RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 C6orf226Q5I0X4 101 aa10.24□□□□□ -0.77
CIRBP-233ENST00000591622 Q8IZM0 81 aa10.24□□□□□ -0.77
CIRBP-233ENST00000591622 SLC7A5P1Q8MH63 180 aa10.24□□□□□ -0.77
CIRBP-233ENST00000591622 LINC00469Q8N7U9 141 aa10.24□□□□□ -0.77
CIRBP-233ENST00000591622 RAB5BP61020 215 aa10.23□□□□□ -0.77
CIRBP-233ENST00000591622 CKS1BP61024 79 aa10.23□□□□□ -0.77
CIRBP-233ENST00000591622 PRR3P79522 188 aaKnown RBP10.23□□□□□ -0.77
CIRBP-233ENST00000591622 CBLN2Q8IUK8 224 aa10.23□□□□□ -0.77
CIRBP-233ENST00000591622 IGLV5-45A0A087WSX0 123 aa10.22□□□□□ -0.77
CIRBP-233ENST00000591622 HBDP02042 147 aa10.22□□□□□ -0.77
CIRBP-233ENST00000591622 SMIM1B2RUZ4 78 aa10.21□□□□□ -0.77
CIRBP-233ENST00000591622 NDUFC2-KCTD14E9PQ53 114 aa10.21□□□□□ -0.77
CIRBP-233ENST00000591622 PMCHL1Q16048 86 aa10.21□□□□□ -0.77
CIRBP-233ENST00000591622 GAGE2EQ4V326 116 aa10.21□□□□□ -0.77
CIRBP-233ENST00000591622 GAGE2DQ9UEU5 116 aa10.21□□□□□ -0.77
CIRBP-233ENST00000591622 LRP1Q07954 4544 aaKnown RBP10.2□□□□□ -0.78
CIRBP-233ENST00000591622 PDZD11Q5EBL8 140 aa10.2□□□□□ -0.78
CIRBP-233ENST00000591622 FAM168BA1KXE4 195 aa10.18□□□□□ -0.78
CIRBP-233ENST00000591622 F8VRH5 84 aa10.18□□□□□ -0.78
CIRBP-233ENST00000591622 NDUFA6P56556 154 aa10.18□□□□□ -0.78
CIRBP-233ENST00000591622 ATP5LO75964 103 aa10.17□□□□□ -0.78
CIRBP-233ENST00000591622 IGLC3P0DOY3 106 aa10.17□□□□□ -0.78
CIRBP-233ENST00000591622 CXCL5P42830 114 aa10.17□□□□□ -0.78
CIRBP-233ENST00000591622 PHF5AQ7RTV0 110 aaKnown RBP10.17□□□□□ -0.78
CIRBP-233ENST00000591622 COX7B2Q8TF08 81 aa10.17□□□□□ -0.78
CIRBP-233ENST00000591622 CHCHD1Q96BP2 118 aaKnown RBP10.17□□□□□ -0.78
CIRBP-233ENST00000591622 PKHD1L1Q86WI1 4243 aa10.17□□□□□ -0.78
CIRBP-233ENST00000591622 H3BRM9 83 aa10.16□□□□□ -0.78
CIRBP-233ENST00000591622 SPINK8P0C7L1 97 aa10.16□□□□□ -0.78
CIRBP-233ENST00000591622 C9orf129Q5T035 196 aaKnown RBP10.15□□□□□ -0.78
CIRBP-233ENST00000591622 FAM19A5Q7Z5A7 132 aaPredicted RBP10.15□□□□□ -0.78
CIRBP-233ENST00000591622 FAT3Q8TDW7 4589 aa10.15□□□□□ -0.79
CIRBP-233ENST00000591622 BAGE3Q86Y29 109 aa10.14□□□□□ -0.79
CIRBP-233ENST00000591622 KRTAP7-1Q8IUC3 87 aa10.14□□□□□ -0.79
CIRBP-233ENST00000591622 PSORS1C2Q9UIG4 136 aa10.14□□□□□ -0.79
CIRBP-233ENST00000591622 TRGC2P03986 189 aa10.13□□□□□ -0.79
CIRBP-233ENST00000591622 SPINK6Q6UWN8 80 aa10.13□□□□□ -0.79
CIRBP-233ENST00000591622 ZNF22P17026 224 aaPredicted RBP10.12□□□□□ -0.79
CIRBP-233ENST00000591622 SRSF9Q13242 221 aaKnown RBP eCLIP10.12□□□□□ -0.79
CIRBP-233ENST00000591622 IGLV5-39A0A0G2JS06 123 aa10.11□□□□□ -0.79
CIRBP-233ENST00000591622 M0QXV9 152 aa10.11□□□□□ -0.79
CIRBP-233ENST00000591622 XAGE1AQ9HD64 81 aa10.11□□□□□ -0.79
CIRBP-233ENST00000591622 HSBP1O75506 76 aa10.1□□□□□ -0.79
CIRBP-233ENST00000591622 C11orf86A6NJI1 115 aa10.09□□□□□ -0.79
CIRBP-233ENST00000591622 COLCA2A8K830 154 aa10.09□□□□□ -0.79
CIRBP-233ENST00000591622 C1orf137Q5JT78 98 aa10.09□□□□□ -0.79
CIRBP-233ENST00000591622 KRTAP11-1Q8IUC1 163 aa10.09□□□□□ -0.79
CIRBP-233ENST00000591622 IFI27L1Q96BM0 104 aa10.09□□□□□ -0.79
CIRBP-233ENST00000591622 CHTOPQ9Y3Y2 248 aaKnown RBP10.09□□□□□ -0.79
CIRBP-233ENST00000591622 MT1HL1P0DM35 61 aa10.08□□□□□ -0.8
CIRBP-233ENST00000591622 FAM19A2Q8N3H0 131 aa10.08□□□□□ -0.8
CIRBP-233ENST00000591622 TRAV12-1A0A0B4J245 112 aa10.07□□□□□ -0.8
CIRBP-233ENST00000591622 TMEM170BQ5T4T1 132 aa10.07□□□□□ -0.8
CIRBP-233ENST00000591622 SERTAD4-AS1Q5TG53 156 aa10.07□□□□□ -0.8
CIRBP-233ENST00000591622 UBE2BP63146 152 aa10.06□□□□□ -0.8
CIRBP-233ENST00000591622 REG3GQ6UW15 175 aa10.06□□□□□ -0.8
CIRBP-233ENST00000591622 LINC01600Q96MT4 127 aa10.06□□□□□ -0.8
CIRBP-233ENST00000591622 SERF1AO75920 110 aa10.05□□□□□ -0.8
CIRBP-233ENST00000591622 LINC00310P59036 64 aa10.05□□□□□ -0.8
CIRBP-233ENST00000591622 C22orf24Q9Y442 160 aa10.05□□□□□ -0.8
CIRBP-233ENST00000591622 IGLV7-43P04211 117 aa10.04□□□□□ -0.8
CIRBP-233ENST00000591622 ODF1Q14990 250 aa10.04□□□□□ -0.8
CIRBP-233ENST00000591622 LEPROTL1O95214 131 aa10.02□□□□□ -0.81
CIRBP-233ENST00000591622 LBHQ53QV2 105 aaPredicted RBP10.02□□□□□ -0.81
CIRBP-233ENST00000591622 TP73-AS1Q9UF72 201 aa10.02□□□□□ -0.81
CIRBP-233ENST00000591622 PLA2G2DQ9UNK4 145 aa10.02□□□□□ -0.81
CIRBP-233ENST00000591622 TMEM223A0PJW6 202 aa10.01□□□□□ -0.81
CIRBP-233ENST00000591622 PFN2P35080 140 aa10.01□□□□□ -0.81
CIRBP-233ENST00000591622 SFTA2Q6UW10 78 aa10.01□□□□□ -0.81
CIRBP-233ENST00000591622 ERG28Q9UKR5 140 aa10.01□□□□□ -0.81
CIRBP-233ENST00000591622 NUPR1O60356 82 aa10□□□□□ -0.81
CIRBP-233ENST00000591622 SCO1O75880 301 aa10□□□□□ -0.81
CIRBP-233ENST00000591622 COX17Q14061 63 aa10□□□□□ -0.81
CIRBP-233ENST00000591622 MRPL55Q7Z7F7 128 aaKnown RBP10□□□□□ -0.81
CIRBP-233ENST00000591622 ZNF625Q96I27 306 aaPredicted RBP10□□□□□ -0.81
CIRBP-233ENST00000591622 DIRC1Q969H9 104 aa9.99□□□□□ -0.81
CIRBP-233ENST00000591622 H0Y8G0 127 aa9.98□□□□□ -0.81
CIRBP-233ENST00000591622 HSPB8Q9UJY1 196 aa9.98□□□□□ -0.81
CIRBP-233ENST00000591622 IGLV5-37A0A075B6J1 123 aa9.97□□□□□ -0.81
CIRBP-233ENST00000591622 FABP4P15090 132 aa9.97□□□□□ -0.81
CIRBP-233ENST00000591622 KRTAP10-8P60410 259 aa9.97□□□□□ -0.81
CIRBP-233ENST00000591622 SND1-IT1Q9HBX3 110 aa9.97□□□□□ -0.81
CIRBP-233ENST00000591622 H0Y9J4 135 aa9.96□□□□□ -0.82
CIRBP-233ENST00000591622 LINC00167Q96N53 147 aa9.96□□□□□ -0.82
CIRBP-233ENST00000591622 NKAPP1Q8N9T2 125 aa9.95□□□□□ -0.82
CIRBP-233ENST00000591622 RPL37AP8A6NKH3 93 aa9.94□□□□□ -0.82
CIRBP-233ENST00000591622 HIST1H2BKO60814 126 aa9.94□□□□□ -0.82
CIRBP-233ENST00000591622 HIST1H2BJP06899 126 aa9.94□□□□□ -0.82
CIRBP-233ENST00000591622 HIST1H2BOP23527 126 aa9.94□□□□□ -0.82
CIRBP-233ENST00000591622 PLNP26678 52 aa9.94□□□□□ -0.82
CIRBP-233ENST00000591622 HIST1H2BBP33778 126 aa9.94□□□□□ -0.82
CIRBP-233ENST00000591622 HIST1H2BDP58876 126 aa9.94□□□□□ -0.82
CIRBP-233ENST00000591622 HIST1H2BCP62807 126 aa9.94□□□□□ -0.82
CIRBP-233ENST00000591622 HIST2H2BEQ16778 126 aa9.94□□□□□ -0.82
CIRBP-233ENST00000591622 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.94□□□□□ -0.82
CIRBP-233ENST00000591622 HIST1H2BHQ93079 126 aa9.94□□□□□ -0.82
CIRBP-233ENST00000591622 HIST1H2BNQ99877 126 aa9.94□□□□□ -0.82
CIRBP-233ENST00000591622 HIST1H2BMQ99879 126 aa9.94□□□□□ -0.82
CIRBP-233ENST00000591622 UBR4Q5T4S7 5183 aa9.93□□□□□ -0.82
CIRBP-233ENST00000591622 GAGE10A6NGK3 116 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms