RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 GAGE2DQ9UEU5 116 aa10.44□□□□□ -0.74
NOTCH3-205ENST00000600841 CDKN2A-AS1Q9UH64 79 aa10.44□□□□□ -0.74
NOTCH3-205ENST00000600841 CKS1BP61024 79 aa10.43□□□□□ -0.74
NOTCH3-205ENST00000600841 NDUFC2-KCTD14E9PQ53 114 aa10.42□□□□□ -0.74
NOTCH3-205ENST00000600841 C6orf226Q5I0X4 101 aa10.42□□□□□ -0.74
NOTCH3-205ENST00000600841 SPINK6Q6UWN8 80 aa10.42□□□□□ -0.74
NOTCH3-205ENST00000600841 PHF5AQ7RTV0 110 aaKnown RBP10.42□□□□□ -0.74
NOTCH3-205ENST00000600841 Q8IZM0 81 aa10.42□□□□□ -0.74
NOTCH3-205ENST00000600841 MT1HL1P0DM35 61 aa10.41□□□□□ -0.74
NOTCH3-205ENST00000600841 LINC00469Q8N7U9 141 aa10.41□□□□□ -0.74
NOTCH3-205ENST00000600841 C18orf32Q8TCD1 76 aa10.41□□□□□ -0.74
NOTCH3-205ENST00000600841 HMCN2Q8NDA2 5059 aa10.41□□□□□ -0.74
NOTCH3-205ENST00000600841 FAM168BA1KXE4 195 aa10.4□□□□□ -0.74
NOTCH3-205ENST00000600841 CST9LQ9H4G1 147 aa10.4□□□□□ -0.74
NOTCH3-205ENST00000600841 PSORS1C2Q9UIG4 136 aa10.4□□□□□ -0.74
NOTCH3-205ENST00000600841 TINCRA0A1B0GVN0 87 aa10.39□□□□□ -0.75
NOTCH3-205ENST00000600841 LINC00614P0C842 121 aa10.39□□□□□ -0.75
NOTCH3-205ENST00000600841 PMVKQ15126 192 aa10.39□□□□□ -0.75
NOTCH3-205ENST00000600841 FAM19A5Q7Z5A7 132 aaPredicted RBP10.39□□□□□ -0.75
NOTCH3-205ENST00000600841 RAB5BP61020 215 aa10.38□□□□□ -0.75
NOTCH3-205ENST00000600841 SRSF9Q13242 221 aaKnown RBP eCLIP10.38□□□□□ -0.75
NOTCH3-205ENST00000600841 REG3GQ6UW15 175 aa10.38□□□□□ -0.75
NOTCH3-205ENST00000600841 TNXBP22105 4242 aa10.38□□□□□ -0.75
NOTCH3-205ENST00000600841 LINC01600Q96MT4 127 aa10.37□□□□□ -0.75
NOTCH3-205ENST00000600841 IGLV5-45A0A087WSX0 123 aa10.36□□□□□ -0.75
NOTCH3-205ENST00000600841 SMIM1B2RUZ4 78 aa10.36□□□□□ -0.75
NOTCH3-205ENST00000600841 F8VRH5 84 aa10.36□□□□□ -0.75
NOTCH3-205ENST00000600841 SCO1O75880 301 aa10.36□□□□□ -0.75
NOTCH3-205ENST00000600841 TRGC2P03986 189 aa10.36□□□□□ -0.75
NOTCH3-205ENST00000600841 CXCL5P42830 114 aa10.36□□□□□ -0.75
NOTCH3-205ENST00000600841 PDZD11Q5EBL8 140 aa10.36□□□□□ -0.75
NOTCH3-205ENST00000600841 C1orf137Q5JT78 98 aa10.36□□□□□ -0.75
NOTCH3-205ENST00000600841 COLCA2A8K830 154 aa10.35□□□□□ -0.75
NOTCH3-205ENST00000600841 M0QXV9 152 aa10.35□□□□□ -0.75
NOTCH3-205ENST00000600841 C9orf129Q5T035 196 aaKnown RBP10.35□□□□□ -0.75
NOTCH3-205ENST00000600841 HBDP02042 147 aa10.34□□□□□ -0.75
NOTCH3-205ENST00000600841 KRTAP7-1Q8IUC3 87 aa10.34□□□□□ -0.75
NOTCH3-205ENST00000600841 COX7B2Q8TF08 81 aa10.34□□□□□ -0.75
NOTCH3-205ENST00000600841 URB1-AS1Q96HZ7 61 aa10.34□□□□□ -0.75
NOTCH3-205ENST00000600841 A0A096LNJ9 63 aa10.33□□□□□ -0.76
NOTCH3-205ENST00000600841 SPINK8P0C7L1 97 aa10.33□□□□□ -0.76
NOTCH3-205ENST00000600841 NDUFA6P56556 154 aa10.33□□□□□ -0.76
NOTCH3-205ENST00000600841 PMCHL1Q16048 86 aa10.33□□□□□ -0.76
NOTCH3-205ENST00000600841 BAGE3Q86Y29 109 aa10.33□□□□□ -0.76
NOTCH3-205ENST00000600841 PLA2G2DQ9UNK4 145 aa10.33□□□□□ -0.76
NOTCH3-205ENST00000600841 H3BRM9 83 aa10.32□□□□□ -0.76
NOTCH3-205ENST00000600841 UBE2BP63146 152 aa10.32□□□□□ -0.76
NOTCH3-205ENST00000600841 KRTAP11-1Q8IUC1 163 aa10.31□□□□□ -0.76
NOTCH3-205ENST00000600841 XAGE1AQ9HD64 81 aa10.31□□□□□ -0.76
NOTCH3-205ENST00000600841 IGLV7-43P04211 117 aa10.3□□□□□ -0.76
NOTCH3-205ENST00000600841 IGLC3P0DOY3 106 aa10.3□□□□□ -0.76
NOTCH3-205ENST00000600841 CHCHD1Q96BP2 118 aaKnown RBP10.3□□□□□ -0.76
NOTCH3-205ENST00000600841 ATP5LO75964 103 aa10.29□□□□□ -0.76
NOTCH3-205ENST00000600841 HSBP1O75506 76 aa10.27□□□□□ -0.77
NOTCH3-205ENST00000600841 DIRC1Q969H9 104 aa10.27□□□□□ -0.77
NOTCH3-205ENST00000600841 ZNF22P17026 224 aaPredicted RBP10.26□□□□□ -0.77
NOTCH3-205ENST00000600841 LBHQ53QV2 105 aaPredicted RBP10.26□□□□□ -0.77
NOTCH3-205ENST00000600841 C22orf24Q9Y442 160 aa10.26□□□□□ -0.77
NOTCH3-205ENST00000600841 S100A1P23297 94 aa10.25□□□□□ -0.77
NOTCH3-205ENST00000600841 KRTAP10-8P60410 259 aa10.25□□□□□ -0.77
NOTCH3-205ENST00000600841 IGLV5-39A0A0G2JS06 123 aa10.24□□□□□ -0.77
NOTCH3-205ENST00000600841 ODF1Q14990 250 aa10.24□□□□□ -0.77
NOTCH3-205ENST00000600841 FAM19A2Q8N3H0 131 aa10.24□□□□□ -0.77
NOTCH3-205ENST00000600841 ATP6V1G1O75348 118 aa10.23□□□□□ -0.77
NOTCH3-205ENST00000600841 SERF1AO75920 110 aa10.23□□□□□ -0.77
NOTCH3-205ENST00000600841 TP73-AS1Q9UF72 201 aa10.23□□□□□ -0.77
NOTCH3-205ENST00000600841 C11orf86A6NJI1 115 aa10.22□□□□□ -0.77
NOTCH3-205ENST00000600841 H0Y9J4 135 aa10.22□□□□□ -0.77
NOTCH3-205ENST00000600841 MRPL55Q7Z7F7 128 aaKnown RBP10.22□□□□□ -0.77
NOTCH3-205ENST00000600841 TMEM170BQ5T4T1 132 aa10.21□□□□□ -0.77
NOTCH3-205ENST00000600841 IFI27L1Q96BM0 104 aa10.21□□□□□ -0.77
NOTCH3-205ENST00000600841 CHTOPQ9Y3Y2 248 aaKnown RBP10.21□□□□□ -0.77
NOTCH3-205ENST00000600841 NUPR1O60356 82 aa10.2□□□□□ -0.78
NOTCH3-205ENST00000600841 PFN2P35080 140 aa10.19□□□□□ -0.78
NOTCH3-205ENST00000600841 UBR4Q5T4S7 5183 aa10.19□□□□□ -0.78
NOTCH3-205ENST00000600841 TRAV12-1A0A0B4J245 112 aa10.18□□□□□ -0.78
NOTCH3-205ENST00000600841 LEPROTL1O95214 131 aa10.18□□□□□ -0.78
NOTCH3-205ENST00000600841 LINC00310P59036 64 aa10.18□□□□□ -0.78
NOTCH3-205ENST00000600841 H0Y8G0 127 aa10.17□□□□□ -0.78
NOTCH3-205ENST00000600841 HIST1H2BKO60814 126 aa10.17□□□□□ -0.78
NOTCH3-205ENST00000600841 HIST1H2BJP06899 126 aa10.17□□□□□ -0.78
NOTCH3-205ENST00000600841 FABP4P15090 132 aa10.17□□□□□ -0.78
NOTCH3-205ENST00000600841 HIST1H2BOP23527 126 aa10.17□□□□□ -0.78
NOTCH3-205ENST00000600841 HIST1H2BBP33778 126 aa10.17□□□□□ -0.78
NOTCH3-205ENST00000600841 HIST1H2BDP58876 126 aa10.17□□□□□ -0.78
NOTCH3-205ENST00000600841 HIST1H2BCP62807 126 aa10.17□□□□□ -0.78
NOTCH3-205ENST00000600841 HIST2H2BEQ16778 126 aa10.17□□□□□ -0.78
NOTCH3-205ENST00000600841 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.17□□□□□ -0.78
NOTCH3-205ENST00000600841 SFTA2Q6UW10 78 aa10.17□□□□□ -0.78
NOTCH3-205ENST00000600841 NKAPP1Q8N9T2 125 aa10.17□□□□□ -0.78
NOTCH3-205ENST00000600841 HIST1H2BHQ93079 126 aa10.17□□□□□ -0.78
NOTCH3-205ENST00000600841 HIST1H2BNQ99877 126 aa10.17□□□□□ -0.78
NOTCH3-205ENST00000600841 HIST1H2BMQ99879 126 aa10.17□□□□□ -0.78
NOTCH3-205ENST00000600841 ERG28Q9UKR5 140 aa10.17□□□□□ -0.78
NOTCH3-205ENST00000600841 IGLV5-37A0A075B6J1 123 aa10.16□□□□□ -0.78
NOTCH3-205ENST00000600841 ZNF861PO60384 105 aa10.16□□□□□ -0.78
NOTCH3-205ENST00000600841 COX17Q14061 63 aa10.16□□□□□ -0.78
NOTCH3-205ENST00000600841 LINC00167Q96N53 147 aa10.16□□□□□ -0.78
NOTCH3-205ENST00000600841 GAGE10A6NGK3 116 aa10.15□□□□□ -0.78
NOTCH3-205ENST00000600841 RPL37AP8A6NKH3 93 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms