RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 SEC11AP67812 179 aa12.62□□□□□ -0.39
PNKP-207ENST00000596014 TMEM170BQ5T4T1 132 aa12.62□□□□□ -0.39
PNKP-207ENST00000596014 UBE2D1P51668 147 aa12.61□□□□□ -0.39
PNKP-207ENST00000596014 LINC00242Q5T6M2 205 aa12.61□□□□□ -0.39
PNKP-207ENST00000596014 ORAOV1Q8WV07 137 aa12.61□□□□□ -0.39
PNKP-207ENST00000596014 MYMXA0A1B0GTQ4 84 aa12.61□□□□□ -0.39
PNKP-207ENST00000596014 COX7A2LO14548 114 aa12.61□□□□□ -0.39
PNKP-207ENST00000596014 ZNF22P17026 224 aaPredicted RBP12.61□□□□□ -0.39
PNKP-207ENST00000596014 IGHV3OR16-9A0A0B4J2B5 98 aa12.6□□□□□ -0.39
PNKP-207ENST00000596014 A0A0J9YXV3 536 aa12.6□□□□□ -0.39
PNKP-207ENST00000596014 C5orf38Q86SI9 138 aa12.6□□□□□ -0.39
PNKP-207ENST00000596014 IGHV1-58A0A0C4DH39 117 aa12.58□□□□□ -0.4
PNKP-207ENST00000596014 ZNF815PA8K554 130 aa12.58□□□□□ -0.4
PNKP-207ENST00000596014 GCSHP23434 173 aa12.58□□□□□ -0.4
PNKP-207ENST00000596014 COX6A2Q02221 97 aa12.58□□□□□ -0.4
PNKP-207ENST00000596014 TMEM223A0PJW6 202 aa12.57□□□□□ -0.4
PNKP-207ENST00000596014 MALP21145 153 aa12.57□□□□□ -0.4
PNKP-207ENST00000596014 HIGD2BQ4VC39 106 aa12.57□□□□□ -0.4
PNKP-207ENST00000596014 GVQW2A0A096LPI5 108 aaPredicted RBP12.57□□□□□ -0.4
PNKP-207ENST00000596014 A6NDN8 102 aa12.57□□□□□ -0.4
PNKP-207ENST00000596014 TAX1BP3O14907 124 aa12.57□□□□□ -0.4
PNKP-207ENST00000596014 TSPEAR-AS2P59090 65 aa12.57□□□□□ -0.4
PNKP-207ENST00000596014 Q6ZVH6 145 aa12.57□□□□□ -0.4
PNKP-207ENST00000596014 FAM19A3Q7Z5A8 133 aa12.57□□□□□ -0.4
PNKP-207ENST00000596014 KRTAP10-1P60331 282 aa12.56□□□□□ -0.4
PNKP-207ENST00000596014 TAL2Q16559 108 aa12.56□□□□□ -0.4
PNKP-207ENST00000596014 LEPROTO15243 131 aa12.54□□□□□ -0.4
PNKP-207ENST00000596014 SLPIP03973 132 aa12.54□□□□□ -0.4
PNKP-207ENST00000596014 DNAH8Q96JB1 4490 aa12.54□□□□□ -0.4
PNKP-207ENST00000596014 TINCRA0A1B0GVN0 87 aa12.54□□□□□ -0.4
PNKP-207ENST00000596014 CNBPP62633 177 aaKnown RBP12.54□□□□□ -0.4
PNKP-207ENST00000596014 LINC01620Q4KN68 170 aa12.54□□□□□ -0.4
PNKP-207ENST00000596014 A0A087WZ39 114 aa12.53□□□□□ -0.4
PNKP-207ENST00000596014 APOMO95445 188 aa12.53□□□□□ -0.4
PNKP-207ENST00000596014 LGALS3P17931 250 aaKnown RBP12.53□□□□□ -0.4
PNKP-207ENST00000596014 PLEKHB2Q96CS7 222 aa12.53□□□□□ -0.4
PNKP-207ENST00000596014 APOBP04114 4563 aaKnown RBP12.53□□□□□ -0.4
PNKP-207ENST00000596014 J3QQQ9 107 aa12.52□□□□□ -0.4
PNKP-207ENST00000596014 FXYD2P54710 66 aa12.52□□□□□ -0.4
PNKP-207ENST00000596014 HERVK_113P63121 156 aa12.52□□□□□ -0.4
PNKP-207ENST00000596014 CEND1Q8N111 149 aa12.52□□□□□ -0.4
PNKP-207ENST00000596014 LINC00526Q96FQ7 95 aa12.52□□□□□ -0.4
PNKP-207ENST00000596014 ZNF561-AS1K7EIQ3 104 aa12.51□□□□□ -0.41
PNKP-207ENST00000596014 SCGB1D4Q6XE38 83 aa12.51□□□□□ -0.41
PNKP-207ENST00000596014 C9orf163Q8N9P6 203 aa12.51□□□□□ -0.41
PNKP-207ENST00000596014 GEMIN7Q9H840 131 aaKnown RBP12.51□□□□□ -0.41
PNKP-207ENST00000596014 IGHV3-64A0A075B6Q5 118 aa12.51□□□□□ -0.41
PNKP-207ENST00000596014 KIAA1109Q2LD37 5005 aa12.51□□□□□ -0.41
PNKP-207ENST00000596014 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.5□□□□□ -0.41
PNKP-207ENST00000596014 HIST1H4GQ99525 98 aa12.5□□□□□ -0.41
PNKP-207ENST00000596014 CDKN2A-AS1Q9UH64 79 aa12.5□□□□□ -0.41
PNKP-207ENST00000596014 H3BRM9 83 aa12.49□□□□□ -0.41
PNKP-207ENST00000596014 LINC01561Q8N1V8 128 aa12.49□□□□□ -0.41
PNKP-207ENST00000596014 IGLV5-45A0A087WSX0 123 aa12.48□□□□□ -0.41
PNKP-207ENST00000596014 PTTG1IPP53801 180 aa12.47□□□□□ -0.41
PNKP-207ENST00000596014 SPAG11BQ08648 103 aa12.47□□□□□ -0.41
PNKP-207ENST00000596014 C2orf48Q96LS8 159 aa12.45□□□□□ -0.42
PNKP-207ENST00000596014 SPANXB1Q9NS25 103 aaPredicted RBP12.45□□□□□ -0.42
PNKP-207ENST00000596014 NHP2Q9NX24 153 aaKnown RBP12.45□□□□□ -0.42
PNKP-207ENST00000596014 CDK2AP2O75956 126 aa12.45□□□□□ -0.42
PNKP-207ENST00000596014 SPINK8P0C7L1 97 aa12.45□□□□□ -0.42
PNKP-207ENST00000596014 SYCNQ0VAF6 134 aa12.45□□□□□ -0.42
PNKP-207ENST00000596014 FAM30AQ9NZY2 134 aa12.45□□□□□ -0.42
PNKP-207ENST00000596014 RYR1P21817 5038 aa12.44□□□□□ -0.42
PNKP-207ENST00000596014 C9orf118A6NHY6 69 aa12.44□□□□□ -0.42
PNKP-207ENST00000596014 SMIM13P0DJ93 91 aa12.44□□□□□ -0.42
PNKP-207ENST00000596014 SDIM1Q6ZPB5 146 aa12.44□□□□□ -0.42
PNKP-207ENST00000596014 HSPG2P98160 4391 aa12.44□□□□□ -0.42
PNKP-207ENST00000596014 K7ERJ3 54 aa12.43□□□□□ -0.42
PNKP-207ENST00000596014 KIAA0087Q14695 138 aa12.43□□□□□ -0.42
PNKP-207ENST00000596014 VAMP3Q15836 100 aa12.43□□□□□ -0.42
PNKP-207ENST00000596014 Q6ZSA8 131 aa12.43□□□□□ -0.42
PNKP-207ENST00000596014 RAB37Q96AX2 223 aa12.43□□□□□ -0.42
PNKP-207ENST00000596014 CARD19Q96LW7 228 aa12.43□□□□□ -0.42
PNKP-207ENST00000596014 CAMK2N2Q96S95 79 aa12.43□□□□□ -0.42
PNKP-207ENST00000596014 XGP55808 180 aa12.42□□□□□ -0.42
PNKP-207ENST00000596014 Q6ZRU5 148 aa12.42□□□□□ -0.42
PNKP-207ENST00000596014 SRSF9Q13242 221 aaKnown RBP eCLIP12.41□□□□□ -0.42
PNKP-207ENST00000596014 SMIM1B2RUZ4 78 aa12.4□□□□□ -0.42
PNKP-207ENST00000596014 F8WDY8 70 aa12.4□□□□□ -0.42
PNKP-207ENST00000596014 TMEM238LA0A1B0GVL6 79 aa12.39□□□□□ -0.43
PNKP-207ENST00000596014 A0A1B0GWB2 263 aa12.39□□□□□ -0.43
PNKP-207ENST00000596014 A6NJY4 79 aa12.39□□□□□ -0.43
PNKP-207ENST00000596014 H3BUT2 72 aa12.39□□□□□ -0.43
PNKP-207ENST00000596014 UBE2V1Q13404 147 aa12.39□□□□□ -0.43
PNKP-207ENST00000596014 TOMM7Q9P0U1 55 aa12.39□□□□□ -0.43
PNKP-207ENST00000596014 A0A0J9YXY3 114 aa12.38□□□□□ -0.43
PNKP-207ENST00000596014 NDUFA1O15239 70 aa12.38□□□□□ -0.43
PNKP-207ENST00000596014 PRSS2P07478 247 aa12.38□□□□□ -0.43
PNKP-207ENST00000596014 Q8IZM0 81 aa12.38□□□□□ -0.43
PNKP-207ENST00000596014 NAA38Q9BRA0 125 aaKnown RBP12.38□□□□□ -0.43
PNKP-207ENST00000596014 TMEM238C9JI98 176 aa12.38□□□□□ -0.43
PNKP-207ENST00000596014 C6orf226Q5I0X4 101 aa12.38□□□□□ -0.43
PNKP-207ENST00000596014 C10orf25Q5T742 122 aa12.38□□□□□ -0.43
PNKP-207ENST00000596014 UNQ6190/PRO20217Q6UXQ8 127 aa12.38□□□□□ -0.43
PNKP-207ENST00000596014 NDUFA12Q9UI09 145 aa12.38□□□□□ -0.43
PNKP-207ENST00000596014 IGLV5-39A0A0G2JS06 123 aa12.37□□□□□ -0.43
PNKP-207ENST00000596014 HAMPP81172 84 aa12.37□□□□□ -0.43
PNKP-207ENST00000596014 C2orf82Q6UX34 121 aa12.37□□□□□ -0.43
PNKP-207ENST00000596014 A0A1W2PPM0 123 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms