RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 AGRNO00468 2067 aa7.04□□□□□ -1.28
LIG3-216ENST00000593099 TMEM256-PLSCR3K7ERE1 68 aa7.04□□□□□ -1.28
LIG3-216ENST00000593099 KRTAP10-3P60369 221 aa7.04□□□□□ -1.28
LIG3-216ENST00000593099 CHCHD7Q9BUK0 85 aa7.04□□□□□ -1.28
LIG3-216ENST00000593099 IGLV4-3A0A075B6K6 122 aa7.03□□□□□ -1.28
LIG3-216ENST00000593099 TSHBP01222 138 aa7.03□□□□□ -1.28
LIG3-216ENST00000593099 NRACQ8N912 160 aa7.03□□□□□ -1.28
LIG3-216ENST00000593099 CFAP54Q96N23 3096 aa7.03□□□□□ -1.28
LIG3-216ENST00000593099 SETXQ7Z333 2677 aaKnown RBP7.03□□□□□ -1.28
LIG3-216ENST00000593099 TEX49A0A1B0GTD5 131 aa7.03□□□□□ -1.28
LIG3-216ENST00000593099 ATP5EP2Q5VTU8 51 aa7.03□□□□□ -1.28
LIG3-216ENST00000593099 SNURFQ9Y675 71 aa7.03□□□□□ -1.28
LIG3-216ENST00000593099 PYGO1Q9Y3Y4 419 aa7.03□□□□□ -1.28
LIG3-216ENST00000593099 B9D2Q9BPU9 175 aa7.02□□□□□ -1.29
LIG3-216ENST00000593099 IGKV2-24A0A0C4DH68 120 aa7.02□□□□□ -1.29
LIG3-216ENST00000593099 MDFIQ99750 246 aa7.02□□□□□ -1.29
LIG3-216ENST00000593099 JMJD7-PLA2G4BH0Y9G9 81 aa7.02□□□□□ -1.29
LIG3-216ENST00000593099 TCL1BO95988 128 aa7.02□□□□□ -1.29
LIG3-216ENST00000593099 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.01□□□□□ -1.29
LIG3-216ENST00000593099 H3BS24 57 aa7.01□□□□□ -1.29
LIG3-216ENST00000593099 CXCL6P80162 114 aa7.01□□□□□ -1.29
LIG3-216ENST00000593099 PRR4Q16378 134 aa7.01□□□□□ -1.29
LIG3-216ENST00000593099 ETDCA0A1B0GVM5 59 aa7.01□□□□□ -1.29
LIG3-216ENST00000593099 CD164L2Q6UWJ8 174 aa7.01□□□□□ -1.29
LIG3-216ENST00000593099 UFSP1Q6NVU6 142 aa7.01□□□□□ -1.29
LIG3-216ENST00000593099 NREPQ16612 68 aa7□□□□□ -1.29
LIG3-216ENST00000593099 CDKN2A-AS1Q9UH64 79 aa7□□□□□ -1.29
LIG3-216ENST00000593099 H0YGX0 51 aa7□□□□□ -1.29
LIG3-216ENST00000593099 SND1-IT1Q9HBX3 110 aa7□□□□□ -1.29
LIG3-216ENST00000593099 CELA1Q9UNI1 258 aa7□□□□□ -1.29
LIG3-216ENST00000593099 PSPHP1O15172 72 aa7□□□□□ -1.29
LIG3-216ENST00000593099 SYCNQ0VAF6 134 aa7□□□□□ -1.29
LIG3-216ENST00000593099 C11orf72Q8NBR9 251 aa7□□□□□ -1.29
LIG3-216ENST00000593099 X6R8D5 127 aa6.99□□□□□ -1.29
LIG3-216ENST00000593099 VPS13AQ96RL7 3174 aa6.99□□□□□ -1.29
LIG3-216ENST00000593099 PLAC8L1A1L4L8 177 aa6.99□□□□□ -1.29
LIG3-216ENST00000593099 LECT2O14960 151 aa6.99□□□□□ -1.29
LIG3-216ENST00000593099 FAM19A4Q96LR4 140 aa6.98□□□□□ -1.29
LIG3-216ENST00000593099 STAB1Q9NY15 2570 aa6.98□□□□□ -1.29
LIG3-216ENST00000593099 LINC00959A0A1B0GUT2 108 aa6.98□□□□□ -1.29
LIG3-216ENST00000593099 FLNCQ14315 2725 aa6.98□□□□□ -1.29
LIG3-216ENST00000593099 K7EIL1 84 aa6.98□□□□□ -1.29
LIG3-216ENST00000593099 DAND5Q8N907 189 aa6.98□□□□□ -1.29
LIG3-216ENST00000593099 UBE2D4Q9Y2X8 147 aa6.98□□□□□ -1.29
LIG3-216ENST00000593099 GCN1Q92616 2671 aaKnown RBP6.98□□□□□ -1.29
LIG3-216ENST00000593099 GAS8-AS1O95177 125 aa6.98□□□□□ -1.29
LIG3-216ENST00000593099 MIR7-3HGQ8N6C7 128 aa6.97□□□□□ -1.29
LIG3-216ENST00000593099 LYPD5Q6UWN5 251 aa6.97□□□□□ -1.29
LIG3-216ENST00000593099 TTTY13Q9BZ97 58 aa6.97□□□□□ -1.29
LIG3-216ENST00000593099 ZNF706Q9Y5V0 76 aaPredicted RBP6.97□□□□□ -1.29
LIG3-216ENST00000593099 KRTAP10-11P60412 298 aa6.96□□□□□ -1.29
LIG3-216ENST00000593099 WWC2-AS2Q96NR7 200 aa6.96□□□□□ -1.29
LIG3-216ENST00000593099 ZNF22P17026 224 aaPredicted RBP6.96□□□□□ -1.3
LIG3-216ENST00000593099 CDC42SE2Q9NRR3 84 aa6.96□□□□□ -1.3
LIG3-216ENST00000593099 COL6A5A8TX70 2615 aa6.96□□□□□ -1.3
LIG3-216ENST00000593099 ENHOQ6UWT2 76 aa6.96□□□□□ -1.3
LIG3-216ENST00000593099 LRCOL1A6NCL2 159 aa6.95□□□□□ -1.3
LIG3-216ENST00000593099 Q6ZSN1 163 aa6.95□□□□□ -1.3
LIG3-216ENST00000593099 MUC7Q8TAX7 377 aa6.95□□□□□ -1.3
LIG3-216ENST00000593099 NDUFB1O75438 58 aa6.95□□□□□ -1.3
LIG3-216ENST00000593099 FAM19A3Q7Z5A8 133 aa6.95□□□□□ -1.3
LIG3-216ENST00000593099 Q8NAQ8 132 aa6.95□□□□□ -1.3
LIG3-216ENST00000593099 C1orf134Q5TEV5 83 aa6.94□□□□□ -1.3
LIG3-216ENST00000593099 CR1P17927 2039 aa6.94□□□□□ -1.3
LIG3-216ENST00000593099 IGLV4-69A0A075B6H9 119 aa6.94□□□□□ -1.3
LIG3-216ENST00000593099 WFDC10BQ8IUB3 73 aa6.93□□□□□ -1.3
LIG3-216ENST00000593099 C19orf73Q9NVV2 129 aa6.93□□□□□ -1.3
LIG3-216ENST00000593099 NCR3O14931 201 aa6.93□□□□□ -1.3
LIG3-216ENST00000593099 WIPF1O43516 503 aa6.93□□□□□ -1.3
LIG3-216ENST00000593099 PDE6GP18545 87 aa6.93□□□□□ -1.3
LIG3-216ENST00000593099 FRYLO94915 3013 aa6.92□□□□□ -1.3
LIG3-216ENST00000593099 TRBV7-6A0A0J9YX20 115 aa6.92□□□□□ -1.3
LIG3-216ENST00000593099 H3BNG1 76 aa6.92□□□□□ -1.3
LIG3-216ENST00000593099 IBA57-AS1B1ANH7 110 aa6.92□□□□□ -1.3
LIG3-216ENST00000593099 EGFEM1PQ0D2K5 195 aa6.92□□□□□ -1.3
LIG3-216ENST00000593099 LAMA1P25391 3075 aa6.92□□□□□ -1.3
LIG3-216ENST00000593099 TMEM223A0PJW6 202 aa6.92□□□□□ -1.3
LIG3-216ENST00000593099 C7orf33Q8WU49 177 aa6.92□□□□□ -1.3
LIG3-216ENST00000593099 UBE2D1P51668 147 aa6.91□□□□□ -1.3
LIG3-216ENST00000593099 POM121L12Q8N7R1 296 aa6.91□□□□□ -1.3
LIG3-216ENST00000593099 KIF25-AS1Q9Y6Z4 181 aa6.91□□□□□ -1.3
LIG3-216ENST00000593099 MUC4Q99102 2169 aa6.91□□□□□ -1.3
LIG3-216ENST00000593099 IGLV4-60A0A075B6I1 120 aa6.91□□□□□ -1.3
LIG3-216ENST00000593099 A0A1B0GUV1 79 aa6.91□□□□□ -1.3
LIG3-216ENST00000593099 TRAV7A0A075B6U4 112 aa6.91□□□□□ -1.3
LIG3-216ENST00000593099 A0A087WZ39 114 aa6.91□□□□□ -1.3
LIG3-216ENST00000593099 VCANP13611 3396 aa6.91□□□□□ -1.3
LIG3-216ENST00000593099 XAGE1AQ9HD64 81 aa6.9□□□□□ -1.3
LIG3-216ENST00000593099 A0A0J9YXY3 114 aa6.9□□□□□ -1.31
LIG3-216ENST00000593099 IGIPA6NJ69 53 aa6.9□□□□□ -1.31
LIG3-216ENST00000593099 A8MTW9 85 aa6.9□□□□□ -1.31
LIG3-216ENST00000593099 ESRGQ1W209 222 aa6.9□□□□□ -1.31
LIG3-216ENST00000593099 DIRC1Q969H9 104 aa6.9□□□□□ -1.31
LIG3-216ENST00000593099 DMXL2Q8TDJ6 3036 aa6.9□□□□□ -1.31
LIG3-216ENST00000593099 A8MZ25 164 aa6.89□□□□□ -1.31
LIG3-216ENST00000593099 H3BQ85 93 aa6.89□□□□□ -1.31
LIG3-216ENST00000593099 DEFB105AQ8NG35 78 aa6.89□□□□□ -1.31
LIG3-216ENST00000593099 TEX15Q9BXT5 2789 aa6.89□□□□□ -1.31
LIG3-216ENST00000593099 SCXQ7RTU7 201 aa6.89□□□□□ -1.31
LIG3-216ENST00000593099 BPY2O14599 106 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms