RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 LINC01561Q8N1V8 128 aa10.12□□□□□ -0.79
FOXA3-202ENST00000594297 IGHV3OR16-9A0A0B4J2B5 98 aa10.11□□□□□ -0.79
FOXA3-202ENST00000594297 C11orf86A6NJI1 115 aa10.11□□□□□ -0.79
FOXA3-202ENST00000594297 JOSD1Q15040 202 aaPredicted RBP10.11□□□□□ -0.79
FOXA3-202ENST00000594297 IGLV5-45A0A087WSX0 123 aa10.1□□□□□ -0.79
FOXA3-202ENST00000594297 A0A087WZ39 114 aa10.1□□□□□ -0.79
FOXA3-202ENST00000594297 KRTAP10-4P60372 401 aaPredicted RBP10.1□□□□□ -0.79
FOXA3-202ENST00000594297 COX6A2Q02221 97 aa10.1□□□□□ -0.79
FOXA3-202ENST00000594297 C5orf38Q86SI9 138 aa10.1□□□□□ -0.79
FOXA3-202ENST00000594297 CDKN2A-AS1Q9UH64 79 aa10.1□□□□□ -0.79
FOXA3-202ENST00000594297 ZNF22P17026 224 aaPredicted RBP10.09□□□□□ -0.79
FOXA3-202ENST00000594297 FOXI1Q12951 378 aa10.09□□□□□ -0.79
FOXA3-202ENST00000594297 IGHV1-58A0A0C4DH39 117 aa10.08□□□□□ -0.8
FOXA3-202ENST00000594297 OXTP01178 125 aa10.08□□□□□ -0.8
FOXA3-202ENST00000594297 WFDC2Q14508 124 aa10.08□□□□□ -0.8
FOXA3-202ENST00000594297 PRSS2P07478 247 aa10.07□□□□□ -0.8
FOXA3-202ENST00000594297 C14orf177Q52M58 125 aa10.07□□□□□ -0.8
FOXA3-202ENST00000594297 SCXQ7RTU7 201 aa10.07□□□□□ -0.8
FOXA3-202ENST00000594297 LOC105371267A0A1B0GV96 52 aa10.06□□□□□ -0.8
FOXA3-202ENST00000594297 TMEM223A0PJW6 202 aa10.05□□□□□ -0.8
FOXA3-202ENST00000594297 SPINK8P0C7L1 97 aa10.05□□□□□ -0.8
FOXA3-202ENST00000594297 S100A12P80511 92 aa10.05□□□□□ -0.8
FOXA3-202ENST00000594297 KRTAP26-1Q6PEX3 210 aa10.05□□□□□ -0.8
FOXA3-202ENST00000594297 ATOH7Q8N100 152 aa10.05□□□□□ -0.8
FOXA3-202ENST00000594297 IGHV3-64A0A075B6Q5 118 aa10.04□□□□□ -0.8
FOXA3-202ENST00000594297 ZNF561-AS1K7EIQ3 104 aa10.04□□□□□ -0.8
FOXA3-202ENST00000594297 ORAOV1Q8WV07 137 aa10.04□□□□□ -0.8
FOXA3-202ENST00000594297 PLEKHB2Q96CS7 222 aa10.04□□□□□ -0.8
FOXA3-202ENST00000594297 VAMP8Q9BV40 100 aa10.04□□□□□ -0.8
FOXA3-202ENST00000594297 C6orf226Q5I0X4 101 aa10.03□□□□□ -0.8
FOXA3-202ENST00000594297 PYY3Q5JQD4 70 aa10.03□□□□□ -0.8
FOXA3-202ENST00000594297 TOMM7Q9P0U1 55 aa10.03□□□□□ -0.8
FOXA3-202ENST00000594297 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.02□□□□□ -0.81
FOXA3-202ENST00000594297 SMIM1B2RUZ4 78 aa10.02□□□□□ -0.81
FOXA3-202ENST00000594297 USP17L23D6RBM5 183 aa10.02□□□□□ -0.81
FOXA3-202ENST00000594297 SMIM6P0DI80 62 aa10.02□□□□□ -0.81
FOXA3-202ENST00000594297 CKS1BP61024 79 aa10.02□□□□□ -0.81
FOXA3-202ENST00000594297 LINC01620Q4KN68 170 aa10.02□□□□□ -0.81
FOXA3-202ENST00000594297 SFTA2Q6UW10 78 aa10.02□□□□□ -0.81
FOXA3-202ENST00000594297 STPG4Q8N801 248 aa10.02□□□□□ -0.81
FOXA3-202ENST00000594297 E9PLD3 99 aa10.01□□□□□ -0.81
FOXA3-202ENST00000594297 F8WDY8 70 aa10.01□□□□□ -0.81
FOXA3-202ENST00000594297 LECT2O14960 151 aa10.01□□□□□ -0.81
FOXA3-202ENST00000594297 LEPROTO15243 131 aa10.01□□□□□ -0.81
FOXA3-202ENST00000594297 LGALS3P17931 250 aaKnown RBP10.01□□□□□ -0.81
FOXA3-202ENST00000594297 SPAG11BQ08648 103 aa10.01□□□□□ -0.81
FOXA3-202ENST00000594297 Q8IZM0 81 aa10.01□□□□□ -0.81
FOXA3-202ENST00000594297 COX7B2Q8TF08 81 aa10.01□□□□□ -0.81
FOXA3-202ENST00000594297 IGLV5-39A0A0G2JS06 123 aa10□□□□□ -0.81
FOXA3-202ENST00000594297 hDV102S1A0JD36 115 aa10□□□□□ -0.81
FOXA3-202ENST00000594297 CXCL5P42830 114 aa10□□□□□ -0.81
FOXA3-202ENST00000594297 J3QQQ9 107 aa9.99□□□□□ -0.81
FOXA3-202ENST00000594297 GVQW2A0A096LPI5 108 aaPredicted RBP9.98□□□□□ -0.81
FOXA3-202ENST00000594297 NMUP48645 174 aa9.98□□□□□ -0.81
FOXA3-202ENST00000594297 C2orf48Q96LS8 159 aa9.98□□□□□ -0.81
FOXA3-202ENST00000594297 MYMXA0A1B0GTQ4 84 aa9.97□□□□□ -0.81
FOXA3-202ENST00000594297 HIGD2BQ4VC39 106 aa9.97□□□□□ -0.81
FOXA3-202ENST00000594297 SPATA45Q537H7 98 aa9.97□□□□□ -0.81
FOXA3-202ENST00000594297 C15orf56Q8N910 161 aa9.97□□□□□ -0.81
FOXA3-202ENST00000594297 CIRBP-AS1Q8TBR5 109 aa9.97□□□□□ -0.81
FOXA3-202ENST00000594297 PAM16Q9Y3D7 125 aa9.97□□□□□ -0.81
FOXA3-202ENST00000594297 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.96□□□□□ -0.82
FOXA3-202ENST00000594297 NDUFA1O15239 70 aa9.96□□□□□ -0.82
FOXA3-202ENST00000594297 HNRNPA3P51991 378 aaKnown RBP9.96□□□□□ -0.82
FOXA3-202ENST00000594297 CAMK2N2Q96S95 79 aa9.96□□□□□ -0.82
FOXA3-202ENST00000594297 LINC00587B1AMM8 73 aa9.95□□□□□ -0.82
FOXA3-202ENST00000594297 HERV-K104P63124 156 aa9.95□□□□□ -0.82
FOXA3-202ENST00000594297 ANKRD39Q53RE8 183 aa9.95□□□□□ -0.82
FOXA3-202ENST00000594297 MAJINQ3KP22 176 aa9.94□□□□□ -0.82
FOXA3-202ENST00000594297 NDUFA12Q9UI09 145 aa9.94□□□□□ -0.82
FOXA3-202ENST00000594297 LRP2P98164 4655 aa9.93□□□□□ -0.82
FOXA3-202ENST00000594297 SYCNQ0VAF6 134 aa9.93□□□□□ -0.82
FOXA3-202ENST00000594297 KIAA0087Q14695 138 aa9.93□□□□□ -0.82
FOXA3-202ENST00000594297 PKIGQ9Y2B9 76 aa9.93□□□□□ -0.82
FOXA3-202ENST00000594297 ZNF815PA8K554 130 aa9.92□□□□□ -0.82
FOXA3-202ENST00000594297 CIRBPQ14011 172 aaKnown RBP9.92□□□□□ -0.82
FOXA3-202ENST00000594297 TNXBP22105 4242 aa9.92□□□□□ -0.82
FOXA3-202ENST00000594297 IGKV2D-26A0A0A0MRZ7 120 aa9.91□□□□□ -0.82
FOXA3-202ENST00000594297 TRBV30A0A0K0K1B3 111 aa9.91□□□□□ -0.82
FOXA3-202ENST00000594297 MT1HL1P0DM35 61 aa9.91□□□□□ -0.82
FOXA3-202ENST00000594297 RPL37AP61513 92 aaKnown RBP9.91□□□□□ -0.82
FOXA3-202ENST00000594297 CARD19Q96LW7 228 aa9.91□□□□□ -0.82
FOXA3-202ENST00000594297 C12orf57Q99622 126 aa9.91□□□□□ -0.82
FOXA3-202ENST00000594297 C2orf82Q6UX34 121 aa9.9□□□□□ -0.82
FOXA3-202ENST00000594297 SCGB1D4Q6XE38 83 aa9.9□□□□□ -0.82
FOXA3-202ENST00000594297 LINC00526Q96FQ7 95 aa9.9□□□□□ -0.82
FOXA3-202ENST00000594297 COX8AP10176 69 aa9.89□□□□□ -0.83
FOXA3-202ENST00000594297 CNBPP62633 177 aaKnown RBP9.89□□□□□ -0.83
FOXA3-202ENST00000594297 RNF151Q2KHN1 245 aa9.89□□□□□ -0.83
FOXA3-202ENST00000594297 MEIG1Q5JSS6 88 aa9.89□□□□□ -0.83
FOXA3-202ENST00000594297 SLC25A34Q6PIV7 304 aa9.89□□□□□ -0.83
FOXA3-202ENST00000594297 TSPEAR-AS2P59090 65 aa9.88□□□□□ -0.83
FOXA3-202ENST00000594297 UNQ6190/PRO20217Q6UXQ8 127 aa9.88□□□□□ -0.83
FOXA3-202ENST00000594297 ZNF625Q96I27 306 aaPredicted RBP9.88□□□□□ -0.83
FOXA3-202ENST00000594297 RNF213Q63HN8 5207 aa9.88□□□□□ -0.83
FOXA3-202ENST00000594297 DLEU1O43261 78 aa9.87□□□□□ -0.83
FOXA3-202ENST00000594297 COX17Q14061 63 aa9.87□□□□□ -0.83
FOXA3-202ENST00000594297 Q6ZRU5 148 aa9.87□□□□□ -0.83
FOXA3-202ENST00000594297 PCP2Q8IVA1 136 aa9.87□□□□□ -0.83
FOXA3-202ENST00000594297 LINC00518Q8N0U6 118 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms