RNA–Protein interactions for RNA: ENST00000593061.5

ILF3-223, Transcript of interleukin enhancer binding factor 3, human

TSL 3

Gene ILF3, Length 475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-223	ENST00000593061		A0A1W2PNN7	141 aa		11.98	□□□□□ -0.49
ILF3-223	ENST00000593061	HSBP1	O75506	76 aa		11.98	□□□□□ -0.49
ILF3-223	ENST00000593061	SERF1A	O75920	110 aa		11.98	□□□□□ -0.49
ILF3-223	ENST00000593061	C2orf88	Q9BSF0	95 aa		11.98	□□□□□ -0.49
ILF3-223	ENST00000593061	PDZD11	Q5EBL8	140 aa		11.97	□□□□□ -0.49
ILF3-223	ENST00000593061	LINC00173	Q6ZV60	143 aa		11.97	□□□□□ -0.49
ILF3-223	ENST00000593061	LINC00310	P59036	64 aa		11.96	□□□□□ -0.49
ILF3-223	ENST00000593061		Q6ZRP5	223 aa		11.96	□□□□□ -0.49
ILF3-223	ENST00000593061	NDUFA1	O15239	70 aa		11.95	□□□□□ -0.5
ILF3-223	ENST00000593061	ATP5L	O75964	103 aa		11.95	□□□□□ -0.5
ILF3-223	ENST00000593061	RNF151	Q2KHN1	245 aa		11.95	□□□□□ -0.5
ILF3-223	ENST00000593061	C9orf116	Q5BN46	136 aa	Predicted RBP	11.95	□□□□□ -0.5
ILF3-223	ENST00000593061	ZC2HC1B	Q5TFG8	222 aa		11.95	□□□□□ -0.5
ILF3-223	ENST00000593061	MRPL35	Q9NZE8	188 aa	Known RBP	11.95	□□□□□ -0.5
ILF3-223	ENST00000593061	UBE2D1	P51668	147 aa		11.94	□□□□□ -0.5
ILF3-223	ENST00000593061	LINC00242	Q5T6M2	205 aa		11.94	□□□□□ -0.5
ILF3-223	ENST00000593061	C10orf25	Q5T742	122 aa		11.94	□□□□□ -0.5
ILF3-223	ENST00000593061	FAM19A2	Q8N3H0	131 aa		11.94	□□□□□ -0.5
ILF3-223	ENST00000593061	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.93	□□□□□ -0.5
ILF3-223	ENST00000593061		A0A087WZ39	114 aa		11.92	□□□□□ -0.5
ILF3-223	ENST00000593061		F8WDY8	70 aa		11.92	□□□□□ -0.5
ILF3-223	ENST00000593061	NUPR1	O60356	82 aa		11.92	□□□□□ -0.5
ILF3-223	ENST00000593061	PMVK	Q15126	192 aa		11.92	□□□□□ -0.5
ILF3-223	ENST00000593061	SPINK6	Q6UWN8	80 aa		11.92	□□□□□ -0.5
ILF3-223	ENST00000593061	CST9L	Q9H4G1	147 aa		11.92	□□□□□ -0.5
ILF3-223	ENST00000593061	PHF5A	Q7RTV0	110 aa	Known RBP	11.91	□□□□□ -0.5
ILF3-223	ENST00000593061	FAM19A3	Q7Z5A8	133 aa		11.91	□□□□□ -0.5
ILF3-223	ENST00000593061	C6orf48	Q9UBA6	75 aa		11.91	□□□□□ -0.5
ILF3-223	ENST00000593061	UBR4	Q5T4S7	5183 aa		11.9	□□□□□ -0.5
ILF3-223	ENST00000593061	SEC11A	P67812	179 aa		11.9	□□□□□ -0.5
ILF3-223	ENST00000593061	LINC01600	Q96MT4	127 aa		11.9	□□□□□ -0.5
ILF3-223	ENST00000593061	KIAA0087	Q14695	138 aa		11.89	□□□□□ -0.51
ILF3-223	ENST00000593061	COA6	Q5JTJ3	125 aa	Known RBP	11.89	□□□□□ -0.51
ILF3-223	ENST00000593061	IFI27L1	Q96BM0	104 aa		11.89	□□□□□ -0.51
ILF3-223	ENST00000593061	LEPROTL1	O95214	131 aa		11.88	□□□□□ -0.51
ILF3-223	ENST00000593061	NDUFA6	P56556	154 aa		11.88	□□□□□ -0.51
ILF3-223	ENST00000593061	GAGE2E	Q4V326	116 aa		11.88	□□□□□ -0.51
ILF3-223	ENST00000593061	REG3G	Q6UW15	175 aa		11.88	□□□□□ -0.51
ILF3-223	ENST00000593061	GAGE2D	Q9UEU5	116 aa		11.88	□□□□□ -0.51
ILF3-223	ENST00000593061	PSORS1C2	Q9UIG4	136 aa		11.88	□□□□□ -0.51
ILF3-223	ENST00000593061	FAM168B	A1KXE4	195 aa		11.87	□□□□□ -0.51
ILF3-223	ENST00000593061	HERVK_113	P63121	156 aa		11.87	□□□□□ -0.51
ILF3-223	ENST00000593061	SRSF9	Q13242	221 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
ILF3-223	ENST00000593061	C2orf82	Q6UX34	121 aa		11.87	□□□□□ -0.51
ILF3-223	ENST00000593061	TLX1NB	P0CAT3	122 aa		11.86	□□□□□ -0.51
ILF3-223	ENST00000593061	GEMIN7	Q9H840	131 aa	Known RBP	11.86	□□□□□ -0.51
ILF3-223	ENST00000593061	HSPB8	Q9UJY1	196 aa		11.86	□□□□□ -0.51
ILF3-223	ENST00000593061	TINCR	A0A1B0GVN0	87 aa		11.85	□□□□□ -0.51
ILF3-223	ENST00000593061	C1orf137	Q5JT78	98 aa		11.85	□□□□□ -0.51
ILF3-223	ENST00000593061	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	11.85	□□□□□ -0.51
ILF3-223	ENST00000593061	TRAV12-1	A0A0B4J245	112 aa		11.84	□□□□□ -0.51
ILF3-223	ENST00000593061	FABP4	P15090	132 aa		11.84	□□□□□ -0.51
ILF3-223	ENST00000593061	ODF1	Q14990	250 aa		11.84	□□□□□ -0.51
ILF3-223	ENST00000593061	LINC01561	Q8N1V8	128 aa		11.84	□□□□□ -0.51
ILF3-223	ENST00000593061	PACRG	Q96M98	296 aa	Predicted RBP	11.84	□□□□□ -0.51
ILF3-223	ENST00000593061	TOMM7	Q9P0U1	55 aa		11.84	□□□□□ -0.51
ILF3-223	ENST00000593061	TRBV30	A0A0K0K1B3	111 aa		11.83	□□□□□ -0.52
ILF3-223	ENST00000593061	PRSS2	P07478	247 aa		11.82	□□□□□ -0.52
ILF3-223	ENST00000593061	IGLC3	P0DOY3	106 aa		11.82	□□□□□ -0.52
ILF3-223	ENST00000593061	CDKN2A-AS1	Q9UH64	79 aa		11.82	□□□□□ -0.52
ILF3-223	ENST00000593061	IGLV5-45	A0A087WSX0	123 aa		11.81	□□□□□ -0.52
ILF3-223	ENST00000593061	LINC00469	Q8N7U9	141 aa		11.81	□□□□□ -0.52
ILF3-223	ENST00000593061	CHTOP	Q9Y3Y2	248 aa	Known RBP	11.81	□□□□□ -0.52
ILF3-223	ENST00000593061	NDUFC2-KCTD14	E9PQ53	114 aa		11.8	□□□□□ -0.52
ILF3-223	ENST00000593061	CKS1B	P61024	79 aa		11.8	□□□□□ -0.52
ILF3-223	ENST00000593061	C6orf226	Q5I0X4	101 aa		11.79	□□□□□ -0.52
ILF3-223	ENST00000593061	KRTAP11-1	Q8IUC1	163 aa		11.79	□□□□□ -0.52
ILF3-223	ENST00000593061		M0QXV9	152 aa		11.78	□□□□□ -0.52
ILF3-223	ENST00000593061	KRTAP10-8	P60410	259 aa		11.78	□□□□□ -0.52
ILF3-223	ENST00000593061	MAP1LC3C	Q9BXW4	147 aa		11.78	□□□□□ -0.52
ILF3-223	ENST00000593061		H0Y8G0	127 aa		11.77	□□□□□ -0.53
ILF3-223	ENST00000593061		H3BRM9	83 aa		11.77	□□□□□ -0.53
ILF3-223	ENST00000593061	C9orf129	Q5T035	196 aa	Known RBP	11.77	□□□□□ -0.53
ILF3-223	ENST00000593061	KRTAP7-1	Q8IUC3	87 aa		11.77	□□□□□ -0.53
ILF3-223	ENST00000593061		Q8IZM0	81 aa		11.77	□□□□□ -0.53
ILF3-223	ENST00000593061	C11orf86	A6NJI1	115 aa		11.76	□□□□□ -0.53
ILF3-223	ENST00000593061		F8VRH5	84 aa		11.76	□□□□□ -0.53
ILF3-223	ENST00000593061	IGLV7-43	P04211	117 aa		11.76	□□□□□ -0.53
ILF3-223	ENST00000593061	S100A6	P06703	90 aa		11.76	□□□□□ -0.53
ILF3-223	ENST00000593061	UBE2B	P63146	152 aa		11.76	□□□□□ -0.53
ILF3-223	ENST00000593061	ZNF22	P17026	224 aa	Predicted RBP	11.75	□□□□□ -0.53
ILF3-223	ENST00000593061	LRP2	P98164	4655 aa		11.74	□□□□□ -0.53
ILF3-223	ENST00000593061	SMIM1	B2RUZ4	78 aa		11.74	□□□□□ -0.53
ILF3-223	ENST00000593061	SYS1-DBNDD2	H3BUS1	97 aa		11.72	□□□□□ -0.53
ILF3-223	ENST00000593061	SPINK8	P0C7L1	97 aa		11.72	□□□□□ -0.53
ILF3-223	ENST00000593061	TMEM170B	Q5T4T1	132 aa		11.72	□□□□□ -0.53
ILF3-223	ENST00000593061	HIST3H2BB	Q8N257	126 aa		11.72	□□□□□ -0.53
ILF3-223	ENST00000593061	DIRC1	Q969H9	104 aa		11.72	□□□□□ -0.53
ILF3-223	ENST00000593061	PLN	P26678	52 aa		11.71	□□□□□ -0.53
ILF3-223	ENST00000593061	XAGE1A	Q9HD64	81 aa		11.71	□□□□□ -0.53
ILF3-223	ENST00000593061	S100A2	P29034	98 aa		11.7	□□□□□ -0.54
ILF3-223	ENST00000593061	PET117	Q6UWS5	81 aa		11.7	□□□□□ -0.54
ILF3-223	ENST00000593061	IGLV5-39	A0A0G2JS06	123 aa		11.69	□□□□□ -0.54
ILF3-223	ENST00000593061	DPM2	O94777	84 aa		11.69	□□□□□ -0.54
ILF3-223	ENST00000593061	C3orf79	P0CE67	100 aa		11.69	□□□□□ -0.54
ILF3-223	ENST00000593061	COX7B2	Q8TF08	81 aa		11.69	□□□□□ -0.54
ILF3-223	ENST00000593061		H0Y9J4	135 aa		11.68	□□□□□ -0.54
ILF3-223	ENST00000593061	CXCL5	P42830	114 aa		11.68	□□□□□ -0.54
ILF3-223	ENST00000593061	KRTDAP	P60985	99 aa		11.68	□□□□□ -0.54
ILF3-223	ENST00000593061	SNRPE	P62304	92 aa	Known RBP	11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms