RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 A0A087WTM6 91 aa9.9□□□□□ -0.82
DDX49-204ENST00000595858 PMVKQ15126 192 aa9.9□□□□□ -0.82
DDX49-204ENST00000595858 HERVK_113P61574 105 aa9.89□□□□□ -0.83
DDX49-204ENST00000595858 VCX2Q9H322 139 aa9.89□□□□□ -0.83
DDX49-204ENST00000595858 GAGE12HA6NDE8 117 aa9.89□□□□□ -0.83
DDX49-204ENST00000595858 K7ERJ3 54 aa9.89□□□□□ -0.83
DDX49-204ENST00000595858 AMELXQ99217 191 aa9.89□□□□□ -0.83
DDX49-204ENST00000595858 TMEM238LA0A1B0GVL6 79 aa9.88□□□□□ -0.83
DDX49-204ENST00000595858 A6NJY4 79 aa9.88□□□□□ -0.83
DDX49-204ENST00000595858 XCL1P47992 114 aa9.88□□□□□ -0.83
DDX49-204ENST00000595858 WFDC2Q14508 124 aa9.88□□□□□ -0.83
DDX49-204ENST00000595858 A0A1B0GVY2 172 aa9.87□□□□□ -0.83
DDX49-204ENST00000595858 F8W1H4 67 aa9.87□□□□□ -0.83
DDX49-204ENST00000595858 LECT2O14960 151 aa9.87□□□□□ -0.83
DDX49-204ENST00000595858 IGLV4-69A0A075B6H9 119 aa9.87□□□□□ -0.83
DDX49-204ENST00000595858 ZNF815PA8K554 130 aa9.87□□□□□ -0.83
DDX49-204ENST00000595858 FOXI1Q12951 378 aa9.87□□□□□ -0.83
DDX49-204ENST00000595858 CD164L2Q6UWJ8 174 aa9.87□□□□□ -0.83
DDX49-204ENST00000595858 C11orf86A6NJI1 115 aa9.86□□□□□ -0.83
DDX49-204ENST00000595858 USP17L23D6RBM5 183 aa9.85□□□□□ -0.83
DDX49-204ENST00000595858 UBE2D1P51668 147 aa9.85□□□□□ -0.83
DDX49-204ENST00000595858 SCGB1D4Q6XE38 83 aa9.85□□□□□ -0.83
DDX49-204ENST00000595858 LINC00242Q5T6M2 205 aa9.84□□□□□ -0.83
DDX49-204ENST00000595858 C21orf62-AS1Q17RA5 79 aa9.83□□□□□ -0.84
DDX49-204ENST00000595858 Q8N814 137 aa9.83□□□□□ -0.84
DDX49-204ENST00000595858 SRSF9Q13242 221 aaKnown RBP eCLIP9.83□□□□□ -0.84
DDX49-204ENST00000595858 SPANXB1Q9NS25 103 aaPredicted RBP9.83□□□□□ -0.84
DDX49-204ENST00000595858 IGHV3OR16-9A0A0B4J2B5 98 aa9.82□□□□□ -0.84
DDX49-204ENST00000595858 KRTAP10-2P60368 255 aa9.82□□□□□ -0.84
DDX49-204ENST00000595858 COX7A2LO14548 114 aa9.81□□□□□ -0.84
DDX49-204ENST00000595858 COX6A2Q02221 97 aa9.81□□□□□ -0.84
DDX49-204ENST00000595858 C14orf177Q52M58 125 aa9.81□□□□□ -0.84
DDX49-204ENST00000595858 CFAP161Q6P656 301 aa9.81□□□□□ -0.84
DDX49-204ENST00000595858 FAM19A3Q7Z5A8 133 aa9.81□□□□□ -0.84
DDX49-204ENST00000595858 C5orf38Q86SI9 138 aa9.81□□□□□ -0.84
DDX49-204ENST00000595858 J3QR89 54 aa9.8□□□□□ -0.84
DDX49-204ENST00000595858 RPL24P83731 157 aaKnown RBP9.8□□□□□ -0.84
DDX49-204ENST00000595858 C15orf56Q8N910 161 aa9.8□□□□□ -0.84
DDX49-204ENST00000595858 PLEKHB2Q96CS7 222 aa9.8□□□□□ -0.84
DDX49-204ENST00000595858 PGPEP1Q9NXJ5 209 aa9.8□□□□□ -0.84
DDX49-204ENST00000595858 DNAH11Q96DT5 4516 aa9.79□□□□□ -0.84
DDX49-204ENST00000595858 A0A0J9YXV3 536 aa9.79□□□□□ -0.84
DDX49-204ENST00000595858 FUSP35637 526 aaKnown RBP eCLIP9.79□□□□□ -0.84
DDX49-204ENST00000595858 TMEM170BQ5T4T1 132 aa9.79□□□□□ -0.84
DDX49-204ENST00000595858 LYRM7Q5U5X0 104 aa9.79□□□□□ -0.84
DDX49-204ENST00000595858 PKD1P98161 4303 aa9.79□□□□□ -0.84
DDX49-204ENST00000595858 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.79□□□□□ -0.84
DDX49-204ENST00000595858 MALP21145 153 aa9.79□□□□□ -0.84
DDX49-204ENST00000595858 IGHV1-58A0A0C4DH39 117 aa9.78□□□□□ -0.84
DDX49-204ENST00000595858 H3BMG7 143 aa9.78□□□□□ -0.84
DDX49-204ENST00000595858 J3QQQ9 107 aa9.78□□□□□ -0.84
DDX49-204ENST00000595858 NTN5Q8WTR8 489 aaPredicted RBP9.78□□□□□ -0.84
DDX49-204ENST00000595858 A0A087WZ39 114 aa9.77□□□□□ -0.85
DDX49-204ENST00000595858 TINCRA0A1B0GVN0 87 aa9.77□□□□□ -0.85
DDX49-204ENST00000595858 LGALS3P17931 250 aaKnown RBP9.77□□□□□ -0.85
DDX49-204ENST00000595858 HERVK_113P63121 156 aa9.77□□□□□ -0.85
DDX49-204ENST00000595858 GEMIN7Q9H840 131 aaKnown RBP9.77□□□□□ -0.85
DDX49-204ENST00000595858 EPPK1P58107 5090 aaKnown RBP9.77□□□□□ -0.85
DDX49-204ENST00000595858 LEPROTO15243 131 aa9.76□□□□□ -0.85
DDX49-204ENST00000595858 HIGD2BQ4VC39 106 aa9.76□□□□□ -0.85
DDX49-204ENST00000595858 TMEM223A0PJW6 202 aa9.76□□□□□ -0.85
DDX49-204ENST00000595858 CDKN2A-AS1Q9UH64 79 aa9.76□□□□□ -0.85
DDX49-204ENST00000595858 HECTD4Q9Y4D8 3996 aa9.75□□□□□ -0.85
DDX49-204ENST00000595858 GVQW2A0A096LPI5 108 aaPredicted RBP9.75□□□□□ -0.85
DDX49-204ENST00000595858 IGLV5-52A0A0A0MRZ9 124 aa9.75□□□□□ -0.85
DDX49-204ENST00000595858 APOMO95445 188 aa9.75□□□□□ -0.85
DDX49-204ENST00000595858 PRO0461Q9UI25 63 aa9.75□□□□□ -0.85
DDX49-204ENST00000595858 TSPEAR-AS2P59090 65 aa9.74□□□□□ -0.85
DDX49-204ENST00000595858 IGHV3-64A0A075B6Q5 118 aa9.74□□□□□ -0.85
DDX49-204ENST00000595858 C16orf90A8MZG2 172 aa9.74□□□□□ -0.85
DDX49-204ENST00000595858 TSPAN13O95857 204 aa9.74□□□□□ -0.85
DDX49-204ENST00000595858 LINC01561Q8N1V8 128 aa9.74□□□□□ -0.85
DDX49-204ENST00000595858 TRBV20-1A0A075B6N2 111 aa9.73□□□□□ -0.85
DDX49-204ENST00000595858 IGLV5-45A0A087WSX0 123 aa9.73□□□□□ -0.85
DDX49-204ENST00000595858 SLPIP03973 132 aa9.73□□□□□ -0.85
DDX49-204ENST00000595858 LINC00526Q96FQ7 95 aa9.73□□□□□ -0.85
DDX49-204ENST00000595858 PKHD1P08F94 4074 aa9.73□□□□□ -0.85
DDX49-204ENST00000595858 ZNF561-AS1K7EIQ3 104 aa9.72□□□□□ -0.85
DDX49-204ENST00000595858 ZNF22P17026 224 aaPredicted RBP9.72□□□□□ -0.85
DDX49-204ENST00000595858 CNBPP62633 177 aaKnown RBP9.72□□□□□ -0.85
DDX49-204ENST00000595858 TMEM238C9JI98 176 aa9.71□□□□□ -0.85
DDX49-204ENST00000595858 CFC1BP0CG36 223 aa9.71□□□□□ -0.85
DDX49-204ENST00000595858 CFC1P0CG37 223 aa9.71□□□□□ -0.85
DDX49-204ENST00000595858 ETDBQ3ZM63 59 aa9.71□□□□□ -0.85
DDX49-204ENST00000595858 PRO1854Q9UHT4 67 aa9.71□□□□□ -0.85
DDX49-204ENST00000595858 SPAG11BQ08648 103 aa9.7□□□□□ -0.86
DDX49-204ENST00000595858 LOC107984156A0A0G2JMH3 177 aa9.7□□□□□ -0.86
DDX49-204ENST00000595858 ARL17AQ8IVW1 177 aa9.7□□□□□ -0.86
DDX49-204ENST00000595858 DNAH5Q8TE73 4624 aa9.7□□□□□ -0.86
DDX49-204ENST00000595858 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.69□□□□□ -0.86
DDX49-204ENST00000595858 SCGB1A1P11684 91 aa9.69□□□□□ -0.86
DDX49-204ENST00000595858 KIAA0087Q14695 138 aa9.69□□□□□ -0.86
DDX49-204ENST00000595858 LINC01620Q4KN68 170 aa9.69□□□□□ -0.86
DDX49-204ENST00000595858 C9orf163Q8N9P6 203 aa9.69□□□□□ -0.86
DDX49-204ENST00000595858 A0A0B4J2C4 111 aa9.68□□□□□ -0.86
DDX49-204ENST00000595858 SMIM1B2RUZ4 78 aa9.68□□□□□ -0.86
DDX49-204ENST00000595858 PSMB2P49721 201 aa9.68□□□□□ -0.86
DDX49-204ENST00000595858 C2orf48Q96LS8 159 aa9.68□□□□□ -0.86
DDX49-204ENST00000595858 SIGMAR1Q99720 223 aa9.68□□□□□ -0.86
DDX49-204ENST00000595858 KRTAP10-1P60331 282 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms