RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 C10orf25Q5T742 122 aa9.99□□□□□ -0.81
PPFIA4-213ENST00000601609 LINC01561Q8N1V8 128 aa9.99□□□□□ -0.81
PPFIA4-213ENST00000601609 LINC00469Q8N7U9 141 aa9.98□□□□□ -0.81
PPFIA4-213ENST00000601609 C6orf48Q9UBA6 75 aa9.98□□□□□ -0.81
PPFIA4-213ENST00000601609 DMBT1Q9UGM3 2413 aaPredicted RBP9.98□□□□□ -0.81
PPFIA4-213ENST00000601609 LINC01546A6NGU7 62 aa9.97□□□□□ -0.81
PPFIA4-213ENST00000601609 HNRNPA3P51991 378 aaKnown RBP9.97□□□□□ -0.81
PPFIA4-213ENST00000601609 CKS1BP61024 79 aa9.97□□□□□ -0.81
PPFIA4-213ENST00000601609 C2orf82Q6UX34 121 aa9.97□□□□□ -0.81
PPFIA4-213ENST00000601609 C18orf32Q8TCD1 76 aa9.97□□□□□ -0.81
PPFIA4-213ENST00000601609 CDKN2A-AS1Q9UH64 79 aa9.97□□□□□ -0.81
PPFIA4-213ENST00000601609 KIAA0087Q14695 138 aa9.96□□□□□ -0.82
PPFIA4-213ENST00000601609 GAGE2EQ4V326 116 aa9.96□□□□□ -0.82
PPFIA4-213ENST00000601609 C9orf116Q5BN46 136 aaPredicted RBP9.96□□□□□ -0.82
PPFIA4-213ENST00000601609 C6orf226Q5I0X4 101 aa9.96□□□□□ -0.82
PPFIA4-213ENST00000601609 BAGE3Q86Y29 109 aa9.96□□□□□ -0.82
PPFIA4-213ENST00000601609 GAGE2DQ9UEU5 116 aa9.96□□□□□ -0.82
PPFIA4-213ENST00000601609 MYCBP2O75592 4640 aa9.95□□□□□ -0.82
PPFIA4-213ENST00000601609 KRTAP29-1A8MX34 341 aaPredicted RBP9.95□□□□□ -0.82
PPFIA4-213ENST00000601609 LINC00614P0C842 121 aa9.95□□□□□ -0.82
PPFIA4-213ENST00000601609 FAM19A3Q7Z5A8 133 aa9.95□□□□□ -0.82
PPFIA4-213ENST00000601609 TRBV30A0A0K0K1B3 111 aa9.94□□□□□ -0.82
PPFIA4-213ENST00000601609 A0A1W2PNN7 141 aa9.94□□□□□ -0.82
PPFIA4-213ENST00000601609 HBDP02042 147 aa9.94□□□□□ -0.82
PPFIA4-213ENST00000601609 PRR3P79522 188 aaKnown RBP9.94□□□□□ -0.82
PPFIA4-213ENST00000601609 PMVKQ15126 192 aa9.94□□□□□ -0.82
PPFIA4-213ENST00000601609 HIST3H2BBQ8N257 126 aa9.94□□□□□ -0.82
PPFIA4-213ENST00000601609 TINCRA0A1B0GVN0 87 aa9.93□□□□□ -0.82
PPFIA4-213ENST00000601609 S100A2P29034 98 aa9.93□□□□□ -0.82
PPFIA4-213ENST00000601609 PMCHL1Q16048 86 aa9.93□□□□□ -0.82
PPFIA4-213ENST00000601609 Q6ZRP5 223 aa9.93□□□□□ -0.82
PPFIA4-213ENST00000601609 Q8IZM0 81 aa9.93□□□□□ -0.82
PPFIA4-213ENST00000601609 CST9LQ9H4G1 147 aa9.93□□□□□ -0.82
PPFIA4-213ENST00000601609 OXTP01178 125 aa9.92□□□□□ -0.82
PPFIA4-213ENST00000601609 TLX1NBP0CAT3 122 aa9.92□□□□□ -0.82
PPFIA4-213ENST00000601609 SERF1AO75920 110 aa9.91□□□□□ -0.82
PPFIA4-213ENST00000601609 PDZD11Q5EBL8 140 aa9.91□□□□□ -0.82
PPFIA4-213ENST00000601609 FAM19A5Q7Z5A7 132 aaPredicted RBP9.91□□□□□ -0.82
PPFIA4-213ENST00000601609 URB1-AS1Q96HZ7 61 aa9.91□□□□□ -0.82
PPFIA4-213ENST00000601609 NDUFC2-KCTD14E9PQ53 114 aa9.9□□□□□ -0.82
PPFIA4-213ENST00000601609 H3BRM9 83 aa9.9□□□□□ -0.82
PPFIA4-213ENST00000601609 SPINK8P0C7L1 97 aa9.9□□□□□ -0.82
PPFIA4-213ENST00000601609 AKR1D1P51857 326 aa9.9□□□□□ -0.82
PPFIA4-213ENST00000601609 PHF5AQ7RTV0 110 aaKnown RBP9.9□□□□□ -0.82
PPFIA4-213ENST00000601609 PKHD1L1Q86WI1 4243 aa9.89□□□□□ -0.83
PPFIA4-213ENST00000601609 A0A096LNJ9 63 aa9.89□□□□□ -0.83
PPFIA4-213ENST00000601609 FAM168BA1KXE4 195 aa9.89□□□□□ -0.83
PPFIA4-213ENST00000601609 SMIM1B2RUZ4 78 aa9.89□□□□□ -0.83
PPFIA4-213ENST00000601609 NUPR1O60356 82 aa9.89□□□□□ -0.83
PPFIA4-213ENST00000601609 CXCL5P42830 114 aa9.89□□□□□ -0.83
PPFIA4-213ENST00000601609 LINC00310P59036 64 aa9.89□□□□□ -0.83
PPFIA4-213ENST00000601609 F8VRH5 84 aa9.88□□□□□ -0.83
PPFIA4-213ENST00000601609 ATP5LO75964 103 aa9.88□□□□□ -0.83
PPFIA4-213ENST00000601609 COX7B2Q8TF08 81 aa9.88□□□□□ -0.83
PPFIA4-213ENST00000601609 HIST1H2BLQ99880 126 aa9.88□□□□□ -0.83
PPFIA4-213ENST00000601609 IGLV5-45A0A087WSX0 123 aa9.87□□□□□ -0.83
PPFIA4-213ENST00000601609 FABP4P15090 132 aa9.87□□□□□ -0.83
PPFIA4-213ENST00000601609 CHCHD1Q96BP2 118 aaKnown RBP9.87□□□□□ -0.83
PPFIA4-213ENST00000601609 IGLC3P0DOY3 106 aa9.86□□□□□ -0.83
PPFIA4-213ENST00000601609 M0QXV9 152 aa9.85□□□□□ -0.83
PPFIA4-213ENST00000601609 HSBP1O75506 76 aa9.85□□□□□ -0.83
PPFIA4-213ENST00000601609 UBE2BP63146 152 aa9.85□□□□□ -0.83
PPFIA4-213ENST00000601609 C1orf137Q5JT78 98 aa9.84□□□□□ -0.83
PPFIA4-213ENST00000601609 PSORS1C2Q9UIG4 136 aa9.84□□□□□ -0.83
PPFIA4-213ENST00000601609 HERC1Q15751 4861 aa9.84□□□□□ -0.83
PPFIA4-213ENST00000601609 C9orf129Q5T035 196 aaKnown RBP9.83□□□□□ -0.84
PPFIA4-213ENST00000601609 XAGE1AQ9HD64 81 aa9.83□□□□□ -0.84
PPFIA4-213ENST00000601609 ZNF22P17026 224 aaPredicted RBP9.82□□□□□ -0.84
PPFIA4-213ENST00000601609 TMEM170BQ5T4T1 132 aa9.82□□□□□ -0.84
PPFIA4-213ENST00000601609 SPINK6Q6UWN8 80 aa9.82□□□□□ -0.84
PPFIA4-213ENST00000601609 CHTOPQ9Y3Y2 248 aaKnown RBP9.82□□□□□ -0.84
PPFIA4-213ENST00000601609 LRP1Q07954 4544 aaKnown RBP9.81□□□□□ -0.84
PPFIA4-213ENST00000601609 FAM19A2Q8N3H0 131 aa9.81□□□□□ -0.84
PPFIA4-213ENST00000601609 IFI27L1Q96BM0 104 aa9.81□□□□□ -0.84
PPFIA4-213ENST00000601609 FAT3Q8TDW7 4589 aa9.81□□□□□ -0.84
PPFIA4-213ENST00000601609 REG3GQ6UW15 175 aa9.8□□□□□ -0.84
PPFIA4-213ENST00000601609 C11orf86A6NJI1 115 aa9.79□□□□□ -0.84
PPFIA4-213ENST00000601609 SMIM6P0DI80 62 aa9.78□□□□□ -0.84
PPFIA4-213ENST00000601609 SERTAD4-AS1Q5TG53 156 aa9.78□□□□□ -0.84
PPFIA4-213ENST00000601609 H0Y8G0 127 aa9.77□□□□□ -0.85
PPFIA4-213ENST00000601609 KRTAP7-1Q8IUC3 87 aa9.77□□□□□ -0.85
PPFIA4-213ENST00000601609 IGLV5-39A0A0G2JS06 123 aa9.76□□□□□ -0.85
PPFIA4-213ENST00000601609 PFN2P35080 140 aa9.76□□□□□ -0.85
PPFIA4-213ENST00000601609 LINC00518Q8N0U6 118 aa9.76□□□□□ -0.85
PPFIA4-213ENST00000601609 TRAV12-1A0A0B4J245 112 aa9.75□□□□□ -0.85
PPFIA4-213ENST00000601609 LEPROTL1O95214 131 aa9.75□□□□□ -0.85
PPFIA4-213ENST00000601609 IGLV7-43P04211 117 aa9.75□□□□□ -0.85
PPFIA4-213ENST00000601609 SRSF9Q13242 221 aaKnown RBP eCLIP9.75□□□□□ -0.85
PPFIA4-213ENST00000601609 JOSD1Q15040 202 aaPredicted RBP9.75□□□□□ -0.85
PPFIA4-213ENST00000601609 LBHQ53QV2 105 aaPredicted RBP9.75□□□□□ -0.85
PPFIA4-213ENST00000601609 KRTAP11-1Q8IUC1 163 aa9.75□□□□□ -0.85
PPFIA4-213ENST00000601609 HSPB8Q9UJY1 196 aa9.75□□□□□ -0.85
PPFIA4-213ENST00000601609 C22orf24Q9Y442 160 aa9.75□□□□□ -0.85
PPFIA4-213ENST00000601609 KRTDAPP60985 99 aa9.74□□□□□ -0.85
PPFIA4-213ENST00000601609 PYY3Q5JQD4 70 aa9.74□□□□□ -0.85
PPFIA4-213ENST00000601609 ZNF625Q96I27 306 aaPredicted RBP9.74□□□□□ -0.85
PPFIA4-213ENST00000601609 MT1HL1P0DM35 61 aa9.73□□□□□ -0.85
PPFIA4-213ENST00000601609 C12orf57Q99622 126 aa9.73□□□□□ -0.85
PPFIA4-213ENST00000601609 ERG28Q9UKR5 140 aa9.73□□□□□ -0.85
PPFIA4-213ENST00000601609 SCGB1D1O95968 90 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms