RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 C6orf226Q5I0X4 101 aa6.66□□□□□ -1.34
PDLIM1P1-201ENST00000604187 LINC01561Q8N1V8 128 aa6.66□□□□□ -1.34
PDLIM1P1-201ENST00000604187 C3orf22Q8N5N4 141 aa6.66□□□□□ -1.34
PDLIM1P1-201ENST00000604187 KRTAP19-1Q8IUB9 90 aa6.65□□□□□ -1.34
PDLIM1P1-201ENST00000604187 Q8IZM0 81 aa6.65□□□□□ -1.34
PDLIM1P1-201ENST00000604187 ALKBH7Q9BT30 221 aaPredicted RBP6.65□□□□□ -1.34
PDLIM1P1-201ENST00000604187 LINC00862A6NCI5 91 aa6.64□□□□□ -1.35
PDLIM1P1-201ENST00000604187 F8VRH5 84 aa6.64□□□□□ -1.35
PDLIM1P1-201ENST00000604187 PRLHP81277 87 aa6.64□□□□□ -1.35
PDLIM1P1-201ENST00000604187 PNRC1Q12796 327 aaPredicted RBP6.64□□□□□ -1.35
PDLIM1P1-201ENST00000604187 Q6ZN92 141 aa6.64□□□□□ -1.35
PDLIM1P1-201ENST00000604187 TEX43Q6ZNM6 134 aa6.64□□□□□ -1.35
PDLIM1P1-201ENST00000604187 LINC01551Q86U37 167 aa6.64□□□□□ -1.35
PDLIM1P1-201ENST00000604187 TMEM141Q96I45 108 aa6.64□□□□□ -1.35
PDLIM1P1-201ENST00000604187 NPYP01303 97 aa6.63□□□□□ -1.35
PDLIM1P1-201ENST00000604187 SPAG11AQ6PDA7 123 aa6.63□□□□□ -1.35
PDLIM1P1-201ENST00000604187 OSTCQ9NRP0 149 aa6.63□□□□□ -1.35
PDLIM1P1-201ENST00000604187 PYGO1Q9Y3Y4 419 aa6.63□□□□□ -1.35
PDLIM1P1-201ENST00000604187 IGKV2-28A0A075B6P5 120 aa6.62□□□□□ -1.35
PDLIM1P1-201ENST00000604187 D6R8Y8 96 aa6.62□□□□□ -1.35
PDLIM1P1-201ENST00000604187 IGKV2D-28P01615 120 aa6.62□□□□□ -1.35
PDLIM1P1-201ENST00000604187 MT1HP80294 61 aa6.62□□□□□ -1.35
PDLIM1P1-201ENST00000604187 ZC2HC1BQ5TFG8 222 aa6.62□□□□□ -1.35
PDLIM1P1-201ENST00000604187 NKAPP1Q8N9T2 125 aa6.62□□□□□ -1.35
PDLIM1P1-201ENST00000604187 SMIM7Q9BQ49 75 aa6.62□□□□□ -1.35
PDLIM1P1-201ENST00000604187 C2orf88Q9BSF0 95 aa6.62□□□□□ -1.35
PDLIM1P1-201ENST00000604187 EIF5A2Q9GZV4 153 aaKnown RBP6.62□□□□□ -1.35
PDLIM1P1-201ENST00000604187 NAT8BQ9UHF3 227 aa6.62□□□□□ -1.35
PDLIM1P1-201ENST00000604187 V9GYV3 84 aa6.62□□□□□ -1.35
PDLIM1P1-201ENST00000604187 CFC1BP0CG36 223 aa6.61□□□□□ -1.35
PDLIM1P1-201ENST00000604187 RAB5AP20339 215 aa6.61□□□□□ -1.35
PDLIM1P1-201ENST00000604187 LINC00310P59036 64 aa6.61□□□□□ -1.35
PDLIM1P1-201ENST00000604187 LCE3BQ5TA77 95 aa6.61□□□□□ -1.35
PDLIM1P1-201ENST00000604187 IGLV5-37A0A075B6J1 123 aa6.6□□□□□ -1.35
PDLIM1P1-201ENST00000604187 SCO1O75880 301 aa6.6□□□□□ -1.35
PDLIM1P1-201ENST00000604187 RGS21Q2M5E4 152 aa6.6□□□□□ -1.35
PDLIM1P1-201ENST00000604187 FAM19A1Q7Z5A9 133 aa6.6□□□□□ -1.35
PDLIM1P1-201ENST00000604187 KRTAP19-2Q3LHN2 52 aa6.59□□□□□ -1.35
PDLIM1P1-201ENST00000604187 PLEKHB2Q96CS7 222 aa6.59□□□□□ -1.35
PDLIM1P1-201ENST00000604187 KRTAP9-7A8MTY7 169 aa6.58□□□□□ -1.36
PDLIM1P1-201ENST00000604187 TMEM238C9JI98 176 aa6.58□□□□□ -1.36
PDLIM1P1-201ENST00000604187 FAM74A3Q4VXF1 159 aa6.58□□□□□ -1.36
PDLIM1P1-201ENST00000604187 TMEM126AQ9H061 195 aa6.58□□□□□ -1.36
PDLIM1P1-201ENST00000604187 VCX2Q9H322 139 aa6.58□□□□□ -1.36
PDLIM1P1-201ENST00000604187 BATF3Q9NR55 127 aa6.58□□□□□ -1.36
PDLIM1P1-201ENST00000604187 CDKN2A-AS1Q9UH64 79 aa6.58□□□□□ -1.36
PDLIM1P1-201ENST00000604187 A0A1B0GW15 77 aa6.57□□□□□ -1.36
PDLIM1P1-201ENST00000604187 CXCL5P42830 114 aa6.57□□□□□ -1.36
PDLIM1P1-201ENST00000604187 DAND5Q8N907 189 aa6.57□□□□□ -1.36
PDLIM1P1-201ENST00000604187 USH2AO75445 5202 aa6.56□□□□□ -1.36
PDLIM1P1-201ENST00000604187 PPBPP02775 128 aa6.56□□□□□ -1.36
PDLIM1P1-201ENST00000604187 KRTAP19-4Q3LI73 84 aa6.56□□□□□ -1.36
PDLIM1P1-201ENST00000604187 MRPL54Q6P161 138 aaKnown RBP6.56□□□□□ -1.36
PDLIM1P1-201ENST00000604187 SLC51BQ86UW2 128 aa6.56□□□□□ -1.36
PDLIM1P1-201ENST00000604187 Q8NBF4 154 aa6.56□□□□□ -1.36
PDLIM1P1-201ENST00000604187 AMELXQ99217 191 aa6.56□□□□□ -1.36
PDLIM1P1-201ENST00000604187 CYSLTR1Q9Y271 337 aa6.56□□□□□ -1.36
PDLIM1P1-201ENST00000604187 A0A1B0GVG6 124 aa6.55□□□□□ -1.36
PDLIM1P1-201ENST00000604187 SMIM27A0A1W2PRY6 76 aa6.55□□□□□ -1.36
PDLIM1P1-201ENST00000604187 F8W036 122 aa6.55□□□□□ -1.36
PDLIM1P1-201ENST00000604187 KRTAP10-6P60371 365 aaPredicted RBP6.55□□□□□ -1.36
PDLIM1P1-201ENST00000604187 RAB5BP61020 215 aa6.55□□□□□ -1.36
PDLIM1P1-201ENST00000604187 HERVK_113P63121 156 aa6.55□□□□□ -1.36
PDLIM1P1-201ENST00000604187 C2orf66Q6UXQ4 117 aa6.55□□□□□ -1.36
PDLIM1P1-201ENST00000604187 FAM19A3Q7Z5A8 133 aa6.55□□□□□ -1.36
PDLIM1P1-201ENST00000604187 CBLN2Q8IUK8 224 aa6.55□□□□□ -1.36
PDLIM1P1-201ENST00000604187 ORMDL3Q8N138 153 aa6.55□□□□□ -1.36
PDLIM1P1-201ENST00000604187 HIGD2AQ9BW72 106 aa6.55□□□□□ -1.36
PDLIM1P1-201ENST00000604187 SSPOA2VEC9 5147 aa6.54□□□□□ -1.36
PDLIM1P1-201ENST00000604187 M0R378 163 aa6.54□□□□□ -1.36
PDLIM1P1-201ENST00000604187 S100A8P05109 93 aa6.54□□□□□ -1.36
PDLIM1P1-201ENST00000604187 PRELID3AQ96N28 172 aa6.54□□□□□ -1.36
PDLIM1P1-201ENST00000604187 SPRR4Q96PI1 79 aa6.54□□□□□ -1.36
PDLIM1P1-201ENST00000604187 GEMIN7Q9H840 131 aaKnown RBP6.54□□□□□ -1.36
PDLIM1P1-201ENST00000604187 NDUFA12Q9UI09 145 aa6.54□□□□□ -1.36
PDLIM1P1-201ENST00000604187 LOC389332A0A1B0GUA5 103 aa6.53□□□□□ -1.36
PDLIM1P1-201ENST00000604187 SMIM1B2RUZ4 78 aa6.53□□□□□ -1.36
PDLIM1P1-201ENST00000604187 TMEM136Q6ZRR5 245 aa6.53□□□□□ -1.36
PDLIM1P1-201ENST00000604187 GNB1LQ9BYB4 327 aa6.53□□□□□ -1.36
PDLIM1P1-201ENST00000604187 A0A1B0GXF2 115 aa6.52□□□□□ -1.37
PDLIM1P1-201ENST00000604187 SPINK1P00995 79 aa6.52□□□□□ -1.37
PDLIM1P1-201ENST00000604187 SEC11AP67812 179 aa6.52□□□□□ -1.37
PDLIM1P1-201ENST00000604187 BLOC1S1P78537 153 aa6.52□□□□□ -1.37
PDLIM1P1-201ENST00000604187 ADIRFQ15847 76 aa6.52□□□□□ -1.37
PDLIM1P1-201ENST00000604187 C21orf62-AS1Q17RA5 79 aa6.52□□□□□ -1.37
PDLIM1P1-201ENST00000604187 COX7B2Q8TF08 81 aa6.52□□□□□ -1.37
PDLIM1P1-201ENST00000604187 SYNE2Q8WXH0 6885 aaKnown RBP6.52□□□□□ -1.37
PDLIM1P1-201ENST00000604187 IGIPA6NJ69 53 aa6.51□□□□□ -1.37
PDLIM1P1-201ENST00000604187 RPL23P62829 140 aaKnown RBP6.51□□□□□ -1.37
PDLIM1P1-201ENST00000604187 SRP19P09132 144 aaKnown RBP6.5□□□□□ -1.37
PDLIM1P1-201ENST00000604187 NPSP0C0P6 89 aa6.5□□□□□ -1.37
PDLIM1P1-201ENST00000604187 VPREB1P12018 145 aa6.5□□□□□ -1.37
PDLIM1P1-201ENST00000604187 ALKAL2Q6UX46 152 aa6.5□□□□□ -1.37
PDLIM1P1-201ENST00000604187 ZNF706Q9Y5V0 76 aaPredicted RBP6.5□□□□□ -1.37
PDLIM1P1-201ENST00000604187 PDZD11Q5EBL8 140 aa6.49□□□□□ -1.37
PDLIM1P1-201ENST00000604187 FAM19A2Q8N3H0 131 aa6.49□□□□□ -1.37
PDLIM1P1-201ENST00000604187 MAP1LC3AQ9H492 121 aa6.49□□□□□ -1.37
PDLIM1P1-201ENST00000604187 M0R2T5 61 aa6.48□□□□□ -1.37
PDLIM1P1-201ENST00000604187 PFN2P35080 140 aa6.48□□□□□ -1.37
PDLIM1P1-201ENST00000604187 ORMDL2Q53FV1 153 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms