RNA–Protein interactions for RNA: ENST00000602204.1

SIN3B-212, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2

Gene SIN3B, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-212ENST00000602204 C2orf48Q96LS8 159 aa13.08□□□□□ -0.32
SIN3B-212ENST00000602204 LYSTQ99698 3801 aa13.08□□□□□ -0.32
SIN3B-212ENST00000602204 ZNF561-AS1K7EIQ3 104 aa13.07□□□□□ -0.32
SIN3B-212ENST00000602204 LY6G6CO95867 125 aa13.07□□□□□ -0.32
SIN3B-212ENST00000602204 HSD52Q0P140 79 aa13.07□□□□□ -0.32
SIN3B-212ENST00000602204 CIRBPQ14011 172 aaKnown RBP13.07□□□□□ -0.32
SIN3B-212ENST00000602204 NTN5Q8WTR8 489 aaPredicted RBP13.07□□□□□ -0.32
SIN3B-212ENST00000602204 ALMS1Q8TCU4 4167 aa13.07□□□□□ -0.32
SIN3B-212ENST00000602204 DNAH6Q9C0G6 4158 aa13.05□□□□□ -0.32
SIN3B-212ENST00000602204 Q6ZVH6 145 aa13.05□□□□□ -0.32
SIN3B-212ENST00000602204 USP17L23D6RBM5 183 aa13.04□□□□□ -0.32
SIN3B-212ENST00000602204 PSCAO43653 123 aa13.04□□□□□ -0.32
SIN3B-212ENST00000602204 LITAFQ99732 161 aa13.04□□□□□ -0.32
SIN3B-212ENST00000602204 M0R143 59 aa13.03□□□□□ -0.32
SIN3B-212ENST00000602204 MEIG1Q5JSS6 88 aa13.03□□□□□ -0.32
SIN3B-212ENST00000602204 Q6ZRN7 208 aaPredicted RBP13.03□□□□□ -0.32
SIN3B-212ENST00000602204 SPANXDQ9BXN6 97 aa13.03□□□□□ -0.32
SIN3B-212ENST00000602204 SPANXCQ9NY87 97 aa13.03□□□□□ -0.32
SIN3B-212ENST00000602204 HIGD2BQ4VC39 106 aa13.02□□□□□ -0.33
SIN3B-212ENST00000602204 C2orf82Q6UX34 121 aa13.02□□□□□ -0.33
SIN3B-212ENST00000602204 HIST1H4GQ99525 98 aa13.02□□□□□ -0.33
SIN3B-212ENST00000602204 TRBV30A0A0K0K1B3 111 aa13.01□□□□□ -0.33
SIN3B-212ENST00000602204 SRSF9Q13242 221 aaKnown RBP eCLIP13.01□□□□□ -0.33
SIN3B-212ENST00000602204 COX17Q14061 63 aa13.01□□□□□ -0.33
SIN3B-212ENST00000602204 C14orf177Q52M58 125 aa13.01□□□□□ -0.33
SIN3B-212ENST00000602204 C6orf223Q8N319 242 aa13.01□□□□□ -0.33
SIN3B-212ENST00000602204 ERG28Q9UKR5 140 aa13.01□□□□□ -0.33
SIN3B-212ENST00000602204 M0R2N4 97 aa13□□□□□ -0.33
SIN3B-212ENST00000602204 CAMK2N2Q96S95 79 aa13□□□□□ -0.33
SIN3B-212ENST00000602204 PPDPFQ9H3Y8 114 aa13□□□□□ -0.33
SIN3B-212ENST00000602204 IFITM1P13164 125 aa12.99□□□□□ -0.33
SIN3B-212ENST00000602204 GCSHP23434 173 aa12.99□□□□□ -0.33
SIN3B-212ENST00000602204 CEND1Q8N111 149 aa12.99□□□□□ -0.33
SIN3B-212ENST00000602204 COPS9Q8WXC6 57 aa12.99□□□□□ -0.33
SIN3B-212ENST00000602204 SMIM13P0DJ93 91 aa12.98□□□□□ -0.33
SIN3B-212ENST00000602204 PTTG1IPP53801 180 aa12.98□□□□□ -0.33
SIN3B-212ENST00000602204 UNQ6190/PRO20217Q6UXQ8 127 aa12.98□□□□□ -0.33
SIN3B-212ENST00000602204 RNF151Q2KHN1 245 aa12.97□□□□□ -0.33
SIN3B-212ENST00000602204 BVES-AS1Q5T3Y7 98 aa12.97□□□□□ -0.33
SIN3B-212ENST00000602204 ADAMTSL4-AS1Q5T5F5 129 aa12.97□□□□□ -0.33
SIN3B-212ENST00000602204 LINC00526Q96FQ7 95 aa12.97□□□□□ -0.33
SIN3B-212ENST00000602204 SYCNQ0VAF6 134 aa12.96□□□□□ -0.33
SIN3B-212ENST00000602204 C10orf25Q5T742 122 aa12.96□□□□□ -0.33
SIN3B-212ENST00000602204 HINT1P49773 126 aaPredicted RBP12.95□□□□□ -0.34
SIN3B-212ENST00000602204 LINC00158P58513 81 aa12.95□□□□□ -0.34
SIN3B-212ENST00000602204 C1orf134Q5TEV5 83 aa12.95□□□□□ -0.34
SIN3B-212ENST00000602204 C6orf48Q9UBA6 75 aa12.95□□□□□ -0.34
SIN3B-212ENST00000602204 LRCOL1A6NCL2 159 aa12.94□□□□□ -0.34
SIN3B-212ENST00000602204 Q6ZRU5 148 aa12.94□□□□□ -0.34
SIN3B-212ENST00000602204 SNHG12Q9BXW3 62 aa12.94□□□□□ -0.34
SIN3B-212ENST00000602204 TMEM238LA0A1B0GVL6 79 aa12.93□□□□□ -0.34
SIN3B-212ENST00000602204 A6NJY4 79 aa12.93□□□□□ -0.34
SIN3B-212ENST00000602204 RPL24P83731 157 aaKnown RBP12.93□□□□□ -0.34
SIN3B-212ENST00000602204 CARD19Q96LW7 228 aa12.93□□□□□ -0.34
SIN3B-212ENST00000602204 PFN2P35080 140 aa12.92□□□□□ -0.34
SIN3B-212ENST00000602204 CNBPP62633 177 aaKnown RBP12.92□□□□□ -0.34
SIN3B-212ENST00000602204 WFDC2Q14508 124 aa12.92□□□□□ -0.34
SIN3B-212ENST00000602204 MIR7-3HGQ8N6C7 128 aa12.92□□□□□ -0.34
SIN3B-212ENST00000602204 LECT2O14960 151 aa12.91□□□□□ -0.34
SIN3B-212ENST00000602204 MUSTN1Q8IVN3 82 aa12.91□□□□□ -0.34
SIN3B-212ENST00000602204 LINC00308Q8TCZ7 52 aa12.91□□□□□ -0.34
SIN3B-212ENST00000602204 LOC107984156A0A0G2JMH3 177 aa12.9□□□□□ -0.34
SIN3B-212ENST00000602204 A0A0U1RRA0 63 aa12.9□□□□□ -0.34
SIN3B-212ENST00000602204 LCE6AA0A183 80 aa12.9□□□□□ -0.34
SIN3B-212ENST00000602204 FXYD2P54710 66 aa12.9□□□□□ -0.34
SIN3B-212ENST00000602204 ARL17AQ8IVW1 177 aa12.9□□□□□ -0.34
SIN3B-212ENST00000602204 A6NDN8 102 aa12.89□□□□□ -0.35
SIN3B-212ENST00000602204 EREGO14944 169 aa12.89□□□□□ -0.35
SIN3B-212ENST00000602204 C9orf116Q5BN46 136 aaPredicted RBP12.89□□□□□ -0.35
SIN3B-212ENST00000602204 DAND5Q8N907 189 aa12.89□□□□□ -0.35
SIN3B-212ENST00000602204 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.88□□□□□ -0.35
SIN3B-212ENST00000602204 SLPIP03973 132 aa12.88□□□□□ -0.35
SIN3B-212ENST00000602204 TLX1NBP0CAT3 122 aa12.88□□□□□ -0.35
SIN3B-212ENST00000602204 BATFQ16520 125 aa12.88□□□□□ -0.35
SIN3B-212ENST00000602204 LBHQ53QV2 105 aaPredicted RBP12.88□□□□□ -0.35
SIN3B-212ENST00000602204 KMT2AQ03164 3969 aa12.88□□□□□ -0.35
SIN3B-212ENST00000602204 NDUFC2-KCTD14E9PQ53 114 aa12.87□□□□□ -0.35
SIN3B-212ENST00000602204 A0A087WTM6 91 aa12.86□□□□□ -0.35
SIN3B-212ENST00000602204 SOSTDC1Q6X4U4 206 aa12.86□□□□□ -0.35
SIN3B-212ENST00000602204 A0A1B0GWB2 263 aa12.85□□□□□ -0.35
SIN3B-212ENST00000602204 A4D1N5 150 aa12.85□□□□□ -0.35
SIN3B-212ENST00000602204 DNAH10Q8IVF4 4471 aa12.84□□□□□ -0.35
SIN3B-212ENST00000602204 COL5A1-AS1Q5SY13 56 aa12.84□□□□□ -0.35
SIN3B-212ENST00000602204 Q8N814 137 aa12.84□□□□□ -0.35
SIN3B-212ENST00000602204 SND1-IT1Q9HBX3 110 aa12.84□□□□□ -0.35
SIN3B-212ENST00000602204 PKIGQ9Y2B9 76 aa12.84□□□□□ -0.35
SIN3B-212ENST00000602204 NPC2P61916 151 aa12.83□□□□□ -0.36
SIN3B-212ENST00000602204 EIF4EBP3O60516 100 aaPredicted RBP12.82□□□□□ -0.36
SIN3B-212ENST00000602204 NHP2Q9NX24 153 aaKnown RBP12.82□□□□□ -0.36
SIN3B-212ENST00000602204 A0A0B4J2C4 111 aa12.81□□□□□ -0.36
SIN3B-212ENST00000602204 LOC107984640A0A0U1RRK4 108 aa12.81□□□□□ -0.36
SIN3B-212ENST00000602204 NDUFC2O95298 119 aa12.8□□□□□ -0.36
SIN3B-212ENST00000602204 CFC1BP0CG36 223 aa12.79□□□□□ -0.36
SIN3B-212ENST00000602204 CFC1P0CG37 223 aa12.79□□□□□ -0.36
SIN3B-212ENST00000602204 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.78□□□□□ -0.36
SIN3B-212ENST00000602204 RTL8CO15255 209 aa12.78□□□□□ -0.36
SIN3B-212ENST00000602204 Q6ZRP5 223 aa12.78□□□□□ -0.36
SIN3B-212ENST00000602204 C9orf163Q8N9P6 203 aa12.78□□□□□ -0.36
SIN3B-212ENST00000602204 RPL18AQ02543 176 aaKnown RBP12.76□□□□□ -0.37
SIN3B-212ENST00000602204 RAB37Q96AX2 223 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms