RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 PTTG1IPP53801 180 aa9.22□□□□□ -0.93
IRF3-229ENST00000601373 SRSF9Q13242 221 aaKnown RBP eCLIP9.22□□□□□ -0.93
IRF3-229ENST00000601373 CIRBPQ14011 172 aaKnown RBP9.22□□□□□ -0.93
IRF3-229ENST00000601373 Q8IZM0 81 aa9.22□□□□□ -0.93
IRF3-229ENST00000601373 HIST1H4GQ99525 98 aa9.22□□□□□ -0.93
IRF3-229ENST00000601373 C1orf43Q9BWL3 253 aa9.22□□□□□ -0.93
IRF3-229ENST00000601373 TOMM7Q9P0U1 55 aa9.22□□□□□ -0.93
IRF3-229ENST00000601373 C6orf226Q5I0X4 101 aa9.21□□□□□ -0.94
IRF3-229ENST00000601373 CEND1Q8N111 149 aa9.21□□□□□ -0.94
IRF3-229ENST00000601373 RMI2Q96E14 147 aa9.21□□□□□ -0.94
IRF3-229ENST00000601373 ZNF625Q96I27 306 aaPredicted RBP9.21□□□□□ -0.94
IRF3-229ENST00000601373 TAX1BP3O14907 124 aa9.2□□□□□ -0.94
IRF3-229ENST00000601373 CXCL5P42830 114 aa9.2□□□□□ -0.94
IRF3-229ENST00000601373 Q6ZVH6 145 aa9.2□□□□□ -0.94
IRF3-229ENST00000601373 GCSHP23434 173 aa9.19□□□□□ -0.94
IRF3-229ENST00000601373 UBE2V1Q13404 147 aa9.19□□□□□ -0.94
IRF3-229ENST00000601373 VAMP3Q15836 100 aa9.19□□□□□ -0.94
IRF3-229ENST00000601373 KRTAP26-1Q6PEX3 210 aa9.19□□□□□ -0.94
IRF3-229ENST00000601373 GTF2H5Q6ZYL4 71 aa9.19□□□□□ -0.94
IRF3-229ENST00000601373 IGKV2D-24A0A075B6R9 120 aa9.18□□□□□ -0.94
IRF3-229ENST00000601373 C9orf118A6NHY6 69 aa9.18□□□□□ -0.94
IRF3-229ENST00000601373 CFAP161Q6P656 301 aa9.18□□□□□ -0.94
IRF3-229ENST00000601373 STARD9Q9P2P6 4700 aa9.17□□□□□ -0.94
IRF3-229ENST00000601373 CKS1BP61024 79 aa9.17□□□□□ -0.94
IRF3-229ENST00000601373 MEIG1Q5JSS6 88 aa9.17□□□□□ -0.94
IRF3-229ENST00000601373 SPANXDQ9BXN6 97 aa9.17□□□□□ -0.94
IRF3-229ENST00000601373 SPANXCQ9NY87 97 aa9.17□□□□□ -0.94
IRF3-229ENST00000601373 KIAA0087Q14695 138 aa9.16□□□□□ -0.94
IRF3-229ENST00000601373 LITAFQ99732 161 aa9.16□□□□□ -0.94
IRF3-229ENST00000601373 IFITM1P13164 125 aa9.15□□□□□ -0.94
IRF3-229ENST00000601373 SPAG11BQ08648 103 aa9.15□□□□□ -0.94
IRF3-229ENST00000601373 COPS9Q8WXC6 57 aa9.15□□□□□ -0.94
IRF3-229ENST00000601373 Q9HAA7 133 aa9.15□□□□□ -0.94
IRF3-229ENST00000601373 FXYD2P54710 66 aa9.14□□□□□ -0.95
IRF3-229ENST00000601373 TTC32Q5I0X7 151 aa9.14□□□□□ -0.95
IRF3-229ENST00000601373 LYRM7Q5U5X0 104 aa9.14□□□□□ -0.95
IRF3-229ENST00000601373 KRTAP17-1Q9BYP8 105 aa9.14□□□□□ -0.95
IRF3-229ENST00000601373 F8WDY8 70 aa9.13□□□□□ -0.95
IRF3-229ENST00000601373 LCE2BO14633 110 aa9.13□□□□□ -0.95
IRF3-229ENST00000601373 FABP2P12104 132 aa9.13□□□□□ -0.95
IRF3-229ENST00000601373 RPL24P83731 157 aaKnown RBP9.13□□□□□ -0.95
IRF3-229ENST00000601373 ADAMTSL4-AS1Q5T5F5 129 aa9.13□□□□□ -0.95
IRF3-229ENST00000601373 A0A1B0GWB2 263 aa9.12□□□□□ -0.95
IRF3-229ENST00000601373 GAGE10A6NGK3 116 aa9.12□□□□□ -0.95
IRF3-229ENST00000601373 ZNF561-AS1K7EIQ3 104 aa9.12□□□□□ -0.95
IRF3-229ENST00000601373 MUSTN1Q8IVN3 82 aa9.12□□□□□ -0.95
IRF3-229ENST00000601373 PPDPFQ9H3Y8 114 aa9.12□□□□□ -0.95
IRF3-229ENST00000601373 LINC00158P58513 81 aa9.11□□□□□ -0.95
IRF3-229ENST00000601373 COX17Q14061 63 aa9.11□□□□□ -0.95
IRF3-229ENST00000601373 NTN5Q8WTR8 489 aaPredicted RBP9.11□□□□□ -0.95
IRF3-229ENST00000601373 NHP2Q9NX24 153 aaKnown RBP9.11□□□□□ -0.95
IRF3-229ENST00000601373 ERG28Q9UKR5 140 aa9.11□□□□□ -0.95
IRF3-229ENST00000601373 A0A1W2PPM0 123 aa9.1□□□□□ -0.95
IRF3-229ENST00000601373 C4orf48Q5BLP8 95 aa9.1□□□□□ -0.95
IRF3-229ENST00000601373 C2orf82Q6UX34 121 aa9.1□□□□□ -0.95
IRF3-229ENST00000601373 C2orf48Q96LS8 159 aa9.1□□□□□ -0.95
IRF3-229ENST00000601373 GVQW2A0A096LPI5 108 aaPredicted RBP9.09□□□□□ -0.95
IRF3-229ENST00000601373 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.09□□□□□ -0.95
IRF3-229ENST00000601373 A0A0U1RRA0 63 aa9.09□□□□□ -0.95
IRF3-229ENST00000601373 NBDYA0A0U1RRE5 68 aa9.09□□□□□ -0.95
IRF3-229ENST00000601373 H3BUT2 72 aa9.09□□□□□ -0.95
IRF3-229ENST00000601373 C15orf56Q8N910 161 aa9.09□□□□□ -0.95
IRF3-229ENST00000601373 A4D1N5 150 aa9.08□□□□□ -0.96
IRF3-229ENST00000601373 LINC00308Q8TCZ7 52 aa9.08□□□□□ -0.96
IRF3-229ENST00000601373 ALMS1Q8TCU4 4167 aa9.08□□□□□ -0.96
IRF3-229ENST00000601373 TRBV30A0A0K0K1B3 111 aa9.07□□□□□ -0.96
IRF3-229ENST00000601373 K7EP34 96 aa9.07□□□□□ -0.96
IRF3-229ENST00000601373 PFN2P35080 140 aa9.07□□□□□ -0.96
IRF3-229ENST00000601373 HIGD2BQ4VC39 106 aa9.07□□□□□ -0.96
IRF3-229ENST00000601373 UNQ6190/PRO20217Q6UXQ8 127 aa9.07□□□□□ -0.96
IRF3-229ENST00000601373 C6orf223Q8N319 242 aa9.07□□□□□ -0.96
IRF3-229ENST00000601373 MIR7-3HGQ8N6C7 128 aa9.07□□□□□ -0.96
IRF3-229ENST00000601373 DAND5Q8N907 189 aa9.07□□□□□ -0.96
IRF3-229ENST00000601373 RAB37Q96AX2 223 aa9.07□□□□□ -0.96
IRF3-229ENST00000601373 CAMK2N2Q96S95 79 aa9.07□□□□□ -0.96
IRF3-229ENST00000601373 KRTAP1-5Q9BYS1 174 aa9.07□□□□□ -0.96
IRF3-229ENST00000601373 PLECQ15149 4684 aaKnown RBP9.07□□□□□ -0.96
IRF3-229ENST00000601373 SPCS1Q9Y6A9 102 aa9.06□□□□□ -0.96
IRF3-229ENST00000601373 HYDINQ4G0P3 5121 aa9.05□□□□□ -0.96
IRF3-229ENST00000601373 A0A0B4J2C4 111 aa9.05□□□□□ -0.96
IRF3-229ENST00000601373 J3QL48 77 aa9.05□□□□□ -0.96
IRF3-229ENST00000601373 LINC00526Q96FQ7 95 aa9.05□□□□□ -0.96
IRF3-229ENST00000601373 USP17L23D6RBM5 183 aa9.04□□□□□ -0.96
IRF3-229ENST00000601373 PSCAO43653 123 aa9.04□□□□□ -0.96
IRF3-229ENST00000601373 CFC1BP0CG36 223 aa9.04□□□□□ -0.96
IRF3-229ENST00000601373 CFC1P0CG37 223 aa9.04□□□□□ -0.96
IRF3-229ENST00000601373 NPC2P61916 151 aa9.04□□□□□ -0.96
IRF3-229ENST00000601373 C10orf25Q5T742 122 aa9.04□□□□□ -0.96
IRF3-229ENST00000601373 LOC107984156A0A0G2JMH3 177 aa9.03□□□□□ -0.96
IRF3-229ENST00000601373 SYCNQ0VAF6 134 aa9.03□□□□□ -0.96
IRF3-229ENST00000601373 SOSTDC1Q6X4U4 206 aa9.03□□□□□ -0.96
IRF3-229ENST00000601373 ARL17AQ8IVW1 177 aa9.03□□□□□ -0.96
IRF3-229ENST00000601373 PRO1854Q9UHT4 67 aa9.03□□□□□ -0.96
IRF3-229ENST00000601373 K7ERJ3 54 aa9.02□□□□□ -0.97
IRF3-229ENST00000601373 RNF151Q2KHN1 245 aa9.02□□□□□ -0.97
IRF3-229ENST00000601373 C14orf177Q52M58 125 aa9.02□□□□□ -0.97
IRF3-229ENST00000601373 C6orf48Q9UBA6 75 aa9.02□□□□□ -0.97
IRF3-229ENST00000601373 VPS13DQ5THJ4 4388 aa9.01□□□□□ -0.97
IRF3-229ENST00000601373 C9orf116Q5BN46 136 aaPredicted RBP9.01□□□□□ -0.97
IRF3-229ENST00000601373 Q6ZRU5 148 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms