RNA–Protein interactions for RNA: ENST00000601154.1

CCDC9-206, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 454 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-206ENST00000601154 MRPL55Q7Z7F7 128 aaKnown RBP4.89□□□□□ -1.63
CCDC9-206ENST00000601154 Q8IZM0 81 aa4.89□□□□□ -1.63
CCDC9-206ENST00000601154 LINC01561Q8N1V8 128 aa4.89□□□□□ -1.63
CCDC9-206ENST00000601154 VCX2Q9H322 139 aa4.89□□□□□ -1.63
CCDC9-206ENST00000601154 MAP1LC3AQ9H492 121 aa4.89□□□□□ -1.63
CCDC9-206ENST00000601154 LCE2AQ5TA79 106 aaPredicted RBP4.88□□□□□ -1.63
CCDC9-206ENST00000601154 CDKN2A-AS1Q9UH64 79 aa4.88□□□□□ -1.63
CCDC9-206ENST00000601154 F8VRH5 84 aa4.87□□□□□ -1.63
CCDC9-206ENST00000601154 PEA15Q15121 130 aa4.87□□□□□ -1.63
CCDC9-206ENST00000601154 ATP5L2Q7Z4Y8 100 aa4.87□□□□□ -1.63
CCDC9-206ENST00000601154 Q8N8P6 123 aa4.87□□□□□ -1.63
CCDC9-206ENST00000601154 LINC00167Q96N53 147 aa4.87□□□□□ -1.63
CCDC9-206ENST00000601154 AMELXQ99217 191 aa4.87□□□□□ -1.63
CCDC9-206ENST00000601154 UBE2AP49459 152 aa4.86□□□□□ -1.63
CCDC9-206ENST00000601154 HERVK_113P63121 156 aa4.86□□□□□ -1.63
CCDC9-206ENST00000601154 KRTAP13-2Q52LG2 175 aa4.86□□□□□ -1.63
CCDC9-206ENST00000601154 CDIP1Q9H305 208 aa4.86□□□□□ -1.63
CCDC9-206ENST00000601154 GEMIN7Q9H840 131 aaKnown RBP4.86□□□□□ -1.63
CCDC9-206ENST00000601154 TP73-AS1Q9UF72 201 aa4.86□□□□□ -1.63
CCDC9-206ENST00000601154 KRTAP9-6A0A140TA67 174 aa4.85□□□□□ -1.63
CCDC9-206ENST00000601154 IGIPA6NJ69 53 aa4.85□□□□□ -1.63
CCDC9-206ENST00000601154 SCO1O75880 301 aa4.85□□□□□ -1.63
CCDC9-206ENST00000601154 RAB5BP61020 215 aa4.85□□□□□ -1.63
CCDC9-206ENST00000601154 ORMDL2Q53FV1 153 aa4.85□□□□□ -1.63
CCDC9-206ENST00000601154 LINC00304Q8N9R0 145 aa4.85□□□□□ -1.63
CCDC9-206ENST00000601154 LAMTOR2Q9Y2Q5 125 aa4.85□□□□□ -1.63
CCDC9-206ENST00000601154 IGKV2-28A0A075B6P5 120 aa4.84□□□□□ -1.63
CCDC9-206ENST00000601154 PRSS47A8MTI9 375 aa4.84□□□□□ -1.63
CCDC9-206ENST00000601154 IGKV2D-28P01615 120 aa4.84□□□□□ -1.63
CCDC9-206ENST00000601154 CXCL5P42830 114 aa4.84□□□□□ -1.63
CCDC9-206ENST00000601154 FAM19A3Q7Z5A8 133 aa4.84□□□□□ -1.63
CCDC9-206ENST00000601154 NKAPP1Q8N9T2 125 aa4.84□□□□□ -1.63
CCDC9-206ENST00000601154 IGLV7-46A0A075B6I9 117 aa4.83□□□□□ -1.64
CCDC9-206ENST00000601154 SMIM1B2RUZ4 78 aa4.83□□□□□ -1.64
CCDC9-206ENST00000601154 SEC11AP67812 179 aa4.83□□□□□ -1.64
CCDC9-206ENST00000601154 PRLHP81277 87 aa4.83□□□□□ -1.64
CCDC9-206ENST00000601154 PNRC1Q12796 327 aaPredicted RBP4.83□□□□□ -1.64
CCDC9-206ENST00000601154 PAPPA-AS1Q5QFB9 102 aa4.83□□□□□ -1.64
CCDC9-206ENST00000601154 KRTAP13-1Q8IUC0 172 aa4.83□□□□□ -1.64
CCDC9-206ENST00000601154 COX7B2Q8TF08 81 aa4.83□□□□□ -1.64
CCDC9-206ENST00000601154 IGKV2D-26A0A0A0MRZ7 120 aa4.82□□□□□ -1.64
CCDC9-206ENST00000601154 NPSP0C0P6 89 aa4.82□□□□□ -1.64
CCDC9-206ENST00000601154 SPINK8P0C7L1 97 aa4.82□□□□□ -1.64
CCDC9-206ENST00000601154 TIMM17AQ99595 171 aa4.82□□□□□ -1.64
CCDC9-206ENST00000601154 NXT2Q9NPJ8 142 aaKnown RBP4.82□□□□□ -1.64
CCDC9-206ENST00000601154 ADCYAP1P18509 176 aa4.81□□□□□ -1.64
CCDC9-206ENST00000601154 TPRXLQ17RH7 258 aa4.81□□□□□ -1.64
CCDC9-206ENST00000601154 FAM229BQ4G0N7 80 aa4.81□□□□□ -1.64
CCDC9-206ENST00000601154 PDZD11Q5EBL8 140 aa4.81□□□□□ -1.64
CCDC9-206ENST00000601154 FAM19A1Q7Z5A9 133 aa4.81□□□□□ -1.64
CCDC9-206ENST00000601154 TOMM6Q96B49 74 aa4.81□□□□□ -1.64
CCDC9-206ENST00000601154 SCGB3A1Q96QR1 104 aa4.81□□□□□ -1.64
CCDC9-206ENST00000601154 IGLV5-37A0A075B6J1 123 aa4.8□□□□□ -1.64
CCDC9-206ENST00000601154 TMEM238C9JI98 176 aa4.8□□□□□ -1.64
CCDC9-206ENST00000601154 K7EMI3 77 aa4.8□□□□□ -1.64
CCDC9-206ENST00000601154 PFN2P35080 140 aa4.8□□□□□ -1.64
CCDC9-206ENST00000601154 KIAA1644Q3SXP7 199 aa4.8□□□□□ -1.64
CCDC9-206ENST00000601154 C3orf22Q8N5N4 141 aa4.8□□□□□ -1.64
CCDC9-206ENST00000601154 TINCRA0A1B0GVN0 87 aa4.79□□□□□ -1.64
CCDC9-206ENST00000601154 MT-ND4LP03901 98 aa4.79□□□□□ -1.64
CCDC9-206ENST00000601154 ERASQ7Z444 233 aa4.79□□□□□ -1.64
CCDC9-206ENST00000601154 ANAPC16Q96DE5 110 aa4.79□□□□□ -1.64
CCDC9-206ENST00000601154 PPDPFQ9H3Y8 114 aa4.79□□□□□ -1.64
CCDC9-206ENST00000601154 IGLV5-45A0A087WSX0 123 aa4.78□□□□□ -1.64
CCDC9-206ENST00000601154 ATP5LO75964 103 aa4.78□□□□□ -1.64
CCDC9-206ENST00000601154 G0S2P27469 103 aa4.78□□□□□ -1.64
CCDC9-206ENST00000601154 TMEM126AQ9H061 195 aa4.78□□□□□ -1.64
CCDC9-206ENST00000601154 VPREB1P12018 145 aa4.77□□□□□ -1.65
CCDC9-206ENST00000601154 HIGD2AQ9BW72 106 aa4.77□□□□□ -1.65
CCDC9-206ENST00000601154 CST9LQ9H4G1 147 aa4.77□□□□□ -1.65
CCDC9-206ENST00000601154 H3BRM9 83 aa4.76□□□□□ -1.65
CCDC9-206ENST00000601154 M0R378 163 aa4.76□□□□□ -1.65
CCDC9-206ENST00000601154 RAB14P61106 215 aa4.76□□□□□ -1.65
CCDC9-206ENST00000601154 CBLN2Q8IUK8 224 aa4.76□□□□□ -1.65
CCDC9-206ENST00000601154 Q8NDZ9 215 aa4.76□□□□□ -1.65
CCDC9-206ENST00000601154 PLEKHB2Q96CS7 222 aa4.76□□□□□ -1.65
CCDC9-206ENST00000601154 ZNF625Q96I27 306 aaPredicted RBP4.76□□□□□ -1.65
CCDC9-206ENST00000601154 SND1-IT1Q9HBX3 110 aa4.76□□□□□ -1.65
CCDC9-206ENST00000601154 NDUFA6P56556 154 aa4.75□□□□□ -1.65
CCDC9-206ENST00000601154 PMVKQ15126 192 aa4.75□□□□□ -1.65
CCDC9-206ENST00000601154 MRPL18Q9H0U6 180 aaKnown RBP4.75□□□□□ -1.65
CCDC9-206ENST00000601154 ERG28Q9UKR5 140 aa4.75□□□□□ -1.65
CCDC9-206ENST00000601154 RPL24P83731 157 aaKnown RBP4.74□□□□□ -1.65
CCDC9-206ENST00000601154 DAND5Q8N907 189 aa4.74□□□□□ -1.65
CCDC9-206ENST00000601154 IGLV5-39A0A0G2JS06 123 aa4.73□□□□□ -1.65
CCDC9-206ENST00000601154 ZNF22P17026 224 aaPredicted RBP4.73□□□□□ -1.65
CCDC9-206ENST00000601154 FA2HQ7L5A8 372 aa4.73□□□□□ -1.65
CCDC9-206ENST00000601154 LINC00337Q8N6G1 96 aa4.73□□□□□ -1.65
CCDC9-206ENST00000601154 SPRR4Q96PI1 79 aa4.73□□□□□ -1.65
CCDC9-206ENST00000601154 SMCO4Q9NRQ5 59 aa4.73□□□□□ -1.65
CCDC9-206ENST00000601154 A0A0U1RRA0 63 aa4.72□□□□□ -1.65
CCDC9-206ENST00000601154 LINC01549A6NIU2 74 aa4.72□□□□□ -1.65
CCDC9-206ENST00000601154 IGLC3P0DOY3 106 aa4.72□□□□□ -1.65
CCDC9-206ENST00000601154 C4orf48Q5BLP8 95 aa4.72□□□□□ -1.65
CCDC9-206ENST00000601154 SPAG11AQ6PDA7 123 aa4.72□□□□□ -1.65
CCDC9-206ENST00000601154 Q8NBF4 154 aa4.72□□□□□ -1.65
CCDC9-206ENST00000601154 TMA7Q9Y2S6 64 aaKnown RBP4.72□□□□□ -1.65
CCDC9-206ENST00000601154 LINC01546A6NGU7 62 aa4.71□□□□□ -1.66
CCDC9-206ENST00000601154 LINC01547P58512 204 aaPredicted RBP4.71□□□□□ -1.66
CCDC9-206ENST00000601154 CTAG1AP78358 180 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms