RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 TAGLN2P37802 199 aaKnown RBP3.78□□□□□ -1.8
LINC00343-209ENST00000601607 RPL28P46779 137 aaKnown RBP3.78□□□□□ -1.8
LINC00343-209ENST00000601607 UBE2G1P62253 170 aa3.78□□□□□ -1.8
LINC00343-209ENST00000601607 OR2D3Q8NGH3 330 aa3.78□□□□□ -1.8
LINC00343-209ENST00000601607 HIST1H2BAQ96A08 127 aa3.78□□□□□ -1.8
LINC00343-209ENST00000601607 FMC1Q96HJ9 113 aa3.78□□□□□ -1.8
LINC00343-209ENST00000601607 TMEM101Q96IK0 257 aa3.78□□□□□ -1.8
LINC00343-209ENST00000601607 BTF3L4Q96K17 158 aa3.78□□□□□ -1.8
LINC00343-209ENST00000601607 IMMP2LQ96T52 175 aa3.78□□□□□ -1.8
LINC00343-209ENST00000601607 MRPL35Q9NZE8 188 aaKnown RBP3.78□□□□□ -1.8
LINC00343-209ENST00000601607 NUPR1O60356 82 aa3.77□□□□□ -1.81
LINC00343-209ENST00000601607 ATP6V1G1O75348 118 aa3.77□□□□□ -1.81
LINC00343-209ENST00000601607 NDUFA5Q16718 116 aa3.77□□□□□ -1.81
LINC00343-209ENST00000601607 ALKAL2Q6UX46 152 aa3.77□□□□□ -1.81
LINC00343-209ENST00000601607 C5orf38Q86SI9 138 aa3.77□□□□□ -1.81
LINC00343-209ENST00000601607 TCEAL7Q9BRU2 100 aa3.77□□□□□ -1.81
LINC00343-209ENST00000601607 TPPP3Q9BW30 176 aa3.77□□□□□ -1.81
LINC00343-209ENST00000601607 IGKV2D-26A0A0A0MRZ7 120 aa3.76□□□□□ -1.81
LINC00343-209ENST00000601607 FAM74A7A6NL05 159 aa3.76□□□□□ -1.81
LINC00343-209ENST00000601607 NCR2O95944 276 aa3.76□□□□□ -1.81
LINC00343-209ENST00000601607 TLX1NBP0CAT3 122 aa3.76□□□□□ -1.81
LINC00343-209ENST00000601607 CTAG1AP78358 180 aa3.76□□□□□ -1.81
LINC00343-209ENST00000601607 FAM229BQ4G0N7 80 aa3.76□□□□□ -1.81
LINC00343-209ENST00000601607 C10orf91Q5T1B1 145 aa3.76□□□□□ -1.81
LINC00343-209ENST00000601607 UQCC3Q6UW78 93 aa3.76□□□□□ -1.81
LINC00343-209ENST00000601607 CDC42SE2Q9NRR3 84 aa3.76□□□□□ -1.81
LINC00343-209ENST00000601607 C6orf48Q9UBA6 75 aa3.76□□□□□ -1.81
LINC00343-209ENST00000601607 NEBP20929 6669 aa3.75□□□□□ -1.81
LINC00343-209ENST00000601607 KRTAP4-16G5E9R7 235 aaPredicted RBP3.75□□□□□ -1.81
LINC00343-209ENST00000601607 TMEM250H0YL14 139 aa3.75□□□□□ -1.81
LINC00343-209ENST00000601607 NDUFA1O15239 70 aa3.75□□□□□ -1.81
LINC00343-209ENST00000601607 BCE1O60756 84 aa3.75□□□□□ -1.81
LINC00343-209ENST00000601607 SERF1AO75920 110 aa3.75□□□□□ -1.81
LINC00343-209ENST00000601607 AKR1C8PQ5T2L2 129 aa3.75□□□□□ -1.81
LINC00343-209ENST00000601607 UNQ6190/PRO20217Q6UXQ8 127 aa3.75□□□□□ -1.81
LINC00343-209ENST00000601607 RPL39LQ96EH5 51 aaKnown RBP3.75□□□□□ -1.81
LINC00343-209ENST00000601607 FAM210AQ96ND0 272 aa3.75□□□□□ -1.81
LINC00343-209ENST00000601607 NKX6-2Q9C056 277 aaPredicted RBP3.75□□□□□ -1.81
LINC00343-209ENST00000601607 ACTR3CQ9C0K3 210 aaPredicted RBP3.75□□□□□ -1.81
LINC00343-209ENST00000601607 TRAV13-1A0A0B4J241 112 aa3.74□□□□□ -1.81
LINC00343-209ENST00000601607 MAP1LC3B2A6NCE7 125 aa3.74□□□□□ -1.81
LINC00343-209ENST00000601607 C1orf196B1AJZ1 125 aa3.74□□□□□ -1.81
LINC00343-209ENST00000601607 CTRLP40313 264 aa3.74□□□□□ -1.81
LINC00343-209ENST00000601607 AKR1C3P42330 323 aa3.74□□□□□ -1.81
LINC00343-209ENST00000601607 RNASE13Q5GAN3 156 aaKnown RBP3.74□□□□□ -1.81
LINC00343-209ENST00000601607 GATD1Q8NB37 220 aa3.74□□□□□ -1.81
LINC00343-209ENST00000601607 ORAOV1Q8WV07 137 aa3.74□□□□□ -1.81
LINC00343-209ENST00000601607 MAP1LC3BQ9GZQ8 125 aa3.74□□□□□ -1.81
LINC00343-209ENST00000601607 MANBALQ9NQG1 85 aa3.74□□□□□ -1.81
LINC00343-209ENST00000601607 SDHAF1A6NFY7 115 aa3.73□□□□□ -1.81
LINC00343-209ENST00000601607 TEX46H3BTG2 121 aa3.73□□□□□ -1.81
LINC00343-209ENST00000601607 IGLC6P0CF74 106 aa3.73□□□□□ -1.81
LINC00343-209ENST00000601607 RAB14P61106 215 aa3.73□□□□□ -1.81
LINC00343-209ENST00000601607 CCL20P78556 96 aa3.73□□□□□ -1.81
LINC00343-209ENST00000601607 C3orf22Q8N5N4 141 aa3.73□□□□□ -1.81
LINC00343-209ENST00000601607 OR10D4PQ8NGN7 298 aa3.73□□□□□ -1.81
LINC00343-209ENST00000601607 FAM213BQ8TBF2 198 aa3.73□□□□□ -1.81
LINC00343-209ENST00000601607 UBE2D4Q9Y2X8 147 aa3.73□□□□□ -1.81
LINC00343-209ENST00000601607 C22orf24Q9Y442 160 aa3.73□□□□□ -1.81
LINC00343-209ENST00000601607 TRGC1P0CF51 173 aa3.72□□□□□ -1.81
LINC00343-209ENST00000601607 TMEM241Q24JQ0 296 aa3.72□□□□□ -1.81
LINC00343-209ENST00000601607 MRPL52Q86TS9 123 aaKnown RBP3.72□□□□□ -1.81
LINC00343-209ENST00000601607 SFT2D1Q8WV19 159 aa3.72□□□□□ -1.81
LINC00343-209ENST00000601607 SMIM12Q96EX1 92 aa3.72□□□□□ -1.81
LINC00343-209ENST00000601607 MRAP2Q96G30 205 aa3.72□□□□□ -1.81
LINC00343-209ENST00000601607 TMEM242Q9NWH2 141 aa3.72□□□□□ -1.81
LINC00343-209ENST00000601607 C9JQL5 133 aa3.71□□□□□ -1.82
LINC00343-209ENST00000601607 NDUFC2-KCTD14E9PQ53 114 aa3.71□□□□□ -1.82
LINC00343-209ENST00000601607 F8WDY8 70 aa3.71□□□□□ -1.82
LINC00343-209ENST00000601607 PDE6DO43924 150 aa3.71□□□□□ -1.82
LINC00343-209ENST00000601607 SRP19P09132 144 aaKnown RBP3.71□□□□□ -1.82
LINC00343-209ENST00000601607 FAM74A3Q4VXF1 159 aa3.71□□□□□ -1.82
LINC00343-209ENST00000601607 PCOTHQ58A44 107 aa3.71□□□□□ -1.82
LINC00343-209ENST00000601607 LCE1CQ5T751 118 aa3.71□□□□□ -1.82
LINC00343-209ENST00000601607 LCE1BQ5T7P3 118 aa3.71□□□□□ -1.82
LINC00343-209ENST00000601607 SPAG11AQ6PDA7 123 aa3.71□□□□□ -1.82
LINC00343-209ENST00000601607 BAGE2Q86Y30 109 aa3.71□□□□□ -1.82
LINC00343-209ENST00000601607 KRTAP13-1Q8IUC0 172 aa3.71□□□□□ -1.82
LINC00343-209ENST00000601607 DAND5Q8N907 189 aa3.71□□□□□ -1.82
LINC00343-209ENST00000601607 SEC11CQ9BY50 192 aa3.71□□□□□ -1.82
LINC00343-209ENST00000601607 TMEM218A2RU14 115 aa3.7□□□□□ -1.82
LINC00343-209ENST00000601607 I3L3M4 83 aa3.7□□□□□ -1.82
LINC00343-209ENST00000601607 IFNA1P01562 189 aa3.7□□□□□ -1.82
LINC00343-209ENST00000601607 S100A9P06702 114 aaKnown RBP3.7□□□□□ -1.82
LINC00343-209ENST00000601607 PMCHP20382 165 aa3.7□□□□□ -1.82
LINC00343-209ENST00000601607 UBE2AP49459 152 aa3.7□□□□□ -1.82
LINC00343-209ENST00000601607 COX6B2Q6YFQ2 88 aa3.7□□□□□ -1.82
LINC00343-209ENST00000601607 RNASE7Q9H1E1 156 aaKnown RBP3.7□□□□□ -1.82
LINC00343-209ENST00000601607 TRBV20OR9-2A0A075B6H5 130 aa3.69□□□□□ -1.82
LINC00343-209ENST00000601607 ADCYAP1P18509 176 aa3.69□□□□□ -1.82
LINC00343-209ENST00000601607 PEA15Q15121 130 aa3.69□□□□□ -1.82
LINC00343-209ENST00000601607 LYZL1Q6UWQ5 148 aa3.69□□□□□ -1.82
LINC00343-209ENST00000601607 C2orf82Q6UX34 121 aa3.69□□□□□ -1.82
LINC00343-209ENST00000601607 Q6ZUT4 128 aa3.69□□□□□ -1.82
LINC00343-209ENST00000601607 MRPL55Q7Z7F7 128 aaKnown RBP3.69□□□□□ -1.82
LINC00343-209ENST00000601607 COMMD7Q86VX2 200 aa3.69□□□□□ -1.82
LINC00343-209ENST00000601607 LINC00469Q8N7U9 141 aa3.69□□□□□ -1.82
LINC00343-209ENST00000601607 PACRGQ96M98 296 aaPredicted RBP3.69□□□□□ -1.82
LINC00343-209ENST00000601607 XAGE1AQ9HD64 81 aa3.69□□□□□ -1.82
LINC00343-209ENST00000601607 TRBV30A0A0K0K1B3 111 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms