGLV5-45A0A087WSX0 123 aa8.95□□□□□ -0.98
TUBE1-208ENST00000604743 PDZD11Q5EBL8 140 aa8.95□□□□□ -0.98
TUBE1-208ENST00000604743 COX7B2Q8TF08 81 aa8.95□□□□□ -0.98
TUBE1-208ENST00000604743 F8VRH5 84 aa8.93□□□□□ -0.98
TUBE1-208ENST00000604743 H3BRM9 83 aa8.93□□□□□ -0.98
TUBE1-208ENST00000604743 ATP5LO75964 103 aa8.93□□□□□ -0.98
TUBE1-208ENST00000604743 IGLC3P0DOY3 106 aa8.93□□□□□ -0.98
TUBE1-208ENST00000604743 C9orf129Q5T035 196 aaKnown RBP8.93□□□□□ -0.98
TUBE1-208ENST00000604743 BAGE3Q86Y29 109 aa8.93□□□□□ -0.98
TUBE1-208ENST00000604743 CXCL5P42830 114 aa8.92□□□□□ -0.98
TUBE1-208ENST00000604743 CHCHD1Q96BP2 118 aaKnown RBP8.92□□□□□ -0.98
TUBE1-208ENST00000604743 PSORS1C2Q9UIG4 136 aa8.92□□□□□ -0.98
TUBE1-208ENST00000604743 C1orf137Q5JT78 98 aa8.91□□□□□ -0.98
TUBE1-208ENST00000604743 XAGE1AQ9HD64 81 aa8.91□□□□□ -0.98
TUBE1-208ENST00000604743 M0QXV9 152 aa8.9□□□□□ -0.98
TUBE1-208ENST00000604743 ZNF22P17026 224 aaPredicted RBP8.9□□□□□ -0.98
TUBE1-208ENST00000604743 KRTAP7-1Q8IUC3 87 aa8.9□□□□□ -0.98
TUBE1-208ENST00000604743 HSBP1O75506 76 aa8.89□□□□□ -0.99
TUBE1-208ENST00000604743 UBE2BP63146 152 aa8.89□□□□□ -0.99
TUBE1-208ENST00000604743 SPINK6Q6UWN8 80 aa8.89□□□□□ -0.99
TUBE1-208ENST00000604743 FAM19A2Q8N3H0 131 aa8.89□□□□□ -0.99
TUBE1-208ENST00000604743 CHTOPQ9Y3Y2 248 aaKnown RBP8.89□□□□□ -0.99
TUBE1-208ENST00000604743 C11orf86A6NJI1 115 aa8.88□□□□□ -0.99
TUBE1-208ENST00000604743 TMEM170BQ5T4T1 132 aa8.88□□□□□ -0.99
TUBE1-208ENST00000604743 KRTAP11-1Q8IUC1 163 aa8.88□□□□□ -0.99
TUBE1-208ENST00000604743 IFI27L1Q96BM0 104 aa8.88□□□□□ -0.99
TUBE1-208ENST00000604743 SRSF9Q13242 221 aaKnown RBP eCLIP8.87□□□□□ -0.99
TUBE1-208ENST00000604743 SERTAD4-AS1Q5TG53 156 aa8.87□□□□□ -0.99
TUBE1-208ENST00000604743 IGLV5-39A0A0G2JS06 123 aa8.85□□□□□ -0.99
TUBE1-208ENST00000604743 H0Y8G0 127 aa8.85□□□□□ -0.99
TUBE1-208ENST00000604743 HIST1H2BKO60814 126 aa8.85□□□□□ -0.99
TUBE1-208ENST00000604743 HIST1H2BJP06899 126 aa8.85□□□□□ -0.99
TUBE1-208ENST00000604743 HIST1H2BOP23527 126 aa8.85□□□□□ -0.99
TUBE1-208ENST00000604743 HIST1H2BBP33778 126 aa8.85□□□□□ -0.99
TUBE1-208ENST00000604743 HIST1H2BDP58876 126 aa8.85□□□□□ -0.99
TUBE1-208ENST00000604743 HIST1H2BCP62807 126 aa8.85□□□□□ -0.99
TUBE1-208ENST00000604743 HIST2H2BEQ16778 126 aa8.85□□□□□ -0.99
TUBE1-208ENST00000604743 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.85□□□□□ -0.99
TUBE1-208ENST00000604743 HIST1H2BHQ93079 126 aa8.85□□□□□ -0.99
TUBE1-208ENST00000604743 HIST1H2BNQ99877 126 aa8.85□□□□□ -0.99
TUBE1-208ENST00000604743 HIST1H2BMQ99879 126 aa8.85□□□□□ -0.99
TUBE1-208ENST00000604743 C22orf24Q9Y442 160 aa8.85□□□□□ -0.99
TUBE1-208ENST00000604743 SERF1AO75920 110 aa8.84□□□□□ -0.99
TUBE1-208ENST00000604743 MT1HL1P0DM35 61 aa8.84□□□□□ -0.99
TUBE1-208ENST00000604743 PFN2P35080 140 aa8.84□□□□□ -0.99
TUBE1-208ENST00000604743 REG3GQ6UW15 175 aa8.84□□□□□ -0.99
TUBE1-208ENST00000604743 ZNF625Q96I27 306 aaPredicted RBP8.84□□□□□ -0.99
TUBE1-208ENST00000604743 TRAV12-1A0A0B4J245 112 aa8.83□□□□□ -1
TUBE1-208ENST00000604743 IGLV7-43P04211 117 aa8.83□□□□□ -1
TUBE1-208ENST00000604743 LINC00310P59036 64 aa8.82□□□□□ -1
TUBE1-208ENST00000604743 LINC01600Q96MT4 127 aa8.82□□□□□ -1
TUBE1-208ENST00000604743 NUPR1O60356 82 aa8.81□□□□□ -1
TUBE1-208ENST00000604743 LEPROTL1O95214 131 aa8.81□□□□□ -1
TUBE1-208ENST00000604743 FABP4P15090 132 aa8.81□□□□□ -1
TUBE1-208ENST00000604743 LBHQ53QV2 105 aaPredicted RBP8.81□□□□□ -1
TUBE1-208ENST00000604743 TNXBP22105 4242 aa8.81□□□□□ -1
TUBE1-208ENST00000604743 TMEM223A0PJW6 202 aa8.8□□□□□ -1
TUBE1-208ENST00000604743 S100A6P06703 90 aa8.8□□□□□ -1
TUBE1-208ENST00000604743 ERG28Q9UKR5 140 aa8.8□□□□□ -1
TUBE1-208ENST00000604743 MRPL55Q7Z7F7 128 aaKnown RBP8.79□□□□□ -1
TUBE1-208ENST00000604743 HSPB8Q9UJY1 196 aa8.79□□□□□ -1
TUBE1-208ENST00000604743 GAGE10A6NGK3 116 aa8.78□□□□□ -1
TUBE1-208ENST00000604743 RPL37AP8A6NKH3 93 aa8.78□□□□□ -1
TUBE1-208ENST00000604743 COA6Q5JTJ3 125 aaKnown RBP8.78□□□□□ -1
TUBE1-208ENST00000604743 DIRC1Q969H9 104 aa8.78□□□□□ -1
TUBE1-208ENST00000604743 ODF1Q14990 250 aa8.77□□□□□ -1.01
TUBE1-208ENST00000604743 NKAPP1Q8N9T2 125 aa8.77□□□□□ -1.01
TUBE1-208ENST00000604743 LINC00167Q96N53 147 aa8.77□□□□□ -1.01
TUBE1-208ENST00000604743 TP73-AS1Q9UF72 201 aa8.77□□□□□ -1.01
TUBE1-208ENST00000604743 PLA2G2DQ9UNK4 145 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms