RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 ZNF625Q96I27 306 aaPredicted RBP14.55□□□□□ -0.08
SNRNP70-209ENST00000601065 USP17L23D6RBM5 183 aa14.54□□□□□ -0.08
SNRNP70-209ENST00000601065 KIAA0087Q14695 138 aa14.54□□□□□ -0.08
SNRNP70-209ENST00000601065 CFAP161Q6P656 301 aa14.54□□□□□ -0.08
SNRNP70-209ENST00000601065 HIGD1BQ9P298 99 aa14.54□□□□□ -0.08
SNRNP70-209ENST00000601065 A0A0J9YXY3 114 aa14.53□□□□□ -0.08
SNRNP70-209ENST00000601065 LECT2O14960 151 aa14.52□□□□□ -0.08
SNRNP70-209ENST00000601065 SPAG11BQ08648 103 aa14.52□□□□□ -0.08
SNRNP70-209ENST00000601065 FRAS1Q86XX4 4008 aa14.52□□□□□ -0.08
SNRNP70-209ENST00000601065 WFDC2Q14508 124 aa14.52□□□□□ -0.09
SNRNP70-209ENST00000601065 HIGD2BQ4VC39 106 aa14.52□□□□□ -0.09
SNRNP70-209ENST00000601065 LINC00526Q96FQ7 95 aa14.52□□□□□ -0.09
SNRNP70-209ENST00000601065 GVQW2A0A096LPI5 108 aaPredicted RBP14.51□□□□□ -0.09
SNRNP70-209ENST00000601065 C2orf82Q6UX34 121 aa14.51□□□□□ -0.09
SNRNP70-209ENST00000601065 CKS1BP61024 79 aa14.5□□□□□ -0.09
SNRNP70-209ENST00000601065 RYR2Q92736 4967 aa14.5□□□□□ -0.09
SNRNP70-209ENST00000601065 DNAH17Q9UFH2 4485 aa14.5□□□□□ -0.09
SNRNP70-209ENST00000601065 LRCOL1A6NCL2 159 aa14.5□□□□□ -0.09
SNRNP70-209ENST00000601065 ZNF561-AS1K7EIQ3 104 aa14.49□□□□□ -0.09
SNRNP70-209ENST00000601065 HERV-K104P63124 156 aa14.49□□□□□ -0.09
SNRNP70-209ENST00000601065 CXCL5P42830 114 aa14.47□□□□□ -0.09
SNRNP70-209ENST00000601065 SFTA2Q6UW10 78 aa14.47□□□□□ -0.09
SNRNP70-209ENST00000601065 NTN5Q8WTR8 489 aaPredicted RBP14.47□□□□□ -0.09
SNRNP70-209ENST00000601065 RTL8CO15255 209 aa14.46□□□□□ -0.09
SNRNP70-209ENST00000601065 MEIG1Q5JSS6 88 aa14.45□□□□□ -0.1
SNRNP70-209ENST00000601065 HIST1H4GQ99525 98 aa14.45□□□□□ -0.1
SNRNP70-209ENST00000601065 SRSF9Q13242 221 aaKnown RBP eCLIP14.45□□□□□ -0.1
SNRNP70-209ENST00000601065 LITAFQ99732 161 aa14.45□□□□□ -0.1
SNRNP70-209ENST00000601065 TMEM238C9JI98 176 aa14.44□□□□□ -0.1
SNRNP70-209ENST00000601065 HINT1P49773 126 aaPredicted RBP14.44□□□□□ -0.1
SNRNP70-209ENST00000601065 HSD52Q0P140 79 aa14.44□□□□□ -0.1
SNRNP70-209ENST00000601065 C2orf48Q96LS8 159 aa14.44□□□□□ -0.1
SNRNP70-209ENST00000601065 A0A087WTM6 91 aa14.43□□□□□ -0.1
SNRNP70-209ENST00000601065 A0A0U1RRA0 63 aa14.43□□□□□ -0.1
SNRNP70-209ENST00000601065 CIRBPQ14011 172 aaKnown RBP14.43□□□□□ -0.1
SNRNP70-209ENST00000601065 C14orf177Q52M58 125 aa14.43□□□□□ -0.1
SNRNP70-209ENST00000601065 ADAMTSL4-AS1Q5T5F5 129 aa14.43□□□□□ -0.1
SNRNP70-209ENST00000601065 UNQ6190/PRO20217Q6UXQ8 127 aa14.43□□□□□ -0.1
SNRNP70-209ENST00000601065 SPANXB1Q9NS25 103 aaPredicted RBP14.43□□□□□ -0.1
SNRNP70-209ENST00000601065 C10orf25Q5T742 122 aa14.42□□□□□ -0.1
SNRNP70-209ENST00000601065 TIMM17BO60830 172 aa14.42□□□□□ -0.1
SNRNP70-209ENST00000601065 SMIM13P0DJ93 91 aa14.42□□□□□ -0.1
SNRNP70-209ENST00000601065 CAMK2N2Q96S95 79 aa14.42□□□□□ -0.1
SNRNP70-209ENST00000601065 SLPIP03973 132 aa14.4□□□□□ -0.1
SNRNP70-209ENST00000601065 TAL2Q16559 108 aa14.4□□□□□ -0.1
SNRNP70-209ENST00000601065 DAND5Q8N907 189 aa14.4□□□□□ -0.1
SNRNP70-209ENST00000601065 FAT2Q9NYQ8 4349 aa14.4□□□□□ -0.1
SNRNP70-209ENST00000601065 F8WDY8 70 aa14.39□□□□□ -0.11
SNRNP70-209ENST00000601065 GCSHP23434 173 aa14.39□□□□□ -0.11
SNRNP70-209ENST00000601065 TNP2Q05952 138 aa14.39□□□□□ -0.11
SNRNP70-209ENST00000601065 LBHQ53QV2 105 aaPredicted RBP14.39□□□□□ -0.11
SNRNP70-209ENST00000601065 ERG28Q9UKR5 140 aa14.39□□□□□ -0.11
SNRNP70-209ENST00000601065 PFN2P35080 140 aa14.39□□□□□ -0.11
SNRNP70-209ENST00000601065 BATFQ16520 125 aa14.39□□□□□ -0.11
SNRNP70-209ENST00000601065 BVES-AS1Q5T3Y7 98 aa14.39□□□□□ -0.11
SNRNP70-209ENST00000601065 Q6ZRU5 148 aa14.39□□□□□ -0.11
SNRNP70-209ENST00000601065 Q8N814 137 aa14.39□□□□□ -0.11
SNRNP70-209ENST00000601065 LINC00158P58513 81 aa14.38□□□□□ -0.11
SNRNP70-209ENST00000601065 C9orf116Q5BN46 136 aaPredicted RBP14.38□□□□□ -0.11
SNRNP70-209ENST00000601065 CEND1Q8N111 149 aa14.38□□□□□ -0.11
SNRNP70-209ENST00000601065 SNHG12Q9BXW3 62 aa14.38□□□□□ -0.11
SNRNP70-209ENST00000601065 M0R143 59 aa14.37□□□□□ -0.11
SNRNP70-209ENST00000601065 SYCNQ0VAF6 134 aa14.37□□□□□ -0.11
SNRNP70-209ENST00000601065 SPANXDQ9BXN6 97 aa14.37□□□□□ -0.11
SNRNP70-209ENST00000601065 SPANXCQ9NY87 97 aa14.37□□□□□ -0.11
SNRNP70-209ENST00000601065 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.37□□□□□ -0.11
SNRNP70-209ENST00000601065 C6orf48Q9UBA6 75 aa14.36□□□□□ -0.11
SNRNP70-209ENST00000601065 EREGO14944 169 aa14.35□□□□□ -0.11
SNRNP70-209ENST00000601065 NPC2P61916 151 aa14.35□□□□□ -0.11
SNRNP70-209ENST00000601065 CNBPP62633 177 aaKnown RBP14.35□□□□□ -0.11
SNRNP70-209ENST00000601065 CARD19Q96LW7 228 aa14.35□□□□□ -0.11
SNRNP70-209ENST00000601065 TRBV30A0A0K0K1B3 111 aa14.34□□□□□ -0.11
SNRNP70-209ENST00000601065 FXYD2P54710 66 aa14.34□□□□□ -0.11
SNRNP70-209ENST00000601065 Q6ZVH6 145 aa14.34□□□□□ -0.11
SNRNP70-209ENST00000601065 MIR7-3HGQ8N6C7 128 aa14.34□□□□□ -0.11
SNRNP70-209ENST00000601065 MUSTN1Q8IVN3 82 aa14.34□□□□□ -0.11
SNRNP70-209ENST00000601065 HECTD4Q9Y4D8 3996 aa14.33□□□□□ -0.11
SNRNP70-209ENST00000601065 RYR3Q15413 4870 aa14.33□□□□□ -0.12
SNRNP70-209ENST00000601065 PTTG1IPP53801 180 aa14.32□□□□□ -0.12
SNRNP70-209ENST00000601065 COX17Q14061 63 aa14.32□□□□□ -0.12
SNRNP70-209ENST00000601065 DNAH11Q96DT5 4516 aa14.31□□□□□ -0.12
SNRNP70-209ENST00000601065 EIF4EBP3O60516 100 aaPredicted RBP14.31□□□□□ -0.12
SNRNP70-209ENST00000601065 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.3□□□□□ -0.12
SNRNP70-209ENST00000601065 LINC00308Q8TCZ7 52 aa14.3□□□□□ -0.12
SNRNP70-209ENST00000601065 IFITM1P13164 125 aa14.29□□□□□ -0.12
SNRNP70-209ENST00000601065 RNF151Q2KHN1 245 aa14.29□□□□□ -0.12
SNRNP70-209ENST00000601065 SOSTDC1Q6X4U4 206 aa14.29□□□□□ -0.12
SNRNP70-209ENST00000601065 RPL24P83731 157 aaKnown RBP14.28□□□□□ -0.12
SNRNP70-209ENST00000601065 LINC00336Q6ZUF6 198 aa14.28□□□□□ -0.12
SNRNP70-209ENST00000601065 PKD1P98161 4303 aa14.26□□□□□ -0.13
SNRNP70-209ENST00000601065 A4D1N5 150 aa14.26□□□□□ -0.13
SNRNP70-209ENST00000601065 TMEM238LA0A1B0GVL6 79 aa14.25□□□□□ -0.13
SNRNP70-209ENST00000601065 A6NJY4 79 aa14.25□□□□□ -0.13
SNRNP70-209ENST00000601065 C9orf163Q8N9P6 203 aa14.25□□□□□ -0.13
SNRNP70-209ENST00000601065 COPS9Q8WXC6 57 aa14.25□□□□□ -0.13
SNRNP70-209ENST00000601065 NHP2Q9NX24 153 aaKnown RBP14.25□□□□□ -0.13
SNRNP70-209ENST00000601065 A6NDN8 102 aa14.24□□□□□ -0.13
SNRNP70-209ENST00000601065 NDUFC2-KCTD14E9PQ53 114 aa14.24□□□□□ -0.13
SNRNP70-209ENST00000601065 FUSP35637 526 aaKnown RBP eCLIP14.24□□□□□ -0.136e-8■■□□□ 12.7
SNRNP70-209ENST00000601065 SND1-IT1Q9HBX3 110 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms