RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 Q6ZVH6 145 aa10.17□□□□□ -0.78
VRK3-207ENST00000594092 Q8IZM0 81 aa10.17□□□□□ -0.78
VRK3-207ENST00000594092 SPANXDQ9BXN6 97 aa10.17□□□□□ -0.78
VRK3-207ENST00000594092 SPANXCQ9NY87 97 aa10.17□□□□□ -0.78
VRK3-207ENST00000594092 C6orf226Q5I0X4 101 aa10.16□□□□□ -0.78
VRK3-207ENST00000594092 MEIG1Q5JSS6 88 aa10.16□□□□□ -0.78
VRK3-207ENST00000594092 C1orf43Q9BWL3 253 aa10.16□□□□□ -0.78
VRK3-207ENST00000594092 Q9HAA7 133 aa10.16□□□□□ -0.78
VRK3-207ENST00000594092 APOMO95445 188 aa10.15□□□□□ -0.78
VRK3-207ENST00000594092 VPS13DQ5THJ4 4388 aa10.15□□□□□ -0.79
VRK3-207ENST00000594092 ADAMTSL4-AS1Q5T5F5 129 aa10.14□□□□□ -0.79
VRK3-207ENST00000594092 COX11Q9Y6N1 276 aa10.14□□□□□ -0.79
VRK3-207ENST00000594092 IGKV2D-24A0A075B6R9 120 aa10.14□□□□□ -0.79
VRK3-207ENST00000594092 RPL24P83731 157 aaKnown RBP10.14□□□□□ -0.79
VRK3-207ENST00000594092 MUSTN1Q8IVN3 82 aa10.14□□□□□ -0.79
VRK3-207ENST00000594092 KRTAP1-5Q9BYS1 174 aa10.14□□□□□ -0.79
VRK3-207ENST00000594092 K7ERJ3 54 aa10.13□□□□□ -0.79
VRK3-207ENST00000594092 CFAP161Q6P656 301 aa10.13□□□□□ -0.79
VRK3-207ENST00000594092 RAB37Q96AX2 223 aa10.13□□□□□ -0.79
VRK3-207ENST00000594092 A0A1B0GWB2 263 aa10.12□□□□□ -0.79
VRK3-207ENST00000594092 IFITM1P13164 125 aa10.12□□□□□ -0.79
VRK3-207ENST00000594092 CXCL5P42830 114 aa10.12□□□□□ -0.79
VRK3-207ENST00000594092 CKS1BP61024 79 aa10.12□□□□□ -0.79
VRK3-207ENST00000594092 KIAA0087Q14695 138 aa10.11□□□□□ -0.79
VRK3-207ENST00000594092 A0A0U1RRA0 63 aa10.1□□□□□ -0.79
VRK3-207ENST00000594092 DAND5Q8N907 189 aa10.1□□□□□ -0.79
VRK3-207ENST00000594092 COPS9Q8WXC6 57 aa10.1□□□□□ -0.79
VRK3-207ENST00000594092 A4D1N5 150 aa10.1□□□□□ -0.79
VRK3-207ENST00000594092 C9orf118A6NHY6 69 aa10.1□□□□□ -0.79
VRK3-207ENST00000594092 NPC2P61916 151 aa10.1□□□□□ -0.79
VRK3-207ENST00000594092 CASC10Q5T4H9 136 aa10.1□□□□□ -0.79
VRK3-207ENST00000594092 RMI2Q96E14 147 aa10.1□□□□□ -0.79
VRK3-207ENST00000594092 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.09□□□□□ -0.79
VRK3-207ENST00000594092 SPAG11BQ08648 103 aa10.09□□□□□ -0.79
VRK3-207ENST00000594092 NBDYA0A0U1RRE5 68 aa10.07□□□□□ -0.8
VRK3-207ENST00000594092 LINC00158P58513 81 aa10.07□□□□□ -0.8
VRK3-207ENST00000594092 TTC32Q5I0X7 151 aa10.07□□□□□ -0.8
VRK3-207ENST00000594092 C2orf82Q6UX34 121 aa10.07□□□□□ -0.8
VRK3-207ENST00000594092 C3orf84H3BNL1 204 aa10.07□□□□□ -0.8
VRK3-207ENST00000594092 H3BUT2 72 aa10.07□□□□□ -0.8
VRK3-207ENST00000594092 CFC1BP0CG36 223 aa10.07□□□□□ -0.8
VRK3-207ENST00000594092 CFC1P0CG37 223 aa10.07□□□□□ -0.8
VRK3-207ENST00000594092 C15orf56Q8N910 161 aa10.07□□□□□ -0.8
VRK3-207ENST00000594092 LINC00308Q8TCZ7 52 aa10.07□□□□□ -0.8
VRK3-207ENST00000594092 ERG28Q9UKR5 140 aa10.07□□□□□ -0.8
VRK3-207ENST00000594092 CBY1Q9Y3M2 126 aa10.07□□□□□ -0.8
VRK3-207ENST00000594092 LINC00526Q96FQ7 95 aa10.06□□□□□ -0.8
VRK3-207ENST00000594092 A0A0B4J2C4 111 aa10.05□□□□□ -0.8
VRK3-207ENST00000594092 PFN2P35080 140 aa10.05□□□□□ -0.8
VRK3-207ENST00000594092 C6orf223Q8N319 242 aa10.05□□□□□ -0.8
VRK3-207ENST00000594092 VAMP3Q15836 100 aa10.05□□□□□ -0.8
VRK3-207ENST00000594092 MIR7-3HGQ8N6C7 128 aa10.05□□□□□ -0.8
VRK3-207ENST00000594092 HIGD2BQ4VC39 106 aa10.04□□□□□ -0.8
VRK3-207ENST00000594092 NAA38Q9BRA0 125 aaKnown RBP10.04□□□□□ -0.8
VRK3-207ENST00000594092 PPDPFQ9H3Y8 114 aa10.04□□□□□ -0.8
VRK3-207ENST00000594092 PRO1854Q9UHT4 67 aa10.04□□□□□ -0.8
VRK3-207ENST00000594092 PGPEP1Q9NXJ5 209 aa10.03□□□□□ -0.8
VRK3-207ENST00000594092 A0A1W2PPM0 123 aa10.03□□□□□ -0.8
VRK3-207ENST00000594092 ZNF561-AS1K7EIQ3 104 aa10.03□□□□□ -0.8
VRK3-207ENST00000594092 EIF4EBP3O60516 100 aaPredicted RBP10.03□□□□□ -0.8
VRK3-207ENST00000594092 COX17Q14061 63 aa10.03□□□□□ -0.8
VRK3-207ENST00000594092 SOSTDC1Q6X4U4 206 aa10.03□□□□□ -0.8
VRK3-207ENST00000594092 NTN5Q8WTR8 489 aaPredicted RBP10.03□□□□□ -0.8
VRK3-207ENST00000594092 DNAH10Q8IVF4 4471 aa10.02□□□□□ -0.81
VRK3-207ENST00000594092 C10orf25Q5T742 122 aa10.02□□□□□ -0.81
VRK3-207ENST00000594092 UNQ6190/PRO20217Q6UXQ8 127 aa10.02□□□□□ -0.81
VRK3-207ENST00000594092 GVQW2A0A096LPI5 108 aaPredicted RBP10.01□□□□□ -0.81
VRK3-207ENST00000594092 M0R2N4 97 aa10.01□□□□□ -0.81
VRK3-207ENST00000594092 USP17L23D6RBM5 183 aa10□□□□□ -0.81
VRK3-207ENST00000594092 TSPAN13O95857 204 aa10□□□□□ -0.81
VRK3-207ENST00000594092 FABP2P12104 132 aa10□□□□□ -0.81
VRK3-207ENST00000594092 UBE2V1Q13404 147 aa10□□□□□ -0.81
VRK3-207ENST00000594092 KMT2AQ03164 3969 aa10□□□□□ -0.81
VRK3-207ENST00000594092 ALMS1Q8TCU4 4167 aa10□□□□□ -0.81
VRK3-207ENST00000594092 LY6G6CO95867 125 aa10□□□□□ -0.81
VRK3-207ENST00000594092 LINC00476Q8WZB0 136 aa10□□□□□ -0.81
VRK3-207ENST00000594092 C2orf48Q96LS8 159 aa9.99□□□□□ -0.81
VRK3-207ENST00000594092 PSCAO43653 123 aa9.98□□□□□ -0.81
VRK3-207ENST00000594092 C9orf116Q5BN46 136 aaPredicted RBP9.98□□□□□ -0.81
VRK3-207ENST00000594092 Q6ZR54 194 aa9.98□□□□□ -0.81
VRK3-207ENST00000594092 CAMK2N2Q96S95 79 aa9.98□□□□□ -0.81
VRK3-207ENST00000594092 DNAH6Q9C0G6 4158 aa9.98□□□□□ -0.81
VRK3-207ENST00000594092 LECT2O14960 151 aa9.98□□□□□ -0.81
VRK3-207ENST00000594092 SND1-IT1Q9HBX3 110 aa9.98□□□□□ -0.81
VRK3-207ENST00000594092 Q6ZRN7 208 aaPredicted RBP9.97□□□□□ -0.81
VRK3-207ENST00000594092 C6orf48Q9UBA6 75 aa9.97□□□□□ -0.81
VRK3-207ENST00000594092 TRBV30A0A0K0K1B3 111 aa9.96□□□□□ -0.81
VRK3-207ENST00000594092 GAGE10A6NGK3 116 aa9.96□□□□□ -0.81
VRK3-207ENST00000594092 F8WDY8 70 aa9.96□□□□□ -0.81
VRK3-207ENST00000594092 WFDC2Q14508 124 aa9.96□□□□□ -0.81
VRK3-207ENST00000594092 Q1RN00 199 aa9.96□□□□□ -0.81
VRK3-207ENST00000594092 Q6ZRU5 148 aa9.96□□□□□ -0.81
VRK3-207ENST00000594092 GTF2H5Q6ZYL4 71 aa9.96□□□□□ -0.81
VRK3-207ENST00000594092 SPCS1Q9Y6A9 102 aa9.96□□□□□ -0.81
VRK3-207ENST00000594092 H7C2G1 150 aa9.96□□□□□ -0.82
VRK3-207ENST00000594092 K7EP34 96 aa9.96□□□□□ -0.82
VRK3-207ENST00000594092 LOC107984156A0A0G2JMH3 177 aa9.94□□□□□ -0.82
VRK3-207ENST00000594092 RPL13AP40429 203 aaKnown RBP9.94□□□□□ -0.82
VRK3-207ENST00000594092 LYRM7Q5U5X0 104 aa9.94□□□□□ -0.82
VRK3-207ENST00000594092 ARL17AQ8IVW1 177 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms